SNU-423 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Hepatocellular Carcinoma Tumour (Cell Model Passports, SIDM01199)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM01199
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Genes

198 proteins associated with the cell line SNU-423 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ABHD12 abhydrolase domain containing 12
ACADSB acyl-CoA dehydrogenase, short/branched chain
ACOT9 acyl-CoA thioesterase 9
ACSL4 acyl-CoA synthetase long-chain family member 4
ALDH18A1 aldehyde dehydrogenase 18 family, member A1
APMAP adipocyte plasma membrane associated protein
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
ARMCX3 armadillo repeat containing, X-linked 3
ATAD1 ATPase family, AAA domain containing 1
ATP6AP1 ATPase, H+ transporting, lysosomal accessory protein 1
ATP6AP2 ATPase, H+ transporting, lysosomal accessory protein 2
B3GAT3 beta-1,3-glucuronyltransferase 3
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3
CAPN7 calpain 7
CLTC clathrin, heavy chain (Hc)
COL14A1 collagen, type XIV, alpha 1
COX14 COX14 cytochrome c oxidase assembly factor
COX20 COX20 cytochrome c oxidase assembly factor
CPA4 carboxypeptidase A4
CS citrate synthase
CTNNBL1 catenin, beta like 1
CUL4B cullin 4B
DAP3 death associated protein 3
DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
EFTUD2 elongation factor Tu GTP binding domain containing 2
EMC6 ER membrane protein complex subunit 6
FOLH1 folate hydrolase (prostate-specific membrane antigen) 1
FUCA1 fucosidase, alpha-L- 1, tissue
GANAB glucosidase, alpha; neutral AB
GET4 golgi to ER traffic protein 4 homolog (S. cerevisiae)
GHITM growth hormone inducible transmembrane protein
GNA11 guanine nucleotide binding protein (G protein), alpha 11 (Gq class)
GVINP1 GTPase, very large interferon inducible pseudogene 1
HCCS holocytochrome c synthase
HEXB hexosaminidase B (beta polypeptide)
INTS5 integrator complex subunit 5
KISS1 KiSS-1 metastasis-suppressor
KRT1 keratin 1, type II
KRT10 keratin 10, type I
KRT77 keratin 77, type II
KRT9 keratin 9, type I
LACTB lactamase, beta
LAMP2 lysosomal-associated membrane protein 2
LAS1L LAS1-like (S. cerevisiae)
LIPA lipase A, lysosomal acid, cholesterol esterase
LMAN2L lectin, mannose-binding 2-like
LOC105373020 uncharacterized LOC105373020
MMP27 matrix metallopeptidase 27
MRPS27 mitochondrial ribosomal protein S27
MTCH2 mitochondrial carrier 2
MYH14 myosin, heavy chain 14, non-muscle
NDUFAF4 NADH dehydrogenase (ubiquinone) complex I, assembly factor 4
NOC2L nucleolar complex associated 2 homolog (S. cerevisiae)
NONO non-POU domain containing, octamer-binding
NUP107 nucleoporin 107kDa
NUP85 nucleoporin 85kDa
NUP88 nucleoporin 88kDa
NYX nyctalopin
OAT ornithine aminotransferase
OSBPL8 oxysterol binding protein-like 8
PDK1 pyruvate dehydrogenase kinase, isozyme 1
PI4K2A phosphatidylinositol 4-kinase type 2 alpha
POLDIP2 polymerase (DNA-directed), delta interacting protein 2
PPP1CC protein phosphatase 1, catalytic subunit, gamma isozyme
PRDX3 peroxiredoxin 3
PRDX4 peroxiredoxin 4
PRPF6 pre-mRNA processing factor 6
PRPF8 pre-mRNA processing factor 8
PSMD12 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12
PTBP1 polypyrimidine tract binding protein 1
PTCD3 pentatricopeptide repeat domain 3
PTPN1 protein tyrosine phosphatase, non-receptor type 1
PWP1 PWP1 homolog (S. cerevisiae)
RAB15 RAB15, member RAS oncogene family
RAB5C RAB5C, member RAS oncogene family
RAB8A RAB8A, member RAS oncogene family
RALY RALY heterogeneous nuclear ribonucleoprotein
RALYL RALY RNA binding protein-like
RPL15 ribosomal protein L15
SAMM50 SAMM50 sorting and assembly machinery component
SEC22B SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)
SEC61G Sec61 gamma subunit
SF3B3 splicing factor 3b, subunit 3, 130kDa
SLC16A2 solute carrier family 16, member 2 (thyroid hormone transporter)
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5
SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6
SMU1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5)
SNRNP40 small nuclear ribonucleoprotein 40kDa (U5)
SYT6 synaptotagmin VI
TFB2M transcription factor B2, mitochondrial
THOC2 THO complex 2
TIMM17B translocase of inner mitochondrial membrane 17 homolog B (yeast)
TIMM23 translocase of inner mitochondrial membrane 23 homolog (yeast)
TIMM8A translocase of inner mitochondrial membrane 8 homolog A (yeast)
TM9SF3 transmembrane 9 superfamily member 3
TRIP12 thyroid hormone receptor interactor 12
VMA21 VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
WFS1 Wolfram syndrome 1 (wolframin)

Symbol Name
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3
AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
AMDHD2 amidohydrolase domain containing 2
ARFIP1 ADP-ribosylation factor interacting protein 1
ARHGAP26 Rho GTPase activating protein 26
ASB2 ankyrin repeat and SOCS box containing 2
ASF1A anti-silencing function 1A histone chaperone
ASH2L ash2 (absent, small, or homeotic)-like (Drosophila)
BAIAP2L1 BAI1-associated protein 2-like 1
BLOC1S3 biogenesis of lysosomal organelles complex-1, subunit 3
BRCA2 breast cancer 2, early onset
C1ORF122 chromosome 1 open reading frame 122
CASP3 caspase 3, apoptosis-related cysteine peptidase
CDK16 cyclin-dependent kinase 16
CHCHD6 coiled-coil-helix-coiled-coil-helix domain containing 6
CHMP1B charged multivesicular body protein 1B
CNOT7 CCR4-NOT transcription complex, subunit 7
CRLF3 cytokine receptor-like factor 3
CSTF2T cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
D2HGDH D-2-hydroxyglutarate dehydrogenase
DNAJB14 DnaJ (Hsp40) homolog, subfamily B, member 14
DNAJC21 DnaJ (Hsp40) homolog, subfamily C, member 21
DPF2 D4, zinc and double PHD fingers family 2
DPY30 dpy-30 homolog (C. elegans)
DUS3L dihydrouridine synthase 3-like (S. cerevisiae)
DYNLL1P7 dynein, light chain, LC8-type 1 pseudogene 7
DYNLT1 dynein, light chain, Tctex-type 1
ELP3 elongator acetyltransferase complex subunit 3
EPPK1 epiplakin 1
FBXO30 F-box protein 30
FCRLA Fc receptor-like A
FNBP4 formin binding protein 4
G3BP2 GTPase activating protein (SH3 domain) binding protein 2
GNB1L guanine nucleotide binding protein (G protein), beta polypeptide 1-like
GRIPAP1 GRIP1 associated protein 1
GSK3B glycogen synthase kinase 3 beta
GSTP1 glutathione S-transferase pi 1
GTF2H5 general transcription factor IIH, polypeptide 5
HBD hemoglobin, delta
HMGN4 high mobility group nucleosomal binding domain 4
HS1BP3 HCLS1 binding protein 3
HYI hydroxypyruvate isomerase (putative)
HYPK huntingtin interacting protein K
ITGB6 integrin, beta 6
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3
LAMTOR5 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5
LDHB lactate dehydrogenase B
LIMD1 LIM domains containing 1
MAFA v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog A
MCRIP2 MAPK regulated corepressor interacting protein 2
MEMO1 mediator of cell motility 1
METAP1 methionyl aminopeptidase 1
METAP2 methionyl aminopeptidase 2
MIR513A1 microRNA 513a-1
MPI mannose phosphate isomerase
MRPL30 mitochondrial ribosomal protein L30
MRPL33 mitochondrial ribosomal protein L33
MT-ATP8 ATP synthase F0 subunit 8
MYO7A myosin VIIA
NDUFS6 NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)
NQO2 NAD(P)H dehydrogenase, quinone 2
PCYT1B phosphate cytidylyltransferase 1, choline, beta
PDCD2L programmed cell death 2-like
PDCD4 programmed cell death 4 (neoplastic transformation inhibitor)
PHRF1 PHD and ring finger domains 1
PPP4R2 protein phosphatase 4, regulatory subunit 2
PRCC papillary renal cell carcinoma (translocation-associated)
PSPC1 paraspeckle component 1
RAB29 RAB29, member RAS oncogene family
RABEP2 rabaptin, RAB GTPase binding effector protein 2
RAD23A RAD23 homolog A (S. cerevisiae)
RBM33 RNA binding motif protein 33
RPS15 ribosomal protein S15
SARNP SAP domain containing ribonucleoprotein
SCAF1 SR-related CTD-associated factor 1
SCEL sciellin
SKIV2L superkiller viralicidic activity 2-like (S. cerevisiae)
SLBP stem-loop binding protein
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3
SMAD4 SMAD family member 4
SNRPA small nuclear ribonucleoprotein polypeptide A
SORD sorbitol dehydrogenase
SRRM2 serine/arginine repetitive matrix 2
STARD3 StAR-related lipid transfer (START) domain containing 3
SUFU suppressor of fused homolog (Drosophila)
TACC3 transforming, acidic coiled-coil containing protein 3
TBC1D9B TBC1 domain family, member 9B (with GRAM domain)
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1
TDP2 tyrosyl-DNA phosphodiesterase 2
THAP11 THAP domain containing 11
THEM6 thioesterase superfamily member 6
TKFC triokinase/FMN cyclase
TRAPPC3 trafficking protein particle complex 3
TUBGCP3 tubulin, gamma complex associated protein 3
UBAP2 ubiquitin associated protein 2
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae)
WDR47 WD repeat domain 47
ZNF671 zinc finger protein 671