SNU-387 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
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Genes

96 genes with high or low copy number in SNU-387 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
SLC29A2 solute carrier family 29 (equilibrative nucleoside transporter), member 2 2.49065
NPAS4 neuronal PAS domain protein 4 2.49065
CD248 CD248 molecule, endosialin 2.49065
B3GNT1 2.49065
YIF1A Yip1 interacting factor homolog A (S. cerevisiae) 2.49065
PACS1 phosphofurin acidic cluster sorting protein 1 2.49065
TMEM151A transmembrane protein 151A 2.49065
RAB1B RAB1B, member RAS oncogene family 2.49065
KLC2 kinesin light chain 2 2.49065
RIN1 Ras and Rab interactor 1 2.49065
BRMS1 breast cancer metastasis suppressor 1 2.49065
CNIH2 cornichon family AMPA receptor auxiliary protein 2 2.49065
CCS copper chaperone for superoxide dismutase 2.44392
RBM14 RNA binding motif protein 14 2.44392
MRPL11 mitochondrial ribosomal protein L11 2.44392
BBS1 Bardet-Biedl syndrome 1 2.44392
ZDHHC24 zinc finger, DHHC-type containing 24 2.44392
CCDC87 coiled-coil domain containing 87 2.44392
PELI3 pellino E3 ubiquitin protein ligase family member 3 2.44392
ACTN3 actinin, alpha 3 (gene/pseudogene) 2.44392
CTSF cathepsin F 2.44392
DPP3 dipeptidyl-peptidase 3 2.41451
RBM4 RNA binding motif protein 4 2.41451
RBM4B RNA binding motif protein 4B 2.41451
SPTBN2 spectrin, beta, non-erythrocytic 2 2.41451
RBM14-RBM4 RBM14-RBM4 readthrough 2.41451
RHOD ras homolog family member D 2.39327
ALDH3B1 aldehyde dehydrogenase 3 family, member B1 2.39327
C11ORF86 chromosome 11 open reading frame 86 2.39327
RCE1 Ras converting CAAX endopeptidase 1 2.39327
MIR4691 microRNA 4691 2.39327
NDUFS8 NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) 2.39327
LRFN4 leucine rich repeat and fibronectin type III domain containing 4 2.39327
TCIRG1 T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 2.39327
C11ORF80 chromosome 11 open reading frame 80 2.39327
SYT12 synaptotagmin XII 2.39327
PC pyruvate carboxylase 2.39327
PPP1CA protein phosphatase 1, catalytic subunit, alpha isozyme 2.36889
ALDH3B2 aldehyde dehydrogenase 3 family, member B2 2.36889
ANKRD13D ankyrin repeat domain 13 family, member D 2.36889
C11ORF24 chromosome 11 open reading frame 24 2.36889
CHKA choline kinase alpha 2.36889
LOC100130987 uncharacterized LOC100130987 2.36889
SSH3 slingshot protein phosphatase 3 2.36889
CLCF1 cardiotrophin-like cytokine factor 1 2.36889
POLD4 polymerase (DNA-directed), delta 4, accessory subunit 2.36889
RAD9A RAD9 homolog A (S. pombe) 2.36889
ADRBK1 adrenergic, beta, receptor kinase 1 2.36889
UNC93B1 unc-93 homolog B1 (C. elegans) 2.36889
TBC1D10C TBC1 domain family, member 10C 2.36889
AIP aryl hydrocarbon receptor interacting protein 2.35236
PITPNM1 phosphatidylinositol transfer protein, membrane-associated 1 2.35236
CDK2AP2 cyclin-dependent kinase 2 associated protein 2 2.35236
DOC2GP double C2-like domains, gamma, pseudogene 2.35236
CABP2 calcium binding protein 2 2.35236
CARNS1 carnosine synthase 1 2.35236
RPS6KB2 ribosomal protein S6 kinase, 70kDa, polypeptide 2 2.35236
TBX10 T-box 10 2.35236
GPR152 G protein-coupled receptor 152 2.35236
CABP4 calcium binding protein 4 2.35236
PTPRCAP protein tyrosine phosphatase, receptor type, C-associated protein 2.35236
TMEM134 transmembrane protein 134 2.35236
NUDT8 nudix (nucleoside diphosphate linked moiety X)-type motif 8 2.35236
CORO1B coronin, actin binding protein, 1B 2.35236
ACY3 aminoacylase 3 2.35236
KDM2A lysine (K)-specific demethylase 2A 2.35236
SUV420H1 suppressor of variegation 4-20 homolog 1 (Drosophila) 2.35236
LRP5 low density lipoprotein receptor-related protein 5 2.3178
C11ORF72 chromosome 11 open reading frame 72 2.3178
NDUFV1 NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa 2.3178
GSTP1 glutathione S-transferase pi 1 2.3178
GAL galanin/GMAP prepropeptide 2.25904
MTL5 metallothionein-like 5, testis-specific (tesmin) 2.24845
CPT1A carnitine palmitoyltransferase 1A (liver) 2.24139
MRPL21 mitochondrial ribosomal protein L21 2.23078
IGHMBP2 immunoglobulin mu binding protein 2 2.23078
MYEOV myeloma overexpressed 2.16459
FGF3 fibroblast growth factor 3 2.16307
FGF4 fibroblast growth factor 4 2.16176
FGF19 fibroblast growth factor 19 2.1605
CCND1 cyclin D1 2.1605
ORAOV1 oral cancer overexpressed 1 2.16017
FAM86C2P family with sequence similarity 86, member A pseudogene 2.07822
PPP6R3 protein phosphatase 6, regulatory subunit 3 2.06989

low copy number

Symbol Name Standardized Value
IZUMO3 IZUMO family member 3 -2.77409
IFNA22P interferon, alpha 22, pseudogene -2.75555
IFNA5 interferon, alpha 5 -2.74973
KLHL9 kelch-like family member 9 -2.74526
ELAVL2 ELAV like neuron-specific RNA binding protein 2 -2.74526
CES1P1 carboxylesterase 1 pseudogene 1 -2.74485
IFNA6 interferon, alpha 6 -2.74032
IFNA13 interferon, alpha 13 -2.73798
IFNA2 interferon, alpha 2 -2.73608
IFNA8 interferon, alpha 8 -2.73024
IFNA1 interferon, alpha 1 -2.72828
IFNE interferon, epsilon -2.72466