SKIC3 Gene Set

Dataset CM4AI KOLF21J CRISPRi Gene Perturbation Atlas
Category transcriptomics
Type gene perturbation
Description SKI3 subunit of superkiller complex (NCBI Entrez Gene Database, 9652)
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Genes

373 genes differentially expressed following the SKIC3 gene perturbation from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas.

increased expression

Symbol Name Standardized Value
ART3 ADP-ribosyltransferase 3 3.12013
EFCAB12 EF-hand calcium binding domain 12 3.12013
CALHM2 calcium homeostasis modulator 2 3.12013
IL32 interleukin 32 3.12013
BTN1A1 butyrophilin, subfamily 1, member A1 3.12013
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 3.12013
ITGA10 integrin, alpha 10 3.12013
MORC1 MORC family CW-type zinc finger 1 3.12013
PARP15 poly (ADP-ribose) polymerase family, member 15 3.12013
SLC2A2 solute carrier family 2 (facilitated glucose transporter), member 2 3.12013
LRRC36 leucine rich repeat containing 36 3.12013
NRROS negative regulator of reactive oxygen species 3.12013
OCM oncomodulin 3.12013
DUSP29 dual specificity phosphatase 29 3.12013
CHRND cholinergic receptor, nicotinic, delta (muscle) 3.12013
BHLHA15 basic helix-loop-helix family, member a15 3.12013
ELL3 elongation factor RNA polymerase II-like 3 3.12013
HRH1 histamine receptor H1 3.12013
PLCXD3 phosphatidylinositol-specific phospholipase C, X domain containing 3 3.12013
ACE2 angiotensin I converting enzyme 2 3.12013
DNAI2 dynein, axonemal, intermediate chain 2 3.12013
NRG2 neuregulin 2 3.12013
PARVG parvin, gamma 3.12013
LMNTD2 lamin tail domain containing 2 3.12013
AVPR2 arginine vasopressin receptor 2 3.12013
TM4SF20 transmembrane 4 L six family member 20 3.08281
SKOR2 SKI family transcriptional corepressor 2 3.08281
OSR2 odd-skipped related transciption factor 2 3.08281
CASP4 caspase 4, apoptosis-related cysteine peptidase 3.08281
SIX3 SIX homeobox 3 3.08281
FOLR1 folate receptor 1 (adult) 3.08281
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2 3.08281
PDE6A phosphodiesterase 6A, cGMP-specific, rod, alpha 3.08281
ZNF503 zinc finger protein 503 3.08281
PLB1 phospholipase B1 3.08281
IGFL2 IGF-like family member 2 3.08281
SPINK6 serine peptidase inhibitor, Kazal type 6 3.08281
MGAM2 maltase-glucoamylase 2 (putative) 3.08281
PNMA5 paraneoplastic Ma antigen family member 5 3.08281
AIFM3 apoptosis-inducing factor, mitochondrion-associated, 3 3.08281
OLIG1 oligodendrocyte transcription factor 1 3.08281
ACOT12 acyl-CoA thioesterase 12 3.08281
AVP arginine vasopressin 3.08281
MYO1H myosin IH 3.08281
SPACA4 sperm acrosome associated 4 3.08281
FAM181B family with sequence similarity 181, member B 3.08281
TNFSF4 tumor necrosis factor (ligand) superfamily, member 4 3.08281
ITIH6 inter-alpha-trypsin inhibitor heavy chain family, member 6 3.08281
SERTM1 serine-rich and transmembrane domain containing 1 3.08281
LEP leptin 3.08281
TWIST1 twist family bHLH transcription factor 1 3.08281
BFSP2 beaded filament structural protein 2, phakinin 3.08281
KRT80 keratin 80, type II 3.08281
TAS2R1 taste receptor, type 2, member 1 3.08281
TNIP3 TNFAIP3 interacting protein 3 3.08281
MOGAT3 monoacylglycerol O-acyltransferase 3 3.08281
PECAM1 platelet/endothelial cell adhesion molecule 1 3.08281
SLC39A4 solute carrier family 39 (zinc transporter), member 4 3.08281
TRPV6 transient receptor potential cation channel, subfamily V, member 6 3.08281
MROH2B maestro heat-like repeat family member 2B 3.08281
SHE Src homology 2 domain containing E 3.08281
FOXJ1 forkhead box J1 3.08281
MISP mitotic spindle positioning 3.08281
XCL1 chemokine (C motif) ligand 1 3.08281
CFHR3 complement factor H-related 3 3.08281
CATSPERT catsper channel auxiliary subunit tau 3.08281
PLAAT4 phospholipase A and acyltransferase 4 3.08281
SQOR sulfide quinone oxidoreductase 3.08281
NFIX nuclear factor I/X (CCAAT-binding transcription factor) 3.08281
TMOD4 tropomodulin 4 (muscle) 3.08281
YPEL4 yippee-like 4 (Drosophila) 3.08281
ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 3.08281
GPX5 glutathione peroxidase 5 3.08281
ALX4 ALX homeobox 4 3.08281
UNC5CL unc-5 homolog C (C. elegans)-like 3.08281
RHCE Rh blood group, CcEe antigens 3.08281
GK3 glycerol kinase 3 3.08281
CFAP157 cilia and flagella associated protein 157 3.08281
FAM90A11 family with sequence similarity 90 member A11 3.08281
DRC5 dynein regulatory complex subunit 5 3.08281
TEKTL1 tektin like 1 3.08281
THSD8 thrombospondin type 1 domain containing 8 3.08281
STRIT1 small transmembrane regulator of ion transport 1 3.08281
LRRC8C-DT LRRC8C divergent transcript 3.08281
OOSP4B oocyte secreted protein family member 4B 3.08281
RAMACL RNA guanine-7 methyltransferase activating subunit like 3.08281
LHFPL7 LHFPL tetraspan subfamily member 7 3.08281
DEFB131B defensin beta 131B 3.08281
VXN vexin 3.08281
FMO2 flavin containing monooxygenase 2 (non-functional) 3.08281
PDF peptide deformylase (mitochondrial) 3.08281
NXPE1 neurexophilin and PC-esterase domain family, member 1 3.08281
IRF4 interferon regulatory factor 4 3.08281
CLDN2 claudin 2 3.08281
PCDHB12 protocadherin beta 12 3.08281
PCDHA7 protocadherin alpha 7 3.08281
PCDHA2 protocadherin alpha 2 3.08281
CAPN14 calpain 14 3.08281
ELAVL4 ELAV like neuron-specific RNA binding protein 4 3.08281
TBX20 T-box 20 3.08281
ARHGDIB Rho GDP dissociation inhibitor (GDI) beta 3.08281
HPR haptoglobin-related protein 3.08281
TMEM236 transmembrane protein 236 3.08281
PRG4 proteoglycan 4 3.08281
PCDHGC3 protocadherin gamma subfamily C, 3 3.08281
GDF3 growth differentiation factor 3 3.08281
LRRC72 leucine rich repeat containing 72 3.08281
ABHD15 abhydrolase domain containing 15 3.08281
VCX3B variable charge, X-linked 3B 3.08281
SASH3 SAM and SH3 domain containing 3 3.08281
UTS2 urotensin 2 3.08281
PRR19 proline rich 19 3.08281
MSX1 msh homeobox 1 3.08281
AKAP3 A kinase (PRKA) anchor protein 3 3.08281
HPX hemopexin 3.08281
C17ORF99 chromosome 17 open reading frame 99 3.08281
IGFBP7 insulin-like growth factor binding protein 7 3.08281
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) 3.08281
KISS1 KiSS-1 metastasis-suppressor 3.08281
ANKS4B ankyrin repeat and sterile alpha motif domain containing 4B 3.08281
RNF128 ring finger protein 128, E3 ubiquitin protein ligase 3.08281
A3GALT2 alpha 1,3-galactosyltransferase 2 3.08281
LRRK2 leucine-rich repeat kinase 2 3.08281
PDCL2 phosducin-like 2 3.08281
C1ORF185 chromosome 1 open reading frame 185 3.08281
CFAP47 cilia and flagella associated protein 47 3.08281
CHRNA1 cholinergic receptor, nicotinic, alpha 1 (muscle) 3.08281
IL9R interleukin 9 receptor 3.08281
MXRA5 matrix-remodelling associated 5 3.08281
MORN5 MORN repeat containing 5 3.08281
OR13A1 olfactory receptor, family 13, subfamily A, member 1 3.08281
DNAJC22 DnaJ (Hsp40) homolog, subfamily C, member 22 3.08281
BCO1 beta-carotene oxygenase 1 3.08281
SMKR1 small lysine-rich protein 1 3.08281
GOLGA6B golgin A6 family, member B 3.08281
GOLGA6A golgin A6 family, member A 3.08281
TRADD TNFRSF1A-associated via death domain 3.08281
C11ORF16 chromosome 11 open reading frame 16 3.08281
CDH10 cadherin 10, type 2 (T2-cadherin) 3.08281
NOX3 NADPH oxidase 3 3.08281
PTGIR prostaglandin I2 (prostacyclin) receptor (IP) 3.08281
ANKRD66 ankyrin repeat domain 66 3.08281
CXCR6 chemokine (C-X-C motif) receptor 6 3.08281
LYG2 lysozyme G-like 2 3.08281
DQX1 DEAQ box RNA-dependent ATPase 1 3.08281
PAGE4 P antigen family, member 4 (prostate associated) 3.08281
MRAP melanocortin 2 receptor accessory protein 3.08281
SV2C synaptic vesicle glycoprotein 2C 3.08281
GPR12 G protein-coupled receptor 12 3.08281
DRD4 dopamine receptor D4 3.08281
TCEA3 transcription elongation factor A (SII), 3 3.08281
B4GALNT1 beta-1,4-N-acetyl-galactosaminyl transferase 1 3.08281
GALP galanin-like peptide 3.08281
KIF12 kinesin family member 12 3.08281
OPTC opticin 3.08281
OR14A2 olfactory receptor, family 14, subfamily A, member 2 3.08281
IL33 interleukin 33 3.08281
TMEM215 transmembrane protein 215 3.08281
TREML1 triggering receptor expressed on myeloid cells-like 1 3.08281
HCLS1 hematopoietic cell-specific Lyn substrate 1 3.08281
PLA2G2C phospholipase A2, group IIC 3.08281
ASCL3 achaete-scute family bHLH transcription factor 3 3.08281
GPD1 glycerol-3-phosphate dehydrogenase 1 (soluble) 3.08281
PLA2G5 phospholipase A2, group V 3.08281
ZC2HC1B zinc finger, C2HC-type containing 1B 3.08281
CXORF58 chromosome X open reading frame 58 3.08281
RHOJ ras homolog family member J 3.08281
MEPE matrix extracellular phosphoglycoprotein 3.08281
LAMB3 laminin, beta 3 3.08281
IRX4 iroquois homeobox 4 3.08281
ADCY4 adenylate cyclase 4 3.08281
GPR149 G protein-coupled receptor 149 3.08281
CCDC166 coiled-coil domain containing 166 3.08281
DBX2 developing brain homeobox 2 3.08281
PRH2 proline-rich protein HaeIII subfamily 2 3.08281
TBC1D28 TBC1 domain family, member 28 3.08281
SDS serine dehydratase 3.08281
LPAR5 lysophosphatidic acid receptor 5 3.08281
EPO erythropoietin 3.08281
SLITRK1 SLIT and NTRK-like family, member 1 3.08281
PPEF2 protein phosphatase, EF-hand calcium binding domain 2 3.08281
DEFB134 defensin, beta 134 3.08281
GPR150 G protein-coupled receptor 150 3.08281
ERVV-2 endogenous retrovirus group V, member 2 3.08281
TRPM8 transient receptor potential cation channel, subfamily M, member 8 3.08281
NYX nyctalopin 3.08281
TCAP titin-cap 3.08281
CLCA1 chloride channel accessory 1 3.08281
NGLY1 N-glycanase 1 2.97567
BMERB1 bMERB domain containing 1 2.96897
GLRB glycine receptor, beta 2.89745
KIFC2 kinesin family member C2 2.88813
RCSD1 RCSD domain containing 1 2.88813
TRIM54 tripartite motif containing 54 2.88813
FBXO2 F-box protein 2 2.86568
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 2.86568
NFATC4 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4 2.72972
FGD5 FYVE, RhoGEF and PH domain containing 5 2.68237
SSTR2 somatostatin receptor 2 2.66368
ATP8B3 ATPase, aminophospholipid transporter, class I, type 8B, member 3 2.58308
RAB38 RAB38, member RAS oncogene family 2.58138
MEGF11 multiple EGF-like-domains 11 2.49334
SEC16A SEC16 homolog A (S. cerevisiae) 2.42983
RTP1 receptor (chemosensory) transporter protein 1 2.41545
FRMPD2 FERM and PDZ domain containing 2 2.41545
FAM186B family with sequence similarity 186, member B 2.41545
LZTS2 leucine zipper, putative tumor suppressor 2 2.41141
BSG basigin (Ok blood group) 2.39901
SLC41A3 solute carrier family 41, member 3 2.38838
MAPK3 mitogen-activated protein kinase 3 2.38838
XRCC1 X-ray repair complementing defective repair in Chinese hamster cells 1 2.3783
KLF9 Kruppel-like factor 9 2.3783
THBS2 thrombospondin 2 2.3783
C19ORF85 chromosome 19 open reading frame 85 2.3783
G0S2 G0/G1 switch 2 2.3783
SLC44A4 solute carrier family 44, member 4 2.37255
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease 2.37116
POU5F1 POU class 5 homeobox 1 2.37116
MASTL microtubule associated serine/threonine kinase-like 2.36169
KCNC1 potassium channel, voltage gated Shaw related subfamily C, member 1 2.3177
H2AC21 H2A clustered histone 21 2.3177
ZFP64 ZFP64 zinc finger protein 2.28085
CTDP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 2.27692
KANK4 KN motif and ankyrin repeat domains 4 2.26119
EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 2.25593
PLEKHA6 pleckstrin homology domain containing, family A member 6 2.24049
OR2A12 olfactory receptor, family 2, subfamily A, member 12 2.22557
TMEM265 transmembrane protein 265 2.20759
ATG5 autophagy related 5 2.20254
BSDC1 BSD domain containing 1 2.17522
PLEKHO1 pleckstrin homology domain containing, family O member 1 2.17175
EGFR epidermal growth factor receptor 2.15365
SELENOV selenoprotein V 2.15281
CDC20 cell division cycle 20 2.15195
SNTA1 syntrophin, alpha 1 2.13269
LTV1 LTV1 ribosome biogenesis factor 2.12828
FILIP1L filamin A interacting protein 1-like 2.12828
TRNT1 tRNA nucleotidyl transferase, CCA-adding, 1 2.12828
CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family) 2.12605
GAL galanin/GMAP prepropeptide 2.12363
TAF7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa 2.11949
AIMP2 aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 2.11347
HELB helicase (DNA) B 2.11262
FUOM fucose mutarotase 2.11262
PA2G4 proliferation-associated 2G4, 38kDa 2.1031
TRPM4 transient receptor potential cation channel, subfamily M, member 4 2.09883
EIF2B5 eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa 2.08922
CATSPERQ catsper channel auxiliary subunit theta 2.08154
IFFO1 intermediate filament family orphan 1 2.08154
VPS25 vacuolar protein sorting 25 homolog (S. cerevisiae) 2.0655
VRK2 vaccinia related kinase 2 2.06417
TMEM177 transmembrane protein 177 2.05438
PDE6B phosphodiesterase 6B, cGMP-specific, rod, beta 2.05402
CAVIN3 caveolae associated protein 3 2.03176
NRTN neurturin 2.02995
TMEM185B transmembrane protein 185B 2.02995
RRAS related RAS viral (r-ras) oncogene homolog 2.02995
NELFE negative elongation factor complex member E 2.02995
HADH hydroxyacyl-CoA dehydrogenase 2.02402
PODXL2 podocalyxin-like 2 2.01046
LLGL1 lethal giant larvae homolog 1 (Drosophila) 2.00934
ABHD13 abhydrolase domain containing 13 2.00683
PTGR1 prostaglandin reductase 1 2.00171

decreased expression

Symbol Name Standardized Value
CAPN6 calpain 6 -3.12013
SAXO1 stabilizer of axonemal microtubules 1 -3.12013
CRK v-crk avian sarcoma virus CT10 oncogene homolog -3.12013
MMP28 matrix metallopeptidase 28 -3.08281
NOTO notochord homeobox -3.08281
RNF43 ring finger protein 43 -3.08281
KCTD11 potassium channel tetramerization domain containing 11 -3.08281
TNC tenascin C -3.08281
CD164L2 CD164 sialomucin-like 2 -3.08281
ZNF829 zinc finger protein 829 -3.08281
NGB neuroglobin -3.08281
LRRC66 leucine rich repeat containing 66 -3.08281
IRF2-DT IRF2 divergent transcript -3.08281
SRC SRC proto-oncogene, non-receptor tyrosine kinase -3.08281
H2BC17 H2B clustered histone 17 -3.08281
HASPIN histone H3 associated protein kinase -3.08281
TEDC1 tubulin epsilon and delta complex 1 -3.08281
MYH3 myosin, heavy chain 3, skeletal muscle, embryonic -3.08281
GCSAM germinal center-associated, signaling and motility -3.08281
HAL histidine ammonia-lyase -3.08281
SCN7A sodium channel, voltage gated, type VII alpha subunit -3.08281
CYP2F1 cytochrome P450, family 2, subfamily F, polypeptide 1 -3.08281
RBM34 RNA binding motif protein 34 -3.08281
LTC4S leukotriene C4 synthase -3.08281
STAB1 stabilin 1 -3.08281
CRTAC1 cartilage acidic protein 1 -3.08281
SLC35F4 solute carrier family 35, member F4 -3.08281
ITGA8 integrin, alpha 8 -3.08281
ZNF703 zinc finger protein 703 -3.08281
RBPJL recombination signal binding protein for immunoglobulin kappa J region-like -3.08281
ADORA1 adenosine A1 receptor -3.08281
APOB apolipoprotein B -3.08281
AQP3 aquaporin 3 (Gill blood group) -3.08281
EFCC1 EF-hand and coiled-coil domain containing 1 -3.08281
SOCS4 suppressor of cytokine signaling 4 -3.04521
DNAAF9 dynein axonemal assembly factor 9 -3.04247
SCAF1 SR-related CTD-associated factor 1 -3.02898
ELP4 elongator acetyltransferase complex subunit 4 -2.96897
SUSD6 sushi domain containing 6 -2.95398
CASP10 caspase 10, apoptosis-related cysteine peptidase -2.94342
SNAPIN SNAP-associated protein -2.72972
GASK1A golgi associated kinase 1A -2.72153
H1-1 H1.1 linker histone, cluster member -2.69906
RGN regucalcin -2.69906
CHRNA9 cholinergic receptor, nicotinic, alpha 9 (neuronal) -2.69906
PCDHB15 protocadherin beta 15 -2.68548
GLDN gliomedin -2.68548
ZNF678 zinc finger protein 678 -2.60201
MCEE methylmalonyl CoA epimerase -2.60042
APPL1 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 -2.55197
PCBD2 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 -2.50902
TRIM16 tripartite motif containing 16 -2.49689
DCX doublecortin -2.46829
TPRG1 tumor protein p63 regulated 1 -2.45632
WWC1 WW and C2 domain containing 1 -2.45632
PDE3B phosphodiesterase 3B, cGMP-inhibited -2.45446
E2F1 E2F transcription factor 1 -2.45161
EYA1 EYA transcriptional coactivator and phosphatase 1 -2.41867
CA13 carbonic anhydrase XIII -2.40378
ILRUN inflammation and lipid regulator with UBA-like and NBR1-like domains -2.3783
TP53BP2 tumor protein p53 binding protein 2 -2.3783
CYP4Z1 cytochrome P450, family 4, subfamily Z, polypeptide 1 -2.37643
WASHC1 WASH complex subunit 1 -2.37643
TBKBP1 TBK1 binding protein 1 -2.37643
OMG oligodendrocyte myelin glycoprotein -2.35382
SCAF8 SR-related CTD-associated factor 8 -2.3434
TRAF3 TNF receptor-associated factor 3 -2.33914
PIEZO1 piezo-type mechanosensitive ion channel component 1 -2.31959
ITGA7 integrin, alpha 7 -2.3177
SLC35B4 solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4 -2.28983
LRRC8E leucine rich repeat containing 8 family, member E -2.28983
CST6 cystatin E/M -2.28983
GALR1 galanin receptor 1 -2.28008
TBC1D22A TBC1 domain family, member 22A -2.27409
RBM11 RNA binding motif protein 11 -2.26738
SCN9A sodium channel, voltage gated, type IX alpha subunit -2.21872
KCTD14 potassium channel tetramerization domain containing 14 -2.19318
SRSF1 serine/arginine-rich splicing factor 1 -2.15195
ZBTB7A zinc finger and BTB domain containing 7A -2.15195
EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa -2.15195
NEK2 NIMA-related kinase 2 -2.14911
FAXDC2 fatty acid hydroxylase domain containing 2 -2.13859
C9ORF40 chromosome 9 open reading frame 40 -2.13174
AFTPH aftiphilin -2.13174
PLPPR5 phospholipid phosphatase related 5 -2.13174
SLC4A11 solute carrier family 4, sodium borate transporter, member 11 -2.12952
GAP43 growth associated protein 43 -2.12828
SEPTIN4 septin 4 -2.12605
BPTF bromodomain PHD finger transcription factor -2.11949
FBXO31 F-box protein 31 -2.11347
MCM7 minichromosome maintenance complex component 7 -2.11321
E2F4 E2F transcription factor 4, p107/p130-binding -2.11262
RP2 retinitis pigmentosa 2 (X-linked recessive) -2.11028
TMEM14B transmembrane protein 14B -2.10193
CLIP3 CAP-GLY domain containing linker protein 3 -2.09883
REDIC1 regulator of DNA class I crossover intermediates 1 -2.07654
EFNA2 ephrin-A2 -2.07654
KRCC1 lysine-rich coiled-coil 1 -2.07654
ELAVL2 ELAV like neuron-specific RNA binding protein 2 -2.07125
KDM5B lysine (K)-specific demethylase 5B -2.04784
TEX10 testis expressed 10 -2.04722
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -2.04699
DGAT1 diacylglycerol O-acyltransferase 1 -2.04182
AASS aminoadipate-semialdehyde synthase -2.04029
NXPH1 neurexophilin 1 -2.03921
XRCC3 X-ray repair complementing defective repair in Chinese hamster cells 3 -2.02995
ALDH16A1 aldehyde dehydrogenase 16 family, member A1 -2.01545
PAM peptidylglycine alpha-amidating monooxygenase -2.01545
RBP2 retinol binding protein 2, cellular -2.00864
ZNF624 zinc finger protein 624 -2.00864