SNU-387 Gene Set

Dataset GDSC Cell Line Gene Expression Profiles
Category transcriptomics
Type cell line
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Genes

278 genes with high or low expression in SNU-387 relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
SFRP5 secreted frizzled-related protein 5 3.56631
BBS1 Bardet-Biedl syndrome 1 3.4588
PDHA1 pyruvate dehydrogenase (lipoamide) alpha 1 2.86641
GRM1 glutamate receptor, metabotropic 1 2.83171
PITX2 paired-like homeodomain 2 2.73974
IQSEC1 IQ motif and Sec7 domain 1 2.59699
CHI3L1 chitinase 3-like 1 (cartilage glycoprotein-39) 2.58886
NDUFV1 NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa 2.52361
NDUFS8 NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) 2.42803
B3GNT1 2.41228
HNMT histamine N-methyltransferase 2.40513
RAB1B RAB1B, member RAS oncogene family 2.32998
HAPLN1 hyaluronan and proteoglycan link protein 1 2.32056
MAP3K15 mitogen-activated protein kinase kinase kinase 15 2.30019
EPYC epiphycan 2.28485
KLRD1 killer cell lectin-like receptor subfamily D, member 1 2.27141
AQP1 aquaporin 1 (Colton blood group) 2.25689
PPP4R2 protein phosphatase 4, regulatory subunit 2 2.17345
TMEM176B transmembrane protein 176B 2.16447
MRPL11 mitochondrial ribosomal protein L11 2.15625
COL8A2 collagen, type VIII, alpha 2 2.14952
PPP6R3 protein phosphatase 6, regulatory subunit 3 2.11781
ADCY7 adenylate cyclase 7 2.11377
ME1 malic enzyme 1, NADP(+)-dependent, cytosolic 2.10129
PPP1R12B protein phosphatase 1, regulatory subunit 12B 2.09756
ADAM28 ADAM metallopeptidase domain 28 2.08576
SLC38A3 solute carrier family 38, member 3 2.08261
LSM3 LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) 2.07404
SPARCL1 SPARC-like 1 (hevin) 2.06657
MARCO macrophage receptor with collagenous structure 2.05799
RAF1 Raf-1 proto-oncogene, serine/threonine kinase 2.04945
CDO1 cysteine dioxygenase type 1 2.03396
GALNT11 polypeptide N-acetylgalactosaminyltransferase 11 2.02736
PODNL1 podocan-like 1 2.01962
KDM2A lysine (K)-specific demethylase 2A 2.0185
HR hair growth associated 2.01656
CDK2AP2 cyclin-dependent kinase 2 associated protein 2 2.01234
PPP1CA protein phosphatase 1, catalytic subunit, alpha isozyme 2.00432
PRLR prolactin receptor 2.00172
FMO2 flavin containing monooxygenase 2 (non-functional) 2.00052
IL32 interleukin 32 1.98534
PRELP proline/arginine-rich end leucine-rich repeat protein 1.96699
CTH cystathionine gamma-lyase 1.95689
KCNC3 potassium channel, voltage gated Shaw related subfamily C, member 3 1.94385
SEMA6D sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D 1.94228
AUH AU RNA binding protein/enoyl-CoA hydratase 1.93615
GGT5 gamma-glutamyltransferase 5 1.92167
PPP1R3C protein phosphatase 1, regulatory subunit 3C 1.90891
RARRES2 retinoic acid receptor responder (tazarotene induced) 2 1.87387
SUV420H1 suppressor of variegation 4-20 homolog 1 (Drosophila) 1.86651
OGFRL1 opioid growth factor receptor-like 1 1.85923
FSHR follicle stimulating hormone receptor 1.84454
SLC7A10 solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10 1.84381
TMEM176A transmembrane protein 176A 1.84371
ENO1 enolase 1, (alpha) 1.84309
SPON2 spondin 2, extracellular matrix protein 1.83983
AHCYL1 adenosylhomocysteinase-like 1 1.83659
RBM4 RNA binding motif protein 4 1.82867
BRMS1 breast cancer metastasis suppressor 1 1.8141
ANOS1 anosmin 1 1.80215
COQ9 coenzyme Q9 1.80006
COX7B cytochrome c oxidase subunit VIIb 1.79866
ACSM1 acyl-CoA synthetase medium-chain family member 1 1.78442
CTNNA3 catenin (cadherin-associated protein), alpha 3 1.7803
LEFTY2 left-right determination factor 2 1.76708
CHKA choline kinase alpha 1.75878
EMC3 ER membrane protein complex subunit 3 1.75694
PDE8B phosphodiesterase 8B 1.75316
PLCXD1 phosphatidylinositol-specific phospholipase C, X domain containing 1 1.75023
MRPL48 mitochondrial ribosomal protein L48 1.73882
FMO3 flavin containing monooxygenase 3 1.73516
ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 1.72926
CAMK2A calcium/calmodulin-dependent protein kinase II alpha 1.68886
SLC4A4 solute carrier family 4 (sodium bicarbonate cotransporter), member 4 1.68811
CAPN7 calpain 7 1.68268
GBE1 glucan (1,4-alpha-), branching enzyme 1 1.67859
SIKE1 suppressor of IKBKE 1 1.67377
PLSCR4 phospholipid scramblase 4 1.65314
GSTM4 glutathione S-transferase mu 4 1.64501
CCS copper chaperone for superoxide dismutase 1.64491
AR androgen receptor 1.63691
ALAS2 5'-aminolevulinate synthase 2 1.63616
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 1.63521
RGN regucalcin 1.63245
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) 1.63041
PC pyruvate carboxylase 1.62738
TMEM2 transmembrane protein 2 1.625
VEGFC vascular endothelial growth factor C 1.61855
FPR1 formyl peptide receptor 1 1.61818
CACNA1F calcium channel, voltage-dependent, L type, alpha 1F subunit 1.61102
PPARGC1A peroxisome proliferator-activated receptor gamma, coactivator 1 alpha 1.60126
IGF1 insulin-like growth factor 1 (somatomedin C) 1.60112
NDUFS1 NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) 1.60092
FOXP3 forkhead box P3 1.5842
CPN2 carboxypeptidase N, polypeptide 2 1.57361
CRTAP cartilage associated protein 1.57077
ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9) 1.56937
ZBTB7B zinc finger and BTB domain containing 7B 1.56091
LRRTM4 leucine rich repeat transmembrane neuronal 4 1.55721
IDH3G isocitrate dehydrogenase 3 (NAD+) gamma 1.55719
POLD4 polymerase (DNA-directed), delta 4, accessory subunit 1.55594
GLB1 galactosidase, beta 1 1.55166
HLA-G major histocompatibility complex, class I, G 1.54842
DBI diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) 1.5452
FPR2 formyl peptide receptor 2 1.54358
CSF1 colony stimulating factor 1 (macrophage) 1.54323
MASP2 mannan-binding lectin serine peptidase 2 1.53785
PDZRN4 PDZ domain containing ring finger 4 1.53197
SHBG sex hormone-binding globulin 1.52684
PBK PDZ binding kinase 1.52271
DNASE1L3 deoxyribonuclease I-like 3 1.52022
CTRB2 chymotrypsinogen B2 1.51361
HDDC2 HD domain containing 2 1.50563
MEGF9 multiple EGF-like-domains 9 1.50157
NINJ1 ninjurin 1 1.49904
PTPRB protein tyrosine phosphatase, receptor type, B 1.49766
CETP cholesteryl ester transfer protein, plasma 1.49246
CCL8 chemokine (C-C motif) ligand 8 1.49189
CD207 CD207 molecule, langerin 1.48493
CENPI centromere protein I 1.47191
DMXL1 Dmx-like 1 1.46826
SLC9A3R1 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1 1.46749
TREH trehalase (brush-border membrane glycoprotein) 1.46558
SSTR2 somatostatin receptor 2 1.46357
TDO2 tryptophan 2,3-dioxygenase 1.46032
CUL1 cullin 1 1.46028
GPR88 G protein-coupled receptor 88 1.45789
HAPLN2 hyaluronan and proteoglycan link protein 2 1.45659
FGF20 fibroblast growth factor 20 1.45482
ANTXR1 anthrax toxin receptor 1 1.45319
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 1.453
SVEP1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 1.45284
KCNJ16 potassium channel, inwardly rectifying subfamily J, member 16 1.45229
LRP5 low density lipoprotein receptor-related protein 5 1.43777
ASAP3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 1.43747
ECHDC3 enoyl CoA hydratase domain containing 3 1.43374
MKRN2 makorin ring finger protein 2 1.42744
ADGRA2 adhesion G protein-coupled receptor A2 1.42558
CP ceruloplasmin (ferroxidase) 1.42296
KCTD12 potassium channel tetramerization domain containing 12 1.42253

low expression

Symbol Name Standardized Value
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase -3.53725
ZNF665 zinc finger protein 665 -3.53703
CCT8 chaperonin containing TCP1, subunit 8 (theta) -2.92398
IFNAR1 interferon (alpha, beta and omega) receptor 1 -2.80716
N6AMT1 N-6 adenine-specific DNA methyltransferase 1 (putative) -2.76663
HS1BP3 HCLS1 binding protein 3 -2.75743
TRMT1 tRNA methyltransferase 1 homolog (S. cerevisiae) -2.53946
ZNF430 zinc finger protein 430 -2.44034
MEN1 multiple endocrine neoplasia I -2.42818
NAT10 N-acetyltransferase 10 (GCN5-related) -2.37346
INTS5 integrator complex subunit 5 -2.32677
KREMEN2 kringle containing transmembrane protein 2 -2.20234
NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 -2.17496
FIBP fibroblast growth factor (acidic) intracellular binding protein -2.14252
PAQR6 progestin and adipoQ receptor family member VI -2.08484
ZNF593 zinc finger protein 593 -2.08139
SURF1 surfeit 1 -2.0591
SYMPK symplekin -2.05169
PPP6C protein phosphatase 6, catalytic subunit -2.03389
PRPF19 pre-mRNA processing factor 19 -2.01531
TSG101 tumor susceptibility 101 -2.00263
PEX16 peroxisomal biogenesis factor 16 -1.98578
ZNF43 zinc finger protein 43 -1.98133
ZNF574 zinc finger protein 574 -1.97339
SNX15 sorting nexin 15 -1.95093
AUP1 ancient ubiquitous protein 1 -1.94955
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -1.93551
USP16 ubiquitin specific peptidase 16 -1.92215
MAN2B1 mannosidase, alpha, class 2B, member 1 -1.91899
FAU Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed -1.91808
USP39 ubiquitin specific peptidase 39 -1.91156
NPFFR1 neuropeptide FF receptor 1 -1.89154
SART1 squamous cell carcinoma antigen recognized by T cells -1.89138
ECD ecdysoneless homolog (Drosophila) -1.88749
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6 -1.88706
GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic -1.88194
SURF2 surfeit 2 -1.87821
WDR74 WD repeat domain 74 -1.8761
FKBP14 FK506 binding protein 14, 22 kDa -1.86592
MED27 mediator complex subunit 27 -1.85592
CRHR2 corticotropin releasing hormone receptor 2 -1.84854
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -1.83844
ZPR1 ZPR1 zinc finger -1.82488
GCH1 GTP cyclohydrolase 1 -1.82143
KCTD15 potassium channel tetramerization domain containing 15 -1.81621
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase -1.81309
AP1G1 adaptor-related protein complex 1, gamma 1 subunit -1.79076
DOLPP1 dolichyldiphosphatase 1 -1.78589
GMDS GDP-mannose 4,6-dehydratase -1.78503
TEP1 telomerase-associated protein 1 -1.78443
CARM1 coactivator-associated arginine methyltransferase 1 -1.76846
SLC29A3 solute carrier family 29 (equilibrative nucleoside transporter), member 3 -1.75897
ZNF623 zinc finger protein 623 -1.74091
NPDC1 neural proliferation, differentiation and control, 1 -1.73281
WDR25 WD repeat domain 25 -1.70878
ARID3B AT rich interactive domain 3B (BRIGHT-like) -1.70364
HPCAL4 hippocalcin like 4 -1.69807
CYP3A4 cytochrome P450, family 3, subfamily A, polypeptide 4 -1.693
ATP6V1D ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D -1.6908
ARMC7 armadillo repeat containing 7 -1.68755
ATP6V0A2 ATPase, H+ transporting, lysosomal V0 subunit a2 -1.68065
TMEM184C transmembrane protein 184C -1.68024
ADCK4 aarF domain containing kinase 4 -1.67792
CCDC106 coiled-coil domain containing 106 -1.67199
ZNF410 zinc finger protein 410 -1.668
PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) -1.66023
TNFRSF25 tumor necrosis factor receptor superfamily, member 25 -1.6486
MRPL52 mitochondrial ribosomal protein L52 -1.6443
GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 -1.64373
CEP57 centrosomal protein 57kDa -1.63539
SRPK1 SRSF protein kinase 1 -1.63311
IL27RA interleukin 27 receptor, alpha -1.63215
GIT1 G protein-coupled receptor kinase interacting ArfGAP 1 -1.62039
HOOK2 hook microtubule-tethering protein 2 -1.62008
ADAP2 ArfGAP with dual PH domains 2 -1.61723
USP27X ubiquitin specific peptidase 27, X-linked -1.61361
AKAP8 A kinase (PRKA) anchor protein 8 -1.61166
GSTZ1 glutathione S-transferase zeta 1 -1.60879
CCDC90B coiled-coil domain containing 90B -1.60396
PBX2 pre-B-cell leukemia homeobox 2 -1.60078
RRP1B ribosomal RNA processing 1B -1.59291
DDX19A DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A -1.58937
GPR137 G protein-coupled receptor 137 -1.58656
STX5 syntaxin 5 -1.58502
DENND4A DENN/MADD domain containing 4A -1.58357
WDR43 WD repeat domain 43 -1.58214
SLC5A6 solute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6 -1.57474
PRR7 proline rich 7 (synaptic) -1.57202
WDR48 WD repeat domain 48 -1.56575
DHX34 DEAH (Asp-Glu-Ala-His) box polypeptide 34 -1.56527
PSME4 proteasome (prosome, macropain) activator subunit 4 -1.56168
DDX31 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 -1.56057
SIM2 single-minded family bHLH transcription factor 2 -1.5598
PTPN18 protein tyrosine phosphatase, non-receptor type 18 (brain-derived) -1.55968
TRAF4 TNF receptor-associated factor 4 -1.55566
GSTM5 glutathione S-transferase mu 5 -1.55048
OSGIN2 oxidative stress induced growth inhibitor family member 2 -1.54782
SRPR signal recognition particle receptor (docking protein) -1.54729
PRMT7 protein arginine methyltransferase 7 -1.54186
TBL1Y transducin (beta)-like 1, Y-linked -1.5403
NAA16 N(alpha)-acetyltransferase 16, NatA auxiliary subunit -1.53215
POLR2G polymerase (RNA) II (DNA directed) polypeptide G -1.52885
LPXN leupaxin -1.52133
DDB2 damage-specific DNA binding protein 2, 48kDa -1.51626
YKT6 YKT6 v-SNARE homolog (S. cerevisiae) -1.51039
TMEM5 transmembrane protein 5 -1.509
FAIM2 Fas apoptotic inhibitory molecule 2 -1.50355
PPAT phosphoribosyl pyrophosphate amidotransferase -1.49668
HOMER1 homer scaffolding protein 1 -1.49613
CLEC11A C-type lectin domain family 11, member A -1.49557
CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase -1.49091
LTN1 listerin E3 ubiquitin protein ligase 1 -1.49068
STMN4 stathmin-like 4 -1.47103
DDX21 DEAD (Asp-Glu-Ala-Asp) box helicase 21 -1.46896
HOXA5 homeobox A5 -1.46781
ATP13A1 ATPase type 13A1 -1.46035
GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase -1.4579
HIST1H2BF histone cluster 1, H2bf -1.45596
F12 coagulation factor XII (Hageman factor) -1.45406
B3GAT3 beta-1,3-glucuronyltransferase 3 -1.45322
UFM1 ubiquitin-fold modifier 1 -1.45288
HOXC6 homeobox C6 -1.45233
MAX MYC associated factor X -1.45112
ADAP1 ArfGAP with dual PH domains 1 -1.43701
AOC2 amine oxidase, copper containing 2 (retina-specific) -1.43511
IQCH IQ motif containing H -1.43482
EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa -1.43288
FLJ42627 uncharacterized LOC645644 -1.43265
RPS5 ribosomal protein S5 -1.43103
CAMSAP1 calmodulin regulated spectrin-associated protein 1 -1.43069
EP300 E1A binding protein p300 -1.42852
VASP vasodilator-stimulated phosphoprotein -1.42836
PATZ1 POZ (BTB) and AT hook containing zinc finger 1 -1.42699
CYTH4 cytohesin 4 -1.42498
ANK2 ankyrin 2, neuronal -1.42366
LMTK1 lemur tail kinase 1 -1.42146
KAT6B K(lysine) acetyltransferase 6B -1.42025
KMT2A lysine (K)-specific methyltransferase 2A -1.41635