SKGT4 Gene Set

Dataset DepMap CRISPR Gene Dependency
Category disease or phenotype associations
Type cell line
External Link https://depmap.org/portal/cell_line/ACH-001654
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Genes

142 gene knockdowns changing fitness of SKGT4 relative to other cell lines from the DepMap CRISPR Gene Dependency Dataset.

Symbol Name Standardized Value
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 7.761
MMD2 monocyte to macrophage differentiation-associated 2 7.18346
TGFBR1 transforming growth factor, beta receptor 1 4.62298
SUOX sulfite oxidase 4.57511
DGKA diacylglycerol kinase, alpha 80kDa 4.37948
ODF2 outer dense fiber of sperm tails 2 4.31464
ZEB1 zinc finger E-box binding homeobox 1 4.28424
IKZF4 IKAROS family zinc finger 4 (Eos) 4.25988
EDF1 endothelial differentiation-related factor 1 4.07884
FBXL12 F-box and leucine-rich repeat protein 12 3.97134
CTRB1 chymotrypsinogen B1 3.89103
ASIC1 acid sensing (proton gated) ion channel 1 3.85565
CAPRIN1 cell cycle associated protein 1 3.75723
PMEL premelanosome protein 3.6798
B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 3.66378
GPR108 G protein-coupled receptor 108 3.62395
FAM3A family with sequence similarity 3, member A 3.58242
KIF17 kinesin family member 17 3.52491
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 3.51717
SMAD3 SMAD family member 3 3.46315
UBALD1 UBA-like domain containing 1 3.43166
GPD1 glycerol-3-phosphate dehydrogenase 1 (soluble) 3.39617
SSR4 signal sequence receptor, delta 3.27335
AFMID arylformamidase 3.26739
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 3.25729
PAEP progestagen-associated endometrial protein 3.19208
NCS1 neuronal calcium sensor 1 3.07688
UGCG UDP-glucose ceramide glucosyltransferase 3.07536
MAVS mitochondrial antiviral signaling protein 3.04727
HBS1L HBS1-like translational GTPase 2.99716
MAFG v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G 2.98994
FOXM1 forkhead box M1 2.98414
OR4S1 olfactory receptor, family 4, subfamily S, member 1 2.977
MTA1 metastasis associated 1 2.96752
TRAPPC9 trafficking protein particle complex 9 2.88548
TP53BP1 tumor protein p53 binding protein 1 2.88116
EDC3 enhancer of mRNA decapping 3 2.88106
KLF10 Kruppel-like factor 10 2.85922
ERBB3 erb-b2 receptor tyrosine kinase 3 2.85724
OR10J5 olfactory receptor, family 10, subfamily J, member 5 2.8523
CLEC4G C-type lectin domain family 4, member G 2.84842
FKBP9 FK506 binding protein 9, 63 kDa 2.80331
CHST6 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6 2.79506
ESYT1 extended synaptotagmin-like protein 1 2.79322
RAF1 Raf-1 proto-oncogene, serine/threonine kinase 2.71024
SLC45A4 solute carrier family 45, member 4 2.69249
PRM2 protamine 2 2.68524
CLEC4M C-type lectin domain family 4, member M 2.67563
OR2B2 olfactory receptor, family 2, subfamily B, member 2 2.65875
PNRC2 proline-rich nuclear receptor coactivator 2 2.65699
DIS3L DIS3 like exosome 3'-5' exoribonuclease 2.65682
PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 2.65235
PPP1R14D protein phosphatase 1, regulatory (inhibitor) subunit 14D 2.64273
DCP2 decapping mRNA 2 2.63673
OR2B11 olfactory receptor, family 2, subfamily B, member 11 2.6226
NRBP2 nuclear receptor binding protein 2 2.61988
RPL41 ribosomal protein L41 2.58333
ACOX1 acyl-CoA oxidase 1, palmitoyl 2.57679
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 2.55164
GPR35 G protein-coupled receptor 35 2.53956
CANT1 calcium activated nucleotidase 1 2.51414
MARK4 MAP/microtubule affinity-regulating kinase 4 2.50403
KCNA5 potassium channel, voltage gated shaker related subfamily A, member 5 2.49964
TAS1R1 taste receptor, type 1, member 1 2.49778
QKI QKI, KH domain containing, RNA binding 2.48979
B4GALNT2 beta-1,4-N-acetyl-galactosaminyl transferase 2 2.44324
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 2.43867
LIN54 lin-54 DREAM MuvB core complex component 2.42508
GAL3ST2 galactose-3-O-sulfotransferase 2 2.42093
MCTS1 malignant T cell amplified sequence 1 2.42003
MRC2 mannose receptor, C type 2 2.41567
CD52 CD52 molecule 2.40614
HEBP1 heme binding protein 1 2.40195
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 2.395
EGFR epidermal growth factor receptor 2.3909
HDAC7 histone deacetylase 7 2.38171
NRDC nardilysin convertase 2.38137
CHRM1 cholinergic receptor, muscarinic 1 2.38043
MYPOP Myb-related transcription factor, partner of profilin 2.37873
PARN poly(A)-specific ribonuclease 2.37531
TMEM249 transmembrane protein 249 2.36837
JUNB jun B proto-oncogene 2.36158
FANCI Fanconi anemia, complementation group I 2.35742
TMEM52B transmembrane protein 52B 2.32099
EDC4 enhancer of mRNA decapping 4 2.31815
FOXK1 forkhead box K1 2.31252
OR7C1 olfactory receptor, family 7, subfamily C, member 1 2.31216
OR1G1 olfactory receptor, family 1, subfamily G, member 1 2.30582
PYM1 PYM homolog 1, exon junction complex associated factor 2.29813
TSR3 TSR3, 20S rRNA accumulation, homolog (S. cerevisiae) 2.28302
NR1H3 nuclear receptor subfamily 1, group H, member 3 2.28183
CST1 cystatin SN 2.27189
GHSR growth hormone secretagogue receptor 2.27051
OCM2 oncomodulin 2 2.25756
OR2C1 olfactory receptor, family 2, subfamily C, member 1 2.2547
SACK1H scaffolding CK1 anchoring protein H 2.25287
CSF3R colony stimulating factor 3 receptor (granulocyte) 2.24593
DLK1 delta-like 1 homolog (Drosophila) 2.24181
MFF mitochondrial fission factor 2.24107
ATMIN ATM interactor 2.23934
RMDN3 regulator of microtubule dynamics 3 2.23345
SMG9 SMG9 nonsense mediated mRNA decay factor 2.20783
NUPR1L nuclear protein, transcriptional regulator, 1-like 2.2064
HAVCR1 hepatitis A virus cellular receptor 1 2.19759
RAPGEF3 Rap guanine nucleotide exchange factor (GEF) 3 2.19562
EVPL envoplakin 2.19033
FIS1 fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae) 2.19016
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 2.18323
ZCCHC14 zinc finger, CCHC domain containing 14 2.17722
MICU1 mitochondrial calcium uptake 1 2.17335
HLA-C major histocompatibility complex, class I, C 2.16945
POC5 POC5 centriolar protein 2.16899
DEGS2 delta(4)-desaturase, sphingolipid 2 2.15458
CDC25B cell division cycle 25B 2.14692
C9ORF50 chromosome 9 open reading frame 50 2.14046
OCM oncomodulin 2.12894
RSU1 Ras suppressor protein 1 2.12711
GRK2 G protein-coupled receptor kinase 2 2.12338
UNC45A unc-45 homolog A (C. elegans) 2.12305
FRMD1 FERM domain containing 1 2.12045
SRPK2 SRSF protein kinase 2 2.12019
ADA adenosine deaminase 2.1135
RPGRIP1 retinitis pigmentosa GTPase regulator interacting protein 1 2.10857
SKIV2L superkiller viralicidic activity 2-like (S. cerevisiae) 2.10244
RESP18 regulated endocrine-specific protein 18 2.10022
IVD isovaleryl-CoA dehydrogenase 2.09617
CTC1 CTS telomere maintenance complex component 1 2.09389
C16ORF90 chromosome 16 open reading frame 90 2.07751
PSG6 pregnancy specific beta-1-glycoprotein 6 2.07199
RAB42 RAB42, member RAS oncogene family 2.06837
KLHDC10 kelch domain containing 10 2.06228
C2ORF71 chromosome 2 open reading frame 71 2.05859
DISP2 dispatched homolog 2 (Drosophila) 2.04979
PTP4A3 protein tyrosine phosphatase type IVA, member 3 2.04403
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7 2.03997
CMIP c-Maf inducing protein 2.03933
PPARG peroxisome proliferator-activated receptor gamma 2.02848
ADAMTS8 ADAM metallopeptidase with thrombospondin type 1 motif, 8 2.01587
SLC52A2 solute carrier family 52 (riboflavin transporter), member 2 2.01297
EIF4E2 eukaryotic translation initiation factor 4E family member 2 2.00954
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 2.00495
HDAC6 histone deacetylase 6 2.00244