SNU-398 Gene Set
Genes
22 genes with high or low copy number in SNU-398 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
high copy number
| Symbol |
Name |
Standardized Value |
|
MYCNOS
|
MYCN opposite strand
|
2.18124
|
|
MYCN
|
v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog
|
2.18124
|
|
OR4K5
|
olfactory receptor, family 4, subfamily K, member 5
|
2.06626
|
|
OR4K2
|
olfactory receptor, family 4, subfamily K, member 2
|
2.06626
|
|
OR4K1
|
olfactory receptor, family 4, subfamily K, member 1
|
2.06626
|
|
OR4N2
|
olfactory receptor, family 4, subfamily N, member 2
|
2.06626
|
|
SNORA40
|
small nucleolar RNA, H/ACA box 40
|
2.05129
|
|
IGHG1
|
immunoglobulin heavy constant gamma 1 (G1m marker)
|
2.04842
|
|
IGHE
|
immunoglobulin heavy constant epsilon
|
2.04816
|
|
IGHD
|
immunoglobulin heavy constant delta
|
2.04803
|
|
ADAM6
|
ADAM metallopeptidase domain 6 (pseudogene)
|
2.04767
|
|
KIAA0125
|
KIAA0125
|
2.04731
|
|
LINC00226
|
long intergenic non-protein coding RNA 226
|
2.04712
|
low copy number
| Symbol |
Name |
Standardized Value |
|
EVI2A
|
ecotropic viral integration site 2A
|
-3.56449
|
|
EVI2B
|
ecotropic viral integration site 2B
|
-3.56449
|
|
OMG
|
oligodendrocyte myelin glycoprotein
|
-3.56449
|
|
GRID2
|
glutamate receptor, ionotropic, delta 2
|
-3.53061
|
|
NF1
|
neurofibromin 1
|
-3.48051
|
|
NAALADL2-AS3
|
NAALADL2 antisense RNA 3
|
-3.04917
|
|
UGT2B28
|
UDP glucuronosyltransferase 2 family, polypeptide B28
|
-3.04299
|
|
SMARCA4
|
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
|
-3.03082
|
|
NAALADL2
|
N-acetylated alpha-linked acidic dipeptidase-like 2
|
-3.00065
|
