SKGIIIA Gene Set

Dataset DepMap CRISPR Gene Dependency
Category disease or phenotype associations
Type cell line
Description Cervical Squamous Cell Carcinoma cell line (Cancer Dependency Map)
External Link https://depmap.org/portal/cell_line/ACH-002020
Similar Terms
Downloads & Tools

Genes

199 gene knockdowns changing fitness of SKGIIIA relative to other cell lines from the DepMap CRISPR Gene Dependency Dataset.

Symbol Name Standardized Value
ACBD5 acyl-CoA binding domain containing 5 7.1513
ZER1 zyg-11 related, cell cycle regulator 6.72569
PEX26 peroxisomal biogenesis factor 26 6.11727
KDM4A lysine (K)-specific demethylase 4A 5.854
ABCD1 ATP-binding cassette, sub-family D (ALD), member 1 5.76919
ADGRE3 adhesion G protein-coupled receptor E3 5.63117
COL8A1 collagen, type VIII, alpha 1 5.61874
PEX3 peroxisomal biogenesis factor 3 5.58035
UBE3A ubiquitin protein ligase E3A 5.421
PEX5 peroxisomal biogenesis factor 5 5.19038
PALD1 phosphatase domain containing, paladin 1 5.14895
MUSTN1 musculoskeletal, embryonic nuclear protein 1 5.1308
PEX16 peroxisomal biogenesis factor 16 4.93771
AMOT angiomotin 4.88031
PEX14 peroxisomal biogenesis factor 14 4.74677
SUCO SUN domain containing ossification factor 4.66266
PEX12 peroxisomal biogenesis factor 12 4.59819
VAMP5 vesicle-associated membrane protein 5 4.4694
PEX2 peroxisomal biogenesis factor 2 4.3964
LRRC4C leucine rich repeat containing 4C 4.31972
C3ORF18 chromosome 3 open reading frame 18 4.31468
HSF5 heat shock transcription factor family member 5 4.20802
IDH3G isocitrate dehydrogenase 3 (NAD+) gamma 4.19107
CA1 carbonic anhydrase I 4.14907
BPIFA2 BPI fold containing family A, member 2 4.14841
SEC23A Sec23 homolog A (S. cerevisiae) 4.0835
CCM2L cerebral cavernous malformation 2-like 3.94795
CCDC25 coiled-coil domain containing 25 3.91521
ACOX1 acyl-CoA oxidase 1, palmitoyl 3.82097
VAMP2 vesicle-associated membrane protein 2 (synaptobrevin 2) 3.78036
PEX13 peroxisomal biogenesis factor 13 3.68255
OR9G4 olfactory receptor, family 9, subfamily G, member 4 3.63597
FAM212B family with sequence similarity 212, member B 3.62794
TAPT1 transmembrane anterior posterior transformation 1 3.58434
GTPBP1 GTP binding protein 1 3.55747
OR6N2 olfactory receptor, family 6, subfamily N, member 2 3.53869
IQCF6 IQ motif containing F6 3.52003
LMNB1 lamin B1 3.49536
PEX19 peroxisomal biogenesis factor 19 3.4841
OPRK1 opioid receptor, kappa 1 3.44347
PEX6 peroxisomal biogenesis factor 6 3.44047
SLC4A8 solute carrier family 4, sodium bicarbonate cotransporter, member 8 3.43107
STXBP6 syntaxin binding protein 6 (amisyn) 3.38216
IQCF5 IQ motif containing F5 3.36634
MORF4L2 mortality factor 4 like 2 3.35614
TAF11 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa 3.35445
OR10J5 olfactory receptor, family 10, subfamily J, member 5 3.32603
BPIFA1 BPI fold containing family A, member 1 3.31258
GABRG3 gamma-aminobutyric acid (GABA) A receptor, gamma 3 3.28254
OR4D1 olfactory receptor, family 4, subfamily D, member 1 3.26823
MPO myeloperoxidase 3.21765
GLYCTK glycerate kinase 3.18325
PEX1 peroxisomal biogenesis factor 1 3.18126
HDAC1 histone deacetylase 1 3.17321
BRD9 bromodomain containing 9 3.11791
KRT18 keratin 18, type I 3.11275
CYP7A1 cytochrome P450, family 7, subfamily A, polypeptide 1 3.00109
MDK midkine (neurite growth-promoting factor 2) 2.99472
CLN6 ceroid-lipofuscinosis, neuronal 6, late infantile, variant 2.93158
GBE1 glucan (1,4-alpha-), branching enzyme 1 2.93086
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 2.91386
MMP10 matrix metallopeptidase 10 2.88039
TCHP trichoplein, keratin filament binding 2.87057
TP63 tumor protein p63 2.85523
CEP350 centrosomal protein 350kDa 2.83585
FOXB2 forkhead box B2 2.81118
TRMT44 tRNA methyltransferase 44 homolog (S. cerevisiae) 2.80437
BTBD10 BTB (POZ) domain containing 10 2.7961
CEP250 centrosomal protein 250kDa 2.79137
DQX1 DEAQ box RNA-dependent ATPase 1 2.78979
FAM150A family with sequence similarity 150, member A 2.78471
FADS2 fatty acid desaturase 2 2.77211
SECISBP2 SECIS binding protein 2 2.77012
ZNF594 zinc finger protein 594 2.74357
CACNA2D2 calcium channel, voltage-dependent, alpha 2/delta subunit 2 2.74274
ZNF20 zinc finger protein 20 2.73795
ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 2.73509
FTMT ferritin mitochondrial 2.73177
COLGALT2 collagen beta(1-O)galactosyltransferase 2 2.71801
C1ORF162 chromosome 1 open reading frame 162 2.71518
SSTR1 somatostatin receptor 1 2.71451
CARD18 caspase recruitment domain family, member 18 2.70846
CYP4B1 cytochrome P450, family 4, subfamily B, polypeptide 1 2.69483
ANKS6 ankyrin repeat and sterile alpha motif domain containing 6 2.68683
CNFN cornifelin 2.68167
NEFH neurofilament, heavy polypeptide 2.6785
OR5J2 olfactory receptor, family 5, subfamily J, member 2 2.66707
OR4D6 olfactory receptor, family 4, subfamily D, member 6 2.62534
LCE3B late cornified envelope 3B 2.61808
DPP3 dipeptidyl-peptidase 3 2.59256
OR4C12 olfactory receptor, family 4, subfamily C, member 12 2.58578
OR14J1 olfactory receptor, family 14, subfamily J, member 1 2.56879
TNNC1 troponin C type 1 (slow) 2.55943
NFYA nuclear transcription factor Y, alpha 2.51543
STK32B serine/threonine kinase 32B 2.50974
CYTH4 cytohesin 4 2.50583
SUN5 Sad1 and UNC84 domain containing 5 2.50327
MTRF1 mitochondrial translational release factor 1 2.50228
PEX11B peroxisomal biogenesis factor 11 beta 2.48545
KLF17 Kruppel-like factor 17 2.48491
GNGT2 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 2.48457
CTRL chymotrypsin-like 2.47757
OOEP oocyte expressed protein 2.45173
MSC musculin 2.44508
SLC22A15 solute carrier family 22, member 15 2.4387
CELF3 CUGBP, Elav-like family member 3 2.43529
ZNF341 zinc finger protein 341 2.43478
SLC18A3 solute carrier family 18 (vesicular acetylcholine transporter), member 3 2.42492
PLA2G3 phospholipase A2, group III 2.4201
FNDC8 fibronectin type III domain containing 8 2.41207
ARHGEF40 Rho guanine nucleotide exchange factor (GEF) 40 2.40573
CEP43 centrosomal protein 43 2.4057
GSTM1 glutathione S-transferase mu 1 2.40209
PXDNL peroxidasin-like 2.39337
OR8H1 olfactory receptor, family 8, subfamily H, member 1 2.39273
DNAJC19 DnaJ (Hsp40) homolog, subfamily C, member 19 2.38941
DUPD1 dual specificity phosphatase and pro isomerase domain containing 1 2.38709
PPP3R2 protein phosphatase 3, regulatory subunit B, beta 2.37558
MS4A5 membrane-spanning 4-domains, subfamily A, member 5 2.3733
IQCF3 IQ motif containing F3 2.36438
IQCF2 IQ motif containing F2 2.35637
E2F4 E2F transcription factor 4, p107/p130-binding 2.35093
LSMEM2 leucine-rich single-pass membrane protein 2 2.3448
CEP57 centrosomal protein 57kDa 2.34223
SLA2 Src-like-adaptor 2 2.33898
ZBTB20 zinc finger and BTB domain containing 20 2.33661
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 2.33355
GPR62 G protein-coupled receptor 62 2.33166
GRM2 glutamate receptor, metabotropic 2 2.32597
GAST gastrin 2.3234
TIMM8A translocase of inner mitochondrial membrane 8 homolog A (yeast) 2.30695
DEFB131 defensin, beta 131 2.30101
SCAF4 SR-related CTD-associated factor 4 2.29263
IL5 interleukin 5 2.28337
CCDC181 coiled-coil domain containing 181 2.28176
PEX10 peroxisomal biogenesis factor 10 2.2763
SLC22A9 solute carrier family 22 (organic anion transporter), member 9 2.27121
RBM18 RNA binding motif protein 18 2.27075
LCE4A late cornified envelope 4A 2.26728
CDK8 cyclin-dependent kinase 8 2.24742
HIST1H4F histone cluster 1, H4f 2.23644
CXCL9 chemokine (C-X-C motif) ligand 9 2.23043
FAM120AOS family with sequence similarity 120A opposite strand 2.22903
AJUBA ajuba LIM protein 2.22838
SETD1B SET domain containing 1B 2.2243
CADM3 cell adhesion molecule 3 2.21275
SPOCK2 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 2.20413
RBM41 RNA binding motif protein 41 2.2028
ALX3 ALX homeobox 3 2.20275
DOK1 docking protein 1, 62kDa (downstream of tyrosine kinase 1) 2.20215
MTMR4 myotubularin related protein 4 2.19685
NFKB2 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) 2.19371
FIS1 fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae) 2.18907
OR51A4 olfactory receptor, family 51, subfamily A, member 4 2.18902
BRCA2 breast cancer 2, early onset 2.18762
NAGS N-acetylglutamate synthase 2.18716
CCNC cyclin C 2.18508
BARHL2 BarH-like homeobox 2 2.18416
APLN apelin 2.1817
EPX eosinophil peroxidase 2.17839
FKBPL FK506 binding protein like 2.17483
ZNF233 zinc finger protein 233 2.17158
PCDH9 protocadherin 9 2.17154
ZNF488 zinc finger protein 488 2.1672
GATAD2B GATA zinc finger domain containing 2B 2.1625
DDX39A DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A 2.16111
ZNF239 zinc finger protein 239 2.15967
NOVA1 neuro-oncological ventral antigen 1 2.15887
GIMAP6 GTPase, IMAP family member 6 2.15085
KRT19 keratin 19, type I 2.15062
SLC44A4 solute carrier family 44, member 4 2.14985
PPM1E protein phosphatase, Mg2+/Mn2+ dependent, 1E 2.14859
DPP10 dipeptidyl-peptidase 10 (non-functional) 2.14332
PRRT1 proline-rich transmembrane protein 1 2.13767
SNTA1 syntrophin, alpha 1 2.13648
CNN2 calponin 2 2.12585
STAG2 stromal antigen 2 2.12562
HORMAD2 HORMA domain containing 2 2.12169
SPATA32 spermatogenesis associated 32 2.11573
FRG2C FSHD region gene 2 family, member C 2.09522
NKAPD1 NKAP domain containing 1 2.09187
POTEM POTE ankyrin domain family, member M 2.08751
ZNF479 zinc finger protein 479 2.06922
PPARGC1B peroxisome proliferator-activated receptor gamma, coactivator 1 beta 2.06742
CEP104 centrosomal protein 104kDa 2.06563
ATG16L2 autophagy related 16-like 2 (S. cerevisiae) 2.06089
TMEM234 transmembrane protein 234 2.05684
BICRA BRD4 interacting chromatin remodeling complex associated protein 2.04809
LRRTM1 leucine rich repeat transmembrane neuronal 1 2.04491
FLYWCH2 FLYWCH family member 2 2.04486
TAGLN3 transgelin 3 2.039
TPRX1 tetra-peptide repeat homeobox 1 2.01901
CADM4 cell adhesion molecule 4 2.01777
PCBP4 poly(rC) binding protein 4 2.01491
MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 2.01453
PGM5 phosphoglucomutase 5 2.01096
KLHL26 kelch-like family member 26 2.00547
PIEZO1 piezo-type mechanosensitive ion channel component 1 2.0022
PITX1 paired-like homeodomain 1 2.00188