SKGI Gene Set

Dataset DepMap CRISPR Gene Dependency
Category disease or phenotype associations
Type cell line
Description Cervical Squamous Cell Carcinoma cell line (Cancer Dependency Map)
External Link https://depmap.org/portal/cell_line/ACH-001651
Similar Terms
Downloads & Tools

Genes

314 gene knockdowns changing fitness of SKGI relative to other cell lines from the DepMap CRISPR Gene Dependency Dataset.

Symbol Name Standardized Value
STXBP6 syntaxin binding protein 6 (amisyn) 7.49358
EDDM3A epididymal protein 3A 7.37528
PTGFR prostaglandin F receptor (FP) 7.03333
DEFB124 defensin, beta 124 6.62455
NTRK2 neurotrophic tyrosine kinase, receptor, type 2 6.42124
C5ORF49 chromosome 5 open reading frame 49 6.17609
ANKRD62 ankyrin repeat domain 62 6.15556
SSTR1 somatostatin receptor 1 6.13878
FAM46C family with sequence similarity 46, member C 6.10753
GPC6 glypican 6 5.96323
DGKG diacylglycerol kinase, gamma 90kDa 5.80951
GNG2 guanine nucleotide binding protein (G protein), gamma 2 5.8073
SLC11A1 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 1 5.76231
ZPBP zona pellucida binding protein 5.75909
UBE3A ubiquitin protein ligase E3A 5.43981
AGXT2 alanine--glyoxylate aminotransferase 2 5.37724
SAMD7 sterile alpha motif domain containing 7 5.30196
KRTAP10-8 keratin associated protein 10-8 5.30151
CLDN10 claudin 10 5.28809
PDYN prodynorphin 5.27046
PLA2G4B phospholipase A2, group IVB (cytosolic) 4.92695
ACP3 acid phosphatase 3 4.89779
KCNK18 potassium channel, two pore domain subfamily K, member 18 4.79111
ZER1 zyg-11 related, cell cycle regulator 4.69125
DNAJC7 DnaJ (Hsp40) homolog, subfamily C, member 7 4.65489
ZFHX2 zinc finger homeobox 2 4.65235
NEFH neurofilament, heavy polypeptide 4.58621
BCO1 beta-carotene oxygenase 1 4.57896
KIAA2022 KIAA2022 4.5292
TOX2 TOX high mobility group box family member 2 4.52228
TPTE2 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 4.48344
HSPA12B heat shock 70kD protein 12B 4.42499
IL37 interleukin 37 4.36215
NLRP13 NLR family, pyrin domain containing 13 4.34266
ITPRIPL1 inositol 1,4,5-trisphosphate receptor interacting protein-like 1 4.34239
OR10J5 olfactory receptor, family 10, subfamily J, member 5 4.31194
SLC45A2 solute carrier family 45, member 2 4.26164
RNF2 ring finger protein 2 4.25335
ZNF35 zinc finger protein 35 4.24347
BARHL1 BarH-like homeobox 1 4.22988
CHST1 carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 4.21821
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) 4.16585
PLAAT3 phospholipase A and acyltransferase 3 4.14337
DEFB116 defensin, beta 116 4.1059
FRMD7 FERM domain containing 7 4.053
GALNT16 polypeptide N-acetylgalactosaminyltransferase 16 4.05216
CBLN3 cerebellin 3 precursor 4.01068
SLC10A1 solute carrier family 10 (sodium/bile acid cotransporter), member 1 3.96818
DEFA4 defensin, alpha 4, corticostatin 3.96675
NOVA1 neuro-oncological ventral antigen 1 3.95771
TMC4 transmembrane channel-like 4 3.9429
DPEP2 dipeptidase 2 3.92174
IL16 interleukin 16 3.90685
GPRC6A G protein-coupled receptor, class C, group 6, member A 3.8829
PRM1 protamine 1 3.82632
IL25 interleukin 25 3.819
RTN1 reticulon 1 3.78001
ZNF514 zinc finger protein 514 3.77881
RETN resistin 3.77178
RHOJ ras homolog family member J 3.74346
SLC12A5 solute carrier family 12 (potassium/chloride transporter), member 5 3.73271
DIRAS3 DIRAS family, GTP-binding RAS-like 3 3.68045
MKRN3 makorin ring finger protein 3 3.67562
NTNG2 netrin G2 3.65527
BPIFB3 BPI fold containing family B, member 3 3.55594
PSME1 proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) 3.54877
OR10Q1 olfactory receptor, family 10, subfamily Q, member 1 3.53423
PTGDR prostaglandin D2 receptor (DP) 3.52049
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 3.50199
NYNRIN NYN domain and retroviral integrase containing 3.49985
GPR135 G protein-coupled receptor 135 3.49681
ZBTB8B zinc finger and BTB domain containing 8B 3.4877
TMEM182 transmembrane protein 182 3.48562
APBB1 amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65) 3.42842
KCNA3 potassium channel, voltage gated shaker related subfamily A, member 3 3.42332
SLC22A17 solute carrier family 22, member 17 3.39949
OR5AC2 olfactory receptor, family 5, subfamily AC, member 2 3.37788
DPP3 dipeptidyl-peptidase 3 3.37193
PHF21B PHD finger protein 21B 3.36268
RASSF2 Ras association (RalGDS/AF-6) domain family member 2 3.34736
KLK1 kallikrein 1 3.33709
GOLT1A golgi transport 1A 3.32849
PGLYRP3 peptidoglycan recognition protein 3 3.32671
CREBBP CREB binding protein 3.31605
SPTBN5 spectrin, beta, non-erythrocytic 5 3.2878
ZNF208 zinc finger protein 208 3.27544
ZNF493 zinc finger protein 493 3.24789
FAM167A family with sequence similarity 167, member A 3.23723
IRX1 iroquois homeobox 1 3.23678
LYG1 lysozyme G-like 1 3.23636
CLSTN2 calsyntenin 2 3.20165
FABP12 fatty acid binding protein 12 3.10988
ZNF675 zinc finger protein 675 3.10868
GSTM4 glutathione S-transferase mu 4 3.08804
EPS8L3 EPS8-like 3 3.08426
GP9 glycoprotein IX (platelet) 3.05657
KIAA1755 KIAA1755 3.04704
IFNA2 interferon, alpha 2 3.04116
TCHP trichoplein, keratin filament binding 3.02517
RNASE13 ribonuclease, RNase A family, 13 (non-active) 3.02415
KCNIP3 Kv channel interacting protein 3, calsenilin 3.02066
SLC2A8 solute carrier family 2 (facilitated glucose transporter), member 8 2.99674
CPNE6 copine VI (neuronal) 2.99447
BPIFB1 BPI fold containing family B, member 1 2.99447
OR6Q1 olfactory receptor, family 6, subfamily Q, member 1 (gene/pseudogene) 2.9773
PCDHGB3 protocadherin gamma subfamily B, 3 2.97596
XAGE2 X antigen family, member 2 2.9739
PCP2 Purkinje cell protein 2 2.96979
NRBF2 nuclear receptor binding factor 2 2.96061
SYT9 synaptotagmin IX 2.94604
CCL14 chemokine (C-C motif) ligand 14 2.94125
UBE2L6 ubiquitin-conjugating enzyme E2L 6 2.93637
GDPD5 glycerophosphodiester phosphodiesterase domain containing 5 2.93458
VWA3B von Willebrand factor A domain containing 3B 2.93401
OR10G3 olfactory receptor, family 10, subfamily G, member 3 2.92595
KHDRBS2 KH domain containing, RNA binding, signal transduction associated 2 2.91752
CD4 CD4 molecule 2.91114
PDCL2 phosducin-like 2 2.90451
KCNMB2 potassium channel subfamily M regulatory beta subunit 2 2.89644
MOV10L1 Mov10 RISC complex RNA helicase like 1 2.89437
GSTM2 glutathione S-transferase mu 2 (muscle) 2.89363
MYOZ2 myozenin 2 2.8896
C8A complement component 8, alpha polypeptide 2.87592
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 2.86501
LAT2 linker for activation of T cells family, member 2 2.86456
C1ORF94 chromosome 1 open reading frame 94 2.85592
VSTM2L V-set and transmembrane domain containing 2 like 2.84619
TSPEAR thrombospondin-type laminin G domain and EAR repeats 2.82918
SMAP2 small ArfGAP2 2.82581
SIRPB1 signal-regulatory protein beta 1 2.82559
ATP8A2 ATPase, aminophospholipid transporter, class I, type 8A, member 2 2.82467
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 2.81883
GPX5 glutathione peroxidase 5 2.80096
ECT2L epithelial cell transforming 2 like 2.79061
PTP4A3 protein tyrosine phosphatase type IVA, member 3 2.78045
TEKT4 tektin 4 2.77446
PCDHB5 protocadherin beta 5 2.76526
FOXN4 forkhead box N4 2.75097
SLC28A2 solute carrier family 28 (concentrative nucleoside transporter), member 2 2.74782
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 2.73914
RNASE1 ribonuclease, RNase A family, 1 (pancreatic) 2.73393
OR4N5 olfactory receptor, family 4, subfamily N, member 5 2.73176
MBL2 mannose-binding lectin (protein C) 2, soluble 2.7182
MSX1 msh homeobox 1 2.70923
DCAF5 DDB1 and CUL4 associated factor 5 2.68502
FABP3 fatty acid binding protein 3, muscle and heart 2.68137
TAB1 TGF-beta activated kinase 1/MAP3K7 binding protein 1 2.68041
SV2A synaptic vesicle glycoprotein 2A 2.66809
IL6ST interleukin 6 signal transducer 2.66338
INPP5J inositol polyphosphate-5-phosphatase J 2.66272
ZMYND12 zinc finger, MYND-type containing 12 2.66225
LPAR3 lysophosphatidic acid receptor 3 2.64385
GSG1L GSG1-like 2.63977
APOBEC3G apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G 2.62978
PROKR1 prokineticin receptor 1 2.6244
PTGER2 prostaglandin E receptor 2 (subtype EP2), 53kDa 2.62305
BIRC2 baculoviral IAP repeat containing 2 2.61797
GBP6 guanylate binding protein family, member 6 2.61232
NDRG2 NDRG family member 2 2.60396
CD53 CD53 molecule 2.59071
ELFN1 extracellular leucine-rich repeat and fibronectin type III domain containing 1 2.58529
IL1RN interleukin 1 receptor antagonist 2.58508
KCNE5 potassium channel, voltage gated subfamily E regulatory beta subunit 5 2.58487
RNASE12 ribonuclease, RNase A family, 12 (non-active) 2.58468
ATP4A ATPase, H+/K+ exchanging, alpha polypeptide 2.57948
ITGA7 integrin, alpha 7 2.57796
MCTP2 multiple C2 domains, transmembrane 2 2.56263
KCNB1 potassium channel, voltage gated Shab related subfamily B, member 1 2.5526
GBP5 guanylate binding protein 5 2.55161
MROH2B maestro heat-like repeat family member 2B 2.55157
NPM2 nucleophosmin/nucleoplasmin 2 2.53693
MED12L mediator complex subunit 12-like 2.53182
TTC31 tetratricopeptide repeat domain 31 2.52442
UBE2T ubiquitin-conjugating enzyme E2T 2.52278
ANKRD33B ankyrin repeat domain 33B 2.52117
KRTAP26-1 keratin associated protein 26-1 2.51873
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 2.51457
NXNL1 nucleoredoxin-like 1 2.51442
COPS7A COP9 signalosome subunit 7A 2.5109
FAM92A1 family with sequence similarity 92, member A1 2.49789
CHRNB4 cholinergic receptor, nicotinic, beta 4 (neuronal) 2.49
CCDC159 coiled-coil domain containing 159 2.48807
LPPR4 lipid phosphate phosphatase-related protein type 4 2.48761
FSIP2 fibrous sheath interacting protein 2 2.48364
EFS embryonal Fyn-associated substrate 2.48026
MAPK11 mitogen-activated protein kinase 11 2.4801
IL31RA interleukin 31 receptor A 2.47919
IFNA14 interferon, alpha 14 2.47462
PSORS1C1 psoriasis susceptibility 1 candidate 1 2.47118
ZNF674 zinc finger protein 674 2.46825
GMIP GEM interacting protein 2.46206
APBA2 amyloid beta (A4) precursor protein-binding, family A, member 2 2.46061
PROKR2 prokineticin receptor 2 2.44432
LRRC55 leucine rich repeat containing 55 2.43844
ZNF737 zinc finger protein 737 2.43765
HMP19 HMP19 protein 2.43575
WFDC12 WAP four-disulfide core domain 12 2.43492
CGN cingulin 2.42835
SLURP1 secreted LY6/PLAUR domain containing 1 2.42643
ABHD4 abhydrolase domain containing 4 2.42247
IL36A interleukin 36, alpha 2.42091
MGP matrix Gla protein 2.41945
MYT1L myelin transcription factor 1-like 2.41555
CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2.41312
WFDC5 WAP four-disulfide core domain 5 2.41259
OCA2 oculocutaneous albinism II 2.41059
HIST1H4F histone cluster 1, H4f 2.40997
DEFB134 defensin, beta 134 2.40586
RIPPLY1 ripply transcriptional repressor 1 2.39766
AP5S1 adaptor-related protein complex 5, sigma 1 subunit 2.3902
MYLK4 myosin light chain kinase family, member 4 2.38285
SPTB spectrin, beta, erythrocytic 2.37477
PPP1R9A protein phosphatase 1, regulatory subunit 9A 2.37299
NKX2-1 NK2 homeobox 1 2.3618
ZNF710 zinc finger protein 710 2.36133
PAEP progestagen-associated endometrial protein 2.3598
DOCK6 dedicator of cytokinesis 6 2.3596
DBH dopamine beta-hydroxylase (dopamine beta-monooxygenase) 2.35696
TMPRSS3 transmembrane protease, serine 3 2.35402
RASGRF1 Ras protein-specific guanine nucleotide-releasing factor 1 2.34568
SEPTIN10 septin 10 2.32077
ANG angiogenin, ribonuclease, RNase A family, 5 2.31677
SHISA6 shisa family member 6 2.31614
BTBD11 BTB (POZ) domain containing 11 2.3119
S100A8 S100 calcium binding protein A8 2.31081
H3-5 H3.5 histone 2.29993
OR10C1 olfactory receptor, family 10, subfamily C, member 1 (gene/pseudogene) 2.29991
NT5C1A 5'-nucleotidase, cytosolic IA 2.29905
CD5 CD5 molecule 2.29684
RYR3 ryanodine receptor 3 2.29595
TGM1 transglutaminase 1 2.29014
NRROS negative regulator of reactive oxygen species 2.2879
ZDHHC9 zinc finger, DHHC-type containing 9 2.28461
BEAN1 brain expressed, associated with NEDD4, 1 2.27946
GOLGA6D golgin A6 family, member D 2.27174
LRRC30 leucine rich repeat containing 30 2.26764
NGF nerve growth factor (beta polypeptide) 2.26588
OOEP oocyte expressed protein 2.26432
NCALD neurocalcin delta 2.25947
RSPH1 radial spoke head 1 homolog (Chlamydomonas) 2.25808
OR11H4 olfactory receptor, family 11, subfamily H, member 4 2.25339
FAM114A1 family with sequence similarity 114, member A1 2.25153
MRC1 mannose receptor, C type 1 2.24901
PKDREJ polycystin (PKD) family receptor for egg jelly 2.24773
RARRES2 retinoic acid receptor responder (tazarotene induced) 2 2.24501
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D 2.23942
CXCL6 chemokine (C-X-C motif) ligand 6 2.22373
DCAF4L1 DDB1 and CUL4 associated factor 4-like 1 2.21136
TRIM62 tripartite motif containing 62 2.2103
ZNF432 zinc finger protein 432 2.20861
RMDN3 regulator of microtubule dynamics 3 2.20732
MPZ myelin protein zero 2.20496
OTUD1 OTU deubiquitinase 1 2.20431
SEC14L6 SEC14-like 6 (S. cerevisiae) 2.20361
PRKD1 protein kinase D1 2.20136
PPP3R2 protein phosphatase 3, regulatory subunit B, beta 2.20057
CTSG cathepsin G 2.19916
CABS1 calcium-binding protein, spermatid-specific 1 2.19905
SLC17A1 solute carrier family 17 (organic anion transporter), member 1 2.19481
PLCH1 phospholipase C, eta 1 2.19383
UGT3A1 UDP glycosyltransferase 3 family, polypeptide A1 2.19018
SLC4A9 solute carrier family 4, sodium bicarbonate cotransporter, member 9 2.1812
OR4D9 olfactory receptor, family 4, subfamily D, member 9 2.17703
ZP1 zona pellucida glycoprotein 1 (sperm receptor) 2.17628
KRT72 keratin 72, type II 2.17611
RNF25 ring finger protein 25 2.16951
C1ORF162 chromosome 1 open reading frame 162 2.16161
OR2L5 olfactory receptor, family 2, subfamily L, member 5 2.16136
DTWD1 DTW domain containing 1 2.15701
IL17REL interleukin 17 receptor E-like 2.1562
CD8A CD8a molecule 2.15583
CMTM5 CKLF-like MARVEL transmembrane domain containing 5 2.15331
RBP3 retinol binding protein 3, interstitial 2.13789
TAF9B TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa 2.13608
SYNPO synaptopodin 2.13184
KCNV1 potassium channel, voltage gated modifier subfamily V, member 1 2.13108
HTR4 5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled 2.12712
IL4R interleukin 4 receptor 2.12011
OR1J4 olfactory receptor, family 1, subfamily J, member 4 2.11972
C1ORF228 chromosome 1 open reading frame 228 2.11584
CLDN17 claudin 17 2.11161
LZTS3 leucine zipper, putative tumor suppressor family member 3 2.10971
NRSN2 neurensin 2 2.10341
CLNK cytokine-dependent hematopoietic cell linker 2.10054
ASTL astacin-like metallo-endopeptidase (M12 family) 2.09906
BTN1A1 butyrophilin, subfamily 1, member A1 2.09088
SEPTIN14 septin 14 2.08267
CNGA3 cyclic nucleotide gated channel alpha 3 2.08226
RNASE3 ribonuclease, RNase A family, 3 2.08177
NLRP12 NLR family, pyrin domain containing 12 2.08173
SIGLEC1 sialic acid binding Ig-like lectin 1, sialoadhesin 2.08071
TXNDC9 thioredoxin domain containing 9 2.07073
EDDM3B epididymal protein 3B 2.06518
PIAS3 protein inhibitor of activated STAT, 3 2.06438
IGDCC4 immunoglobulin superfamily, DCC subclass, member 4 2.06195
PRG3 proteoglycan 3 2.06188
METTL24 methyltransferase like 24 2.05456
MYEF2 myelin expression factor 2 2.05119
PSMB11 proteasome (prosome, macropain) subunit, beta type, 11 2.04343
MAP3K7 mitogen-activated protein kinase kinase kinase 7 2.03941
LRRC71 leucine rich repeat containing 71 2.03812
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 2.03806
HSD3B2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 2.03599
RIPK3 receptor-interacting serine-threonine kinase 3 2.03131
KIAA1211L KIAA1211-like 2.03119
SULT1C2 sulfotransferase family, cytosolic, 1C, member 2 2.02324
QPRT quinolinate phosphoribosyltransferase 2.02305
ZNF177 zinc finger protein 177 2.02114
KRT27 keratin 27, type I 2.01204
ANKRD35 ankyrin repeat domain 35 2.00979
ICOSLG inducible T-cell co-stimulator ligand 2.0096
OR1G1 olfactory receptor, family 1, subfamily G, member 1 2.00578
LBP lipopolysaccharide binding protein 2.00495
USP29 ubiquitin specific peptidase 29 2.00407