SNU-407 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Colorectal Carcinoma Metastasis (Cell Model Passports, SIDM00214)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00214
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Genes

198 proteins associated with the cell line SNU-407 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ABHD11 abhydrolase domain containing 11
ACAA2 acetyl-CoA acyltransferase 2
ACBD3 acyl-CoA binding domain containing 3
ADAR adenosine deaminase, RNA-specific
ADK adenosine kinase
AHCYL1 adenosylhomocysteinase-like 1
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial)
ANXA11 annexin A11
ANXA3 annexin A3
ASS1 argininosuccinate synthase 1
BCKDHA branched chain keto acid dehydrogenase E1, alpha polypeptide
C1ORF116 chromosome 1 open reading frame 116
CCAR1 cell division cycle and apoptosis regulator 1
CCDC22 coiled-coil domain containing 22
CDK13 cyclin-dependent kinase 13
CMAS cytidine monophosphate N-acetylneuraminic acid synthetase
COA6 cytochrome c oxidase assembly factor 6
COBLL1 cordon-bleu WH2 repeat protein-like 1
COX20 COX20 cytochrome c oxidase assembly factor
DDAH1 dimethylarginine dimethylaminohydrolase 1
DNAH8 dynein, axonemal, heavy chain 8
DSC2 desmocollin 2
EBAG9 estrogen receptor binding site associated, antigen, 9
EPB41L3 erythrocyte membrane protein band 4.1-like 3
ERCC4 excision repair cross-complementation group 4
ETHE1 ethylmalonic encephalopathy 1
FAM193B family with sequence similarity 193, member B
FAM3D family with sequence similarity 3, member D
FH fumarate hydratase
FLAD1 flavin adenine dinucleotide synthetase 1
FLVCR1 feline leukemia virus subgroup C cellular receptor 1
GADD45GIP1 growth arrest and DNA-damage-inducible, gamma interacting protein 1
HADH hydroxyacyl-CoA dehydrogenase
HDGF hepatoma-derived growth factor
HDHD3 haloacid dehalogenase-like hydrolase domain containing 3
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1
HGH1 HGH1 homolog (S. cerevisiae)
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble
INTS7 integrator complex subunit 7
ISG15 ISG15 ubiquitin-like modifier
KLF5 Kruppel-like factor 5 (intestinal)
LETM1 leucine zipper-EF-hand containing transmembrane protein 1
LGALS3 lectin, galactoside-binding, soluble, 3
LOC102724978 atherin-like
LOC105374084 uncharacterized LOC105374084
MCEE methylmalonyl CoA epimerase
MIA3 melanoma inhibitory activity family, member 3
MLEC malectin
MORF4L1 mortality factor 4 like 1
MPZL1 myelin protein zero-like 1
MREG melanoregulin
MRPL1 mitochondrial ribosomal protein L1
MRPL30 mitochondrial ribosomal protein L30
MRPL33 mitochondrial ribosomal protein L33
MRPL40 mitochondrial ribosomal protein L40
MRPL50 mitochondrial ribosomal protein L50
MRPL55 mitochondrial ribosomal protein L55
MRRF mitochondrial ribosome recycling factor
MTTP microsomal triglyceride transfer protein
MUC1 mucin 1, cell surface associated
NADK2 NAD kinase 2, mitochondrial
NTPCR nucleoside-triphosphatase, cancer-related
OR52N2 olfactory receptor, family 52, subfamily N, member 2
PDSS2 prenyl (decaprenyl) diphosphate synthase, subunit 2
PEX6 peroxisomal biogenesis factor 6
PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
PLBD1 phospholipase B domain containing 1
POF1B premature ovarian failure, 1B
POLG polymerase (DNA directed), gamma
PPA2 pyrophosphatase (inorganic) 2
PTBP3 polypyrimidine tract binding protein 3
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2
PYCR2 pyrroline-5-carboxylate reductase family, member 2
RAD18 RAD18 E3 ubiquitin protein ligase
RBM34 RNA binding motif protein 34
RNPEP arginyl aminopeptidase (aminopeptidase B)
RNY3P9 RNA, Ro-associated Y3 pseudogene 9
RPL22L1 ribosomal protein L22-like 1
S100P S100 calcium binding protein P
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5
SF3B2 splicing factor 3b, subunit 2, 145kDa
SFN stratifin
SFT2D2 SFT2 domain containing 2
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2
SRI sorcin
SYNE1 spectrin repeat containing, nuclear envelope 1
TAF5 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa
TARS2 threonyl-tRNA synthetase 2, mitochondrial (putative)
TIMM44 translocase of inner mitochondrial membrane 44 homolog (yeast)
TMEM179B transmembrane protein 179B
TMEM63A transmembrane protein 63A
TOR1AIP1 torsin A interacting protein 1
TRIP4 thyroid hormone receptor interactor 4
TSPAN3 tetraspanin 3
TTC19 tetratricopeptide repeat domain 19
UBQLN4 ubiquilin 4
VAC14 Vac14 homolog (S. cerevisiae)
WWP2 WW domain containing E3 ubiquitin protein ligase 2
YRDC yrdC N(6)-threonylcarbamoyltransferase domain containing

Symbol Name
ABCD3 ATP-binding cassette, sub-family D (ALD), member 3
ABHD14A abhydrolase domain containing 14A
ARPC1B actin related protein 2/3 complex, subunit 1B, 41kDa
ASB9 ankyrin repeat and SOCS box containing 9
ATN1 atrophin 1
ATP5IF1 ATP synthase inhibitory factor subunit 1
ATP6AP2 ATPase, H+ transporting, lysosomal accessory protein 2
BLOC1S4 biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino
C17ORF75 chromosome 17 open reading frame 75
C5ORF15 chromosome 5 open reading frame 15
CASP2 caspase 2, apoptosis-related cysteine peptidase
CDKN2A cyclin-dependent kinase inhibitor 2A
CKAP2 cytoskeleton associated protein 2
COG1 component of oligomeric golgi complex 1
CTSZ cathepsin Z
CTU2 cytosolic thiouridylase subunit 2 homolog (S. pombe)
CUL1 cullin 1
CWC22 CWC22 spliceosome-associated protein
CWF19L1 CWF19-like 1, cell cycle control (S. pombe)
DBN1 drebrin 1
DHRS3 dehydrogenase/reductase (SDR family) member 3
DHX34 DEAH (Asp-Glu-Ala-His) box polypeptide 34
DNAJA2 DnaJ (Hsp40) homolog, subfamily A, member 2
EIF2B3 eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa
GBF1 golgi brefeldin A resistant guanine nucleotide exchange factor 1
GLE1 GLE1 RNA export mediator
GNAT2 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2
GPX8 glutathione peroxidase 8 (putative)
GRIPAP1 GRIP1 associated protein 1
GTF3C1 general transcription factor IIIC, polypeptide 1, alpha 220kDa
GTF3C4 general transcription factor IIIC, polypeptide 4, 90kDa
HACL1 2-hydroxyacyl-CoA lyase 1
HELLS helicase, lymphoid-specific
HIRA histone cell cycle regulator
HK1 hexokinase 1
INTS3 integrator complex subunit 3
IRF6 interferon regulatory factor 6
KMT2B lysine (K)-specific methyltransferase 2B
LDHAL6B lactate dehydrogenase A-like 6B
MANBAL mannosidase, beta A, lysosomal-like
MARCKS myristoylated alanine-rich protein kinase C substrate
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase
MYEF2 myelin expression factor 2
NGLY1 N-glycanase 1
NR4A2 nuclear receptor subfamily 4, group A, member 2
NUP37 nucleoporin 37kDa
PBRM1 polybromo 1
PCBP3 poly(rC) binding protein 3
PDK3 pyruvate dehydrogenase kinase, isozyme 3
PKP1 plakophilin 1
PPIP5K2 diphosphoinositol pentakisphosphate kinase 2
PPP6C protein phosphatase 6, catalytic subunit
PRC1 protein regulator of cytokinesis 1
PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit
PRKDC protein kinase, DNA-activated, catalytic polypeptide
PSME4 proteasome (prosome, macropain) activator subunit 4
PSMG1 proteasome (prosome, macropain) assembly chaperone 1
PTK2B protein tyrosine kinase 2 beta
QKI QKI, KH domain containing, RNA binding
RAB14 RAB14, member RAS oncogene family
RAB35 RAB35, member RAS oncogene family
RANBP6 RAN binding protein 6
RFC3 replication factor C (activator 1) 3, 38kDa
RHOC ras homolog family member C
RNF11 ring finger protein 11
RNF14 ring finger protein 14
RPL15P19 ribosomal protein L15 pseudogene
RPL18 ribosomal protein L18
RPL4 ribosomal protein L4
SEC31A SEC31 homolog A (S. cerevisiae)
SELENOF selenoprotein F
SHMT2 serine hydroxymethyltransferase 2 (mitochondrial)
SI sucrase-isomaltase (alpha-glucosidase)
SIGMAR1 sigma non-opioid intracellular receptor 1
SIRPA signal-regulatory protein alpha
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5
SMPD4 sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)
SNX8 sorting nexin 8
SORCS2 sortilin-related VPS10 domain containing receptor 2
SORT1 sortilin 1
SPRR1A small proline-rich protein 1A
STK38 serine/threonine kinase 38
SUGP2 SURP and G patch domain containing 2
SUOX sulfite oxidase
TANK TRAF family member-associated NFKB activator
TIMM17B translocase of inner mitochondrial membrane 17 homolog B (yeast)
TMEM33 transmembrane protein 33
TOP2A topoisomerase (DNA) II alpha 170kDa
TRAFD1 TRAF-type zinc finger domain containing 1
TRMT2B tRNA methyltransferase 2 homolog B (S. cerevisiae)
TXNDC9 thioredoxin domain containing 9
UBE3C ubiquitin protein ligase E3C
UTP15 UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)
VPS11 vacuolar protein sorting 11 homolog (S. cerevisiae)
YBEY ybeY metallopeptidase (putative)
YEATS4 YEATS domain containing 4
ZCCHC9 zinc finger, CCHC domain containing 9
ZFYVE16 zinc finger, FYVE domain containing 16