SNU-387 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Hepatocellular Carcinoma Tumour (Cell Model Passports, SIDM01180)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM01180
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Genes

197 proteins associated with the cell line SNU-387 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ACBD3 acyl-CoA binding domain containing 3
ADD3 adducin 3 (gamma)
AIP aryl hydrocarbon receptor interacting protein
ARF4 ADP-ribosylation factor 4
ARFGEF3 ARFGEF family member 3
ATP2B3 ATPase, Ca++ transporting, plasma membrane 3
B2M beta-2-microglobulin
B4GAT1 beta-1,4-glucuronyltransferase 1
CADM3 cell adhesion molecule 3
CASP8 caspase 8, apoptosis-related cysteine peptidase
CD58 CD58 molecule
CD81 CD81 molecule
CD99 CD99 molecule
CMTM6 CKLF-like MARVEL transmembrane domain containing 6
COL6A3 collagen, type VI, alpha 3
COX16 COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
CPT1A carnitine palmitoyltransferase 1A (liver)
CRELD1 cysteine-rich with EGF-like domains 1
CRTAP cartilage associated protein
DNM1P26 dynamin 1 pseudogene 26
DOCK2 dedicator of cytokinesis 2
ECE1 endothelin converting enzyme 1
EFEMP1 EGF containing fibulin-like extracellular matrix protein 1
EPHX1 epoxide hydrolase 1, microsomal (xenobiotic)
ERP44 endoplasmic reticulum protein 44
FAM117B family with sequence similarity 117, member B
FAT1 FAT atypical cadherin 1
GLIPR2 GLI pathogenesis-related 2
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
GNAQ guanine nucleotide binding protein (G protein), q polypeptide
GOLT1B golgi transport 1B
H6PD hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
HIST1H2APS2 histone cluster 1, H2a, pseudogene 2
HLA-A major histocompatibility complex, class I, A
HLA-C major histocompatibility complex, class I, C
IFITM3 interferon induced transmembrane protein 3
IGF2R insulin-like growth factor 2 receptor
KDM1B lysine (K)-specific demethylase 1B
KDM2A lysine (K)-specific demethylase 2A
LAMP2 lysosomal-associated membrane protein 2
LENG1 leukocyte receptor cluster (LRC) member 1
LIMS1 LIM and senescent cell antigen-like domains 1
LMF2 lipase maturation factor 2
LRRC59 leucine rich repeat containing 59
LSS lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)
MAGT1 magnesium transporter 1
MARCKS myristoylated alanine-rich protein kinase C substrate
MPZL1 myelin protein zero-like 1
MTFMT mitochondrial methionyl-tRNA formyltransferase
MYH7 myosin, heavy chain 7, cardiac muscle, beta
MYL2 myosin, light chain 2, regulatory, cardiac, slow
MYL6B myosin, light chain 6B, alkali, smooth muscle and non-muscle
NDUFAF1 NADH dehydrogenase (ubiquinone) complex I, assembly factor 1
NFIC nuclear factor I/C (CCAAT-binding transcription factor)
NIPSNAP3A nipsnap homolog 3A (C. elegans)
NOTCH2 notch 2
NPC2 Niemann-Pick disease, type C2
NPTN neuroplastin
NRAS neuroblastoma RAS viral (v-ras) oncogene homolog
P3H1 prolyl 3-hydroxylase 1
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II
P4HB prolyl 4-hydroxylase, beta polypeptide
PC pyruvate carboxylase
PDIA6 protein disulfide isomerase family A, member 6
PLBD2 phospholipase B domain containing 2
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2
PPP6R1 protein phosphatase 6, regulatory subunit 1
PRNP prion protein
RAB15 RAB15, member RAS oncogene family
RAB1B RAB1B, member RAS oncogene family
RAB23 RAB23, member RAS oncogene family
RAB32 RAB32, member RAS oncogene family
RAB35 RAB35, member RAS oncogene family
RAB6A RAB6A, member RAS oncogene family
RABGAP1 RAB GTPase activating protein 1
RALYL RALY RNA binding protein-like
RSU1 Ras suppressor protein 1
SLIT1 slit homolog 1 (Drosophila)
STAMBPL1 STAM binding protein-like 1
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic)
SUN2 Sad1 and UNC84 domain containing 2
SUN5 Sad1 and UNC84 domain containing 5
SYPL1 synaptophysin-like 1
TEX10 testis expressed 10
TGFBI transforming growth factor, beta-induced, 68kDa
TMEM43 transmembrane protein 43
TMSB4Y thymosin beta 4, Y-linked
TMX4 thioredoxin-related transmembrane protein 4
TPM1 tropomyosin 1 (alpha)
TXNDC15 thioredoxin domain containing 15
TXNDC5 thioredoxin domain containing 5 (endoplasmic reticulum)
TXNIP thioredoxin interacting protein
UBAP1 ubiquitin associated protein 1
UGGT1 UDP-glucose glycoprotein glucosyltransferase 1
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
VASN vasorin
ZKSCAN2 zinc finger with KRAB and SCAN domains 2

Symbol Name
ABT1 activator of basal transcription 1
ADK adenosine kinase
AGO2 argonaute RISC catalytic component 2
BMS1 BMS1 ribosome biogenesis factor
BPGM 2,3-bisphosphoglycerate mutase
C12ORF43 chromosome 12 open reading frame 43
C19ORF53 chromosome 19 open reading frame 53
C5ORF24 chromosome 5 open reading frame 24
CBLL1 Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase
COL11A1 collagen, type XI, alpha 1
COL19A1 collagen, type XIX, alpha 1
COPG2 coatomer protein complex, subunit gamma 2
CRB2 crumbs family member 2
DCAF7 DDB1 and CUL4 associated factor 7
DCUN1D5 DCN1, defective in cullin neddylation 1, domain containing 5
DDX28 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
DDX52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
DHRS7B dehydrogenase/reductase (SDR family) member 7B
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6
ECT2 epithelial cell transforming 2
EED embryonic ectoderm development
EP400 E1A binding protein p400
EPN2 epsin 2
FAM210B family with sequence similarity 210, member B
FBXO3 F-box protein 3
FCF1 FCF1 rRNA-processing protein
FNBP4 formin binding protein 4
GIPC2 GIPC PDZ domain containing family, member 2
GPATCH11 G patch domain containing 11
GPR45 G protein-coupled receptor 45
GTF2A2 general transcription factor IIA, 2, 12kDa
HGH1 HGH1 homolog (S. cerevisiae)
HIF1AN hypoxia inducible factor 1, alpha subunit inhibitor
HMBS hydroxymethylbilane synthase
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
INCENP inner centromere protein antigens 135/155kDa
JUN jun proto-oncogene
KATNB1 katanin p80 (WD repeat containing) subunit B 1
KIAA1143 KIAA1143
KIF13B kinesin family member 13B
KIF14 kinesin family member 14
LAMA5 laminin, alpha 5
LOC101926989 uncharacterized LOC101926989
LZTFL1 leucine zipper transcription factor-like 1
MED30 mediator complex subunit 30
MICB MHC class I polypeptide-related sequence B
MIR513A1 microRNA 513a-1
MOCS3 molybdenum cofactor synthesis 3
NADSYN1 NAD synthetase 1
NDUFAF7 NADH dehydrogenase (ubiquinone) complex I, assembly factor 7
NLRP1 NLR family, pyrin domain containing 1
NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1
NUDCD1 NudC domain containing 1
NUDT3 nudix (nucleoside diphosphate linked moiety X)-type motif 3
NUFIP1 nuclear fragile X mental retardation protein interacting protein 1
NVL nuclear VCP-like
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa
OSGEP O-sialoglycoprotein endopeptidase
PCF11 PCF11 cleavage and polyadenylation factor subunit
PDCL phosducin-like
PDCL3 phosducin-like 3
PHRF1 PHD and ring finger domains 1
PIP4K2C phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
POLB polymerase (DNA directed), beta
POLR1A polymerase (RNA) I polypeptide A, 194kDa
POLR1E polymerase (RNA) I polypeptide E, 53kDa
PPP1CC protein phosphatase 1, catalytic subunit, gamma isozyme
PPP4R2 protein phosphatase 4, regulatory subunit 2
PREPL prolyl endopeptidase-like
PRKCD protein kinase C, delta
PRMT3 protein arginine methyltransferase 3
PRMT5 protein arginine methyltransferase 5
PSPH phosphoserine phosphatase
PUM3 pumilio RNA binding family member 3
PUS1 pseudouridylate synthase 1
RAVER1 ribonucleoprotein, PTB-binding 1
RNF126 ring finger protein 126
RPL38 ribosomal protein L38
RRAGA Ras-related GTP binding A
SAMD1 sterile alpha motif domain containing 1
SAP30 Sin3A-associated protein, 30kDa
SDAD1 SDA1 domain containing 1
SEC16A SEC16 homolog A (S. cerevisiae)
SIAE sialic acid acetylesterase
SMYD3 SET and MYND domain containing 3
SPESP1 sperm equatorial segment protein 1
TMEM98 transmembrane protein 98
TRAPPC12 trafficking protein particle complex 12
TRIM27 tripartite motif containing 27
TSLIG3B tRNA splicing ligase complex subunit 3B
TTC9C tetratricopeptide repeat domain 9C
UBA7 ubiquitin-like modifier activating enzyme 7
USF2 upstream transcription factor 2, c-fos interacting
USP36 ubiquitin specific peptidase 36
VAMP8 vesicle-associated membrane protein 8
ZNF280C zinc finger protein 280C
ZNF292 zinc finger protein 292
ZNF512B zinc finger protein 512B