SKGII Gene Set

Dataset DepMap CRISPR Gene Dependency
Category disease or phenotype associations
Type cell line
Description Cervical Squamous Cell Carcinoma cell line (Cancer Dependency Map)
External Link https://depmap.org/portal/cell_line/ACH-001652
Similar Terms
Downloads & Tools

Genes

172 gene knockdowns changing fitness of SKGII relative to other cell lines from the DepMap CRISPR Gene Dependency Dataset.

Symbol Name Standardized Value
COPS7A COP9 signalosome subunit 7A 9.28061
OSTN osteocrin 8.02185
CASP1 caspase 1, apoptosis-related cysteine peptidase 7.28107
UBE3A ubiquitin protein ligase E3A 6.99673
ZER1 zyg-11 related, cell cycle regulator 6.63562
CASP5 caspase 5, apoptosis-related cysteine peptidase 6.59811
CARD18 caspase recruitment domain family, member 18 6.36154
NFIC nuclear factor I/C (CCAAT-binding transcription factor) 6.19155
TYR tyrosinase 5.03152
PGR progesterone receptor 4.91067
B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 4.69572
CLDN16 claudin 16 4.67255
GORASP2 golgi reassembly stacking protein 2, 55kDa 4.63549
SCMH1 sex comb on midleg homolog 1 (Drosophila) 4.54519
KDM4E lysine (K)-specific demethylase 4E 4.41813
NAIF1 nuclear apoptosis inducing factor 1 4.12423
KLHDC4 kelch domain containing 4 4.12198
ATG4C autophagy related 4C, cysteine peptidase 3.95373
PHACTR4 phosphatase and actin regulator 4 3.8797
P2RY6 pyrimidinergic receptor P2Y, G-protein coupled, 6 3.87895
ASNSD1 asparagine synthetase domain containing 1 3.84235
SYT9 synaptotagmin IX 3.8123
ARHGAP29 Rho GTPase activating protein 29 3.6136
RPS6KB2 ribosomal protein S6 kinase, 70kDa, polypeptide 2 3.54248
UGCG UDP-glucose ceramide glucosyltransferase 3.53799
SURF4 surfeit 4 3.47413
ABCF3 ATP-binding cassette, sub-family F (GCN20), member 3 3.40675
OR4C12 olfactory receptor, family 4, subfamily C, member 12 3.38401
ZDHHC23 zinc finger, DHHC-type containing 23 3.33049
CNIH2 cornichon family AMPA receptor auxiliary protein 2 3.23429
IL25 interleukin 25 3.21669
OTOA otoancorin 3.19737
OR9K2 olfactory receptor, family 9, subfamily K, member 2 3.19709
LRRC51 leucine rich repeat containing 51 3.19444
ANXA8 annexin A8 3.13989
B3GNT6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 3.08245
GABRA5 gamma-aminobutyric acid (GABA) A receptor, alpha 5 3.07155
LILRB3 leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3 3.04243
KRT84 keratin 84, type II 3.0153
HIST1H4C histone cluster 1, H4c 2.95026
TLR4 toll-like receptor 4 2.92983
OR52A5 olfactory receptor, family 52, subfamily A, member 5 2.88419
C20ORF144 chromosome 20 open reading frame 144 2.88305
SEPHS1 selenophosphate synthetase 1 2.86641
TNXB tenascin XB 2.86414
TBX10 T-box 10 2.83967
SAA4 serum amyloid A4, constitutive 2.82038
GSTA2 glutathione S-transferase alpha 2 2.82013
MRGPRD MAS-related GPR, member D 2.81756
SRPK1 SRSF protein kinase 1 2.81683
ARSG arylsulfatase G 2.81034
THUMPD1 THUMP domain containing 1 2.75799
NOX4 NADPH oxidase 4 2.73646
DHCR7 7-dehydrocholesterol reductase 2.73314
SLC35A5 solute carrier family 35, member A5 2.71968
DDI1 DNA-damage inducible 1 homolog 1 (S. cerevisiae) 2.70493
TCF12 transcription factor 12 2.69892
DNAJB13 DnaJ (Hsp40) homolog, subfamily B, member 13 2.6871
DGKB diacylglycerol kinase, beta 90kDa 2.66891
CYP4F22 cytochrome P450, family 4, subfamily F, polypeptide 22 2.65082
NGF nerve growth factor (beta polypeptide) 2.64922
LAMA3 laminin, alpha 3 2.6327
TEAD4 TEA domain family member 4 2.62864
FOLR1 folate receptor 1 (adult) 2.62815
LRG1 leucine-rich alpha-2-glycoprotein 1 2.61969
TMCO6 transmembrane and coiled-coil domains 6 2.61255
MX1 MX dynamin-like GTPase 1 2.61164
TNFSF14 tumor necrosis factor (ligand) superfamily, member 14 2.60465
MPZ myelin protein zero 2.59146
DHX35 DEAH (Asp-Glu-Ala-His) box polypeptide 35 2.57284
PSD2 pleckstrin and Sec7 domain containing 2 2.57057
CRABP2 cellular retinoic acid binding protein 2 2.54552
SYT12 synaptotagmin XII 2.53802
TRIP13 thyroid hormone receptor interactor 13 2.53422
MTFR1 mitochondrial fission regulator 1 2.53418
PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 2.52575
OR13C2 olfactory receptor, family 13, subfamily C, member 2 2.51883
ARHGEF17 Rho guanine nucleotide exchange factor (GEF) 17 2.51472
MUS81 MUS81 structure-specific endonuclease subunit 2.51416
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1 2.49717
STAP1 signal transducing adaptor family member 1 2.49687
SLC25A20 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 2.4941
ATP1B2 ATPase, Na+/K+ transporting, beta 2 polypeptide 2.48662
CCDC159 coiled-coil domain containing 159 2.48369
CCDC36 coiled-coil domain containing 36 2.47751
CENPQ centromere protein Q 2.46603
VCPIP1 valosin containing protein (p97)/p47 complex interacting protein 1 2.41939
ZNF20 zinc finger protein 20 2.41652
ANAPC13 anaphase promoting complex subunit 13 2.40794
SEC31A SEC31 homolog A (S. cerevisiae) 2.40709
POTEH POTE ankyrin domain family, member H 2.40104
PLP1 proteolipid protein 1 2.40072
MCOLN3 mucolipin 3 2.39999
B4GALT2 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 2.39723
GBP6 guanylate binding protein family, member 6 2.39447
AQP5 aquaporin 5 2.38343
MMP13 matrix metallopeptidase 13 2.36275
FGF3 fibroblast growth factor 3 2.3594
LRRC32 leucine rich repeat containing 32 2.34299
CABLES1 Cdk5 and Abl enzyme substrate 1 2.32139
IVD isovaleryl-CoA dehydrogenase 2.31494
ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 2.30336
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 2.28258
MEPE matrix extracellular phosphoglycoprotein 2.27708
HDHD5 haloacid dehalogenase like hydrolase domain containing 5 2.27267
PSMB8 proteasome (prosome, macropain) subunit, beta type, 8 2.2711
VCAN versican 2.27078
CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2.25429
GPATCH3 G patch domain containing 3 2.24542
MAGEF1 melanoma antigen family F1 2.24536
ELOVL3 ELOVL fatty acid elongase 3 2.24499
COMMD9 COMM domain containing 9 2.24247
CLDN1 claudin 1 2.23977
OR4A5 olfactory receptor, family 4, subfamily A, member 5 2.23919
SETD1B SET domain containing 1B 2.23423
CWH43 cell wall biogenesis 43 C-terminal homolog (S. cerevisiae) 2.23335
ALMS1 Alstrom syndrome protein 1 2.22641
KRTAP5-9 keratin associated protein 5-9 2.21703
CELSR1 cadherin, EGF LAG seven-pass G-type receptor 1 2.19366
FAM167B family with sequence similarity 167, member B 2.1772
NAALAD2 N-acetylated alpha-linked acidic dipeptidase 2 2.17649
CYB5R1 cytochrome b5 reductase 1 2.17621
FMO1 flavin containing monooxygenase 1 2.17597
PIWIL4 piwi-like RNA-mediated gene silencing 4 2.17426
EXOC4 exocyst complex component 4 2.17295
COMMD7 COMM domain containing 7 2.16847
ERBB3 erb-b2 receptor tyrosine kinase 3 2.16025
OR4K14 olfactory receptor, family 4, subfamily K, member 14 2.15818
FAM126A family with sequence similarity 126, member A 2.1577
LRFN4 leucine rich repeat and fibronectin type III domain containing 4 2.1538
RPS6KA1 ribosomal protein S6 kinase, 90kDa, polypeptide 1 2.14542
VIT vitrin 2.14349
EVPL envoplakin 2.1384
BRAP BRCA1 associated protein 2.13168
LRRC59 leucine rich repeat containing 59 2.13129
HPS5 Hermansky-Pudlak syndrome 5 2.13019
CACYBP calcyclin binding protein 2.12879
OR7C2 olfactory receptor, family 7, subfamily C, member 2 2.12481
MYO3B myosin IIIB 2.12443
GTSE1 G-2 and S-phase expressed 1 2.12184
CYP21A2 cytochrome P450, family 21, subfamily A, polypeptide 2 2.12135
EPS8L3 EPS8-like 3 2.12123
RHO rhodopsin 2.11187
ASIC1 acid sensing (proton gated) ion channel 1 2.11125
C22ORF42 chromosome 22 open reading frame 42 2.10701
TMEM200B transmembrane protein 200B 2.10403
SEMA6B sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B 2.10174
SAMHD1 SAM domain and HD domain 1 2.09988
MATN1 matrilin 1, cartilage matrix protein 2.08893
CDC50A cell division cycle 50 P4-ATPase accessory subunit A 2.08854
OR6C74 olfactory receptor, family 6, subfamily C, member 74 2.08378
CSAD cysteine sulfinic acid decarboxylase 2.08083
SMPDL3B sphingomyelin phosphodiesterase, acid-like 3B 2.07753
WIZ widely interspaced zinc finger motifs 2.0765
WNT2B wingless-type MMTV integration site family, member 2B 2.07443
CNOT11 CCR4-NOT transcription complex, subunit 11 2.07083
KBTBD3 kelch repeat and BTB (POZ) domain containing 3 2.06964
FGF9 fibroblast growth factor 9 2.06438
ZNF644 zinc finger protein 644 2.05621
RRAGC Ras-related GTP binding C 2.05373
TMED9 transmembrane emp24 protein transport domain containing 9 2.03983
PTDSS1 phosphatidylserine synthase 1 2.03497
KRT15 keratin 15, type I 2.03102
RETREG3 reticulophagy regulator family member 3 2.03099
TAB3 TGF-beta activated kinase 1/MAP3K7 binding protein 3 2.03009
OR8I2 olfactory receptor, family 8, subfamily I, member 2 2.02409
FIS1 fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae) 2.02275
NADSYN1 NAD synthetase 1 2.01525
VSTM5 V-set and transmembrane domain containing 5 2.01474
DOP1A DOP1 leucine zipper like protein A 2.01426
OR4D9 olfactory receptor, family 4, subfamily D, member 9 2.01273
RNF121 ring finger protein 121 2.00183