SNU-449 Gene Set
Genes
46 genes with high or low copy number in SNU-449 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
high copy number
| Symbol |
Name |
Standardized Value |
|
EPN2-AS1
|
EPN2 antisense RNA 1
|
2.09161
|
|
EPN2-IT1
|
EPN2 intronic transcript 1
|
2.09117
|
|
EPN2
|
epsin 2
|
2.08806
|
|
MFAP4
|
microfibrillar-associated protein 4
|
2.08781
|
|
B9D1
|
B9 protein domain 1
|
2.08781
|
|
MIR1180
|
microRNA 1180
|
2.08781
|
|
MAPK7
|
mitogen-activated protein kinase 7
|
2.08781
|
|
RNF112
|
ring finger protein 112
|
2.08781
|
|
SNORA59A
|
small nucleolar RNA, H/ACA box 59A
|
2.08712
|
|
SLC47A1
|
solute carrier family 47 (multidrug and toxin extrusion), member 1
|
2.08712
|
|
IGHG1
|
immunoglobulin heavy constant gamma 1 (G1m marker)
|
2.04842
|
|
IGHE
|
immunoglobulin heavy constant epsilon
|
2.04816
|
|
IGHD
|
immunoglobulin heavy constant delta
|
2.04803
|
|
ADAM6
|
ADAM metallopeptidase domain 6 (pseudogene)
|
2.04767
|
|
KIAA0125
|
KIAA0125
|
2.04731
|
|
LINC00226
|
long intergenic non-protein coding RNA 226
|
2.04712
|
low copy number
| Symbol |
Name |
Standardized Value |
|
MIR4473
|
microRNA 4473
|
-2.82708
|
|
MLLT3
|
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
|
-2.81841
|
|
MIR4474
|
microRNA 4474
|
-2.81559
|
|
MIR491
|
microRNA 491
|
-2.80395
|
|
SNORA30
|
small nucleolar RNA, H/ACA box 30
|
-2.79995
|
|
TUSC1
|
tumor suppressor candidate 1
|
-2.78941
|
|
FOCAD
|
focadhesin
|
-2.7828
|
|
HACD4
|
3-hydroxyacyl-CoA dehydratase 4
|
-2.78237
|
|
IFNB1
|
interferon, beta 1, fibroblast
|
-2.77588
|
|
IFNW1
|
interferon, omega 1
|
-2.77446
|
|
IZUMO3
|
IZUMO family member 3
|
-2.77409
|
|
IFNA21
|
interferon, alpha 21
|
-2.77074
|
|
IFNA4
|
interferon, alpha 4
|
-2.7694
|
|
IFNA17
|
interferon, alpha 17
|
-2.76453
|
|
IFNA16
|
interferon, alpha 16
|
-2.76453
|
|
IFNA10
|
interferon, alpha 10
|
-2.75972
|
|
IFNA7
|
interferon, alpha 7
|
-2.75972
|
|
IFNA14
|
interferon, alpha 14
|
-2.75972
|
|
IFNA22P
|
interferon, alpha 22, pseudogene
|
-2.75555
|
|
PSG4
|
pregnancy specific beta-1-glycoprotein 4
|
-2.75301
|
|
IFNA5
|
interferon, alpha 5
|
-2.74973
|
|
KLHL9
|
kelch-like family member 9
|
-2.74526
|
|
ELAVL2
|
ELAV like neuron-specific RNA binding protein 2
|
-2.74526
|
|
LOC284344
|
uncharacterized LOC284344
|
-2.74526
|
|
IFNA6
|
interferon, alpha 6
|
-2.74032
|
|
IFNA13
|
interferon, alpha 13
|
-2.73798
|
|
IFNA2
|
interferon, alpha 2
|
-2.73608
|
|
IFNA8
|
interferon, alpha 8
|
-2.73024
|
|
IFNA1
|
interferon, alpha 1
|
-2.72828
|
|
IFNE
|
interferon, epsilon
|
-2.72466
|
