SNU-475 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
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Genes

42 genes with high or low copy number in SNU-475 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
RAD9A RAD9 homolog A (S. pombe) 2.36889
TBC1D10C TBC1 domain family, member 10C 2.36889
SSH3 slingshot protein phosphatase 3 2.36889
POLD4 polymerase (DNA-directed), delta 4, accessory subunit 2.36889
ADRBK1 adrenergic, beta, receptor kinase 1 2.36889
LOC100130987 uncharacterized LOC100130987 2.36889
CLCF1 cardiotrophin-like cytokine factor 1 2.36889
PPP1CA protein phosphatase 1, catalytic subunit, alpha isozyme 2.36889
ANKRD13D ankyrin repeat domain 13 family, member D 2.36889
ALDH3B2 aldehyde dehydrogenase 3 family, member B2 2.36889
ACY3 aminoacylase 3 2.35236
CORO1B coronin, actin binding protein, 1B 2.35236
NUDT8 nudix (nucleoside diphosphate linked moiety X)-type motif 8 2.35236
CABP4 calcium binding protein 4 2.35236
AIP aryl hydrocarbon receptor interacting protein 2.35236
PITPNM1 phosphatidylinositol transfer protein, membrane-associated 1 2.35236
CARNS1 carnosine synthase 1 2.35236
TBX10 T-box 10 2.35236
GPR152 G protein-coupled receptor 152 2.35236
DOC2GP double C2-like domains, gamma, pseudogene 2.35236
CDK2AP2 cyclin-dependent kinase 2 associated protein 2 2.35236
KDM2A lysine (K)-specific demethylase 2A 2.35236
TMEM134 transmembrane protein 134 2.35236
RPS6KB2 ribosomal protein S6 kinase, 70kDa, polypeptide 2 2.35236
PTPRCAP protein tyrosine phosphatase, receptor type, C-associated protein 2.35236
CABP2 calcium binding protein 2 2.35236
GSTP1 glutathione S-transferase pi 1 2.3178
C11ORF72 chromosome 11 open reading frame 72 2.3178
NDUFV1 NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa 2.3178
OR5J2 olfactory receptor, family 5, subfamily J, member 2 2.10177
OR8J3 olfactory receptor, family 8, subfamily J, member 3 2.10038
OR8H2 olfactory receptor, family 8, subfamily H, member 2 2.10038
OR8K5 olfactory receptor, family 8, subfamily K, member 5 2.10038
OR5AS1 olfactory receptor, family 5, subfamily AS, member 1 2.10038
OR8I2 olfactory receptor, family 8, subfamily I, member 2 2.10038
OR8H3 olfactory receptor, family 8, subfamily H, member 3 2.10038
FAM86C2P family with sequence similarity 86, member A pseudogene 2.07822

low copy number

Symbol Name Standardized Value
IQSEC1 IQ motif and Sec7 domain 1 -3.32901
AXIN1 axin 1 -3.24687
AR androgen receptor -3.03592
TBL1X transducin (beta)-like 1X-linked -2.87802
GPR143 G protein-coupled receptor 143 -2.87269