SNU-449 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Hepatocellular Carcinoma Tumour (Cell Model Passports, SIDM01194)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM01194
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Genes

194 proteins associated with the cell line SNU-449 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4
ACBD5 acyl-CoA binding domain containing 5
ACOT9 acyl-CoA thioesterase 9
AGK acylglycerol kinase
AIFM1 apoptosis-inducing factor, mitochondrion-associated, 1
ARF6 ADP-ribosylation factor 6
ARMC10 armadillo repeat containing 10
ARNT aryl hydrocarbon receptor nuclear translocator
C18ORF25 chromosome 18 open reading frame 25
C1ORF35 chromosome 1 open reading frame 35
CCDC171 coiled-coil domain containing 171
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase
COX19 COX19 cytochrome c oxidase assembly factor
COX20 COX20 cytochrome c oxidase assembly factor
CYB5B cytochrome b5 type B (outer mitochondrial membrane)
CYC1 cytochrome c-1
DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
DDX50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
DHTKD1 dehydrogenase E1 and transketolase domain containing 1
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9
DPM3 dolichyl-phosphate mannosyltransferase polypeptide 3
ECI2 enoyl-CoA delta isomerase 2
EPN2 epsin 2
EPN3 epsin 3
ESYT2 extended synaptotagmin-like protein 2
FMNL2 formin-like 2
FTSJ3 FtsJ homolog 3 (E. coli)
GNA13 guanine nucleotide binding protein (G protein), alpha 13
GNL2 guanine nucleotide binding protein-like 2 (nucleolar)
GRAMD1C GRAM domain containing 1C
GTPBP4 GTP binding protein 4
HCCS holocytochrome c synthase
HIST1H2APS2 histone cluster 1, H2a, pseudogene 2
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial
L1CAM L1 cell adhesion molecule
LOC101928860 uncharacterized LOC101928860
LONP1 lon peptidase 1, mitochondrial
LRRC59 leucine rich repeat containing 59
MAVS mitochondrial antiviral signaling protein
MCU mitochondrial calcium uniporter
MKKS McKusick-Kaufman syndrome
MMP27 matrix metallopeptidase 27
MRM1 mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)
MRPL10 mitochondrial ribosomal protein L10
MRPL12 mitochondrial ribosomal protein L12
MRPS15 mitochondrial ribosomal protein S15
MRRF mitochondrial ribosome recycling factor
MRS2 MRS2 magnesium transporter
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase
NDUFAF4 NADH dehydrogenase (ubiquinone) complex I, assembly factor 4
NLE1 notchless homolog 1 (Drosophila)
NOC2L nucleolar complex associated 2 homolog (S. cerevisiae)
NOC3L nucleolar complex associated 3 homolog (S. cerevisiae)
NOP53 NOP53 ribosome biogenesis factor
NPC1 Niemann-Pick disease, type C1
NSA2 NSA2 ribosome biogenesis homolog (S. cerevisiae)
NT5DC3 5'-nucleotidase domain containing 3
NUSAP1 nucleolar and spindle associated protein 1
NVL nuclear VCP-like
OPA3 optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)
OSBPL8 oxysterol binding protein-like 8
OXA1L oxidase (cytochrome c) assembly 1-like
PGRMC2 progesterone receptor membrane component 2
POLR1E polymerase (RNA) I polypeptide E, 53kDa
PON2 paraoxonase 2
PRKDC protein kinase, DNA-activated, catalytic polypeptide
PTCD1 pentatricopeptide repeat domain 1
PTRH2 peptidyl-tRNA hydrolase 2
PVR poliovirus receptor
RAB11B RAB11B, member RAS oncogene family
RPF2 ribosome production factor 2 homolog (S. cerevisiae)
RPL7L1 ribosomal protein L7-like 1
SCAMP4 secretory carrier membrane protein 4
SF3B1 splicing factor 3b, subunit 1, 155kDa
SLC25A10 solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10
SLC25A12 solute carrier family 25 (aspartate/glutamate carrier), member 12
SLC39A10 solute carrier family 39 (zinc transporter), member 10
TACO1 translational activator of mitochondrially encoded cytochrome c oxidase I
TFB2M transcription factor B2, mitochondrial
TGFB2 transforming growth factor, beta 2
TIMM10 translocase of inner mitochondrial membrane 10 homolog (yeast)
TIMM13 translocase of inner mitochondrial membrane 13 homolog (yeast)
TIMM50 translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)
TIMM9 translocase of inner mitochondrial membrane 9 homolog (yeast)
TMEM120A transmembrane protein 120A
TMEM245 transmembrane protein 245
TMEM40 transmembrane protein 40
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast)
TOMM22 translocase of outer mitochondrial membrane 22 homolog (yeast)
TOMM5 translocase of outer mitochondrial membrane 5 homolog (yeast)
UBAC1 UBA domain containing 1
VDAC3 voltage-dependent anion channel 3
YME1L1 YME1-like 1 ATPase
ZNF248 zinc finger protein 248

Symbol Name
AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
ALAD aminolevulinate dehydratase
APC2 adenomatosis polyposis coli 2
APOL4 apolipoprotein L, 4
ARHGEF1 Rho guanine nucleotide exchange factor (GEF) 1
ATP11A ATPase, class VI, type 11A
ATXN2 ataxin 2
BCOR BCL6 corepressor
CALB2 calbindin 2
CALCOCO2 calcium binding and coiled-coil domain 2
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase
CCDC71 coiled-coil domain containing 71
CHMP5 charged multivesicular body protein 5
CIB1 calcium and integrin binding 1 (calmyrin)
CLASP2 cytoplasmic linker associated protein 2
CNPY4 canopy FGF signaling regulator 4
CTSS cathepsin S
CWF19L1 CWF19-like 1, cell cycle control (S. pombe)
DCP1A decapping mRNA 1A
DDA1 DET1 and DDB1 associated 1
DNLZ DNL-type zinc finger
DPP3 dipeptidyl-peptidase 3
EDC3 enhancer of mRNA decapping 3
EIF4A2 eukaryotic translation initiation factor 4A2
ENSA endosulfine alpha
FAH fumarylacetoacetate hydrolase (fumarylacetoacetase)
FAM91A1 family with sequence similarity 91, member A1
FCRLA Fc receptor-like A
FLYWCH2 FLYWCH family member 2
FRMD8 FERM domain containing 8
GABARAPL2 GABA(A) receptor-associated protein-like 2
GBF1 golgi brefeldin A resistant guanine nucleotide exchange factor 1
GEMIN4 gem (nuclear organelle) associated protein 4
GOPC golgi-associated PDZ and coiled-coil motif containing
GSS glutathione synthetase
GSTP1 glutathione S-transferase pi 1
GTPBP1 GTP binding protein 1
HK2 hexokinase 2
HSD3B1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1
HSP90AB4P heat shock protein 90kDa alpha (cytosolic), class B member 4, pseudogene
HYI hydroxypyruvate isomerase (putative)
KIAA0100 KIAA0100
LDHB lactate dehydrogenase B
LENG1 leukocyte receptor cluster (LRC) member 1
LRRC27 leucine rich repeat containing 27
LSM12 LSM12 homolog (S. cerevisiae)
MANSC1 MANSC domain containing 1
MARVELD2 MARVEL domain containing 2
MAT2A methionine adenosyltransferase II, alpha
MEMO1 mediator of cell motility 1
METTL1 methyltransferase like 1
MNAT1 MNAT CDK-activating kinase assembly factor 1
MSK32 antigen identified by monoclonal antibody K66
NUBP2 nucleotide binding protein 2
OTUD4 OTU deubiquitinase 4
PABPC1L poly(A) binding protein, cytoplasmic 1-like
PBDC1 polysaccharide biosynthesis domain containing 1
PCYT2 phosphate cytidylyltransferase 2, ethanolamine
PGM1 phosphoglucomutase 1
PIK3C3 phosphatidylinositol 3-kinase, catalytic subunit type 3
PLSCR1 phospholipid scramblase 1
POLA2 polymerase (DNA directed), alpha 2, accessory subunit
PPM1B protein phosphatase, Mg2+/Mn2+ dependent, 1B
PRTFDC1 phosphoribosyl transferase domain containing 1
PTPN12 protein tyrosine phosphatase, non-receptor type 12
PTPRS protein tyrosine phosphatase, receptor type, S
PUS7L pseudouridylate synthase 7 homolog (S. cerevisiae)-like
RBPJ recombination signal binding protein for immunoglobulin kappa J region
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A
RPIA ribose 5-phosphate isomerase A
RWDD1 RWD domain containing 1
SCG2 secretogranin II
SEC16A SEC16 homolog A (S. cerevisiae)
SEC31A SEC31 homolog A (S. cerevisiae)
SETD3 SET domain containing 3
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
SNRNP27 small nuclear ribonucleoprotein 27kDa (U4/U6.U5)
SRBD1 S1 RNA binding domain 1
SRSF2 serine/arginine-rich splicing factor 2
STAMBP STAM binding protein
TAF12 TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa
TAF7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
TARBP1 TAR (HIV-1) RNA binding protein 1
TBC1D15 TBC1 domain family, member 15
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1
TPT1 tumor protein, translationally-controlled 1
TUBAL3 tubulin, alpha-like 3
UBP1 upstream binding protein 1 (LBP-1a)
UBXN7 UBX domain protein 7
UCK2 uridine-cytidine kinase 2
UFM1 ubiquitin-fold modifier 1
UROD uroporphyrinogen decarboxylase
USP16 ubiquitin specific peptidase 16
USP24 ubiquitin specific peptidase 24
USP8 ubiquitin specific peptidase 8
ZNF622 zinc finger protein 622
ZRANB2 zinc finger, RAN-binding domain containing 2