SNU-C1 Gene Set
Genes
25 genes with high or low copy number in SNU-C1 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
high copy number
| Symbol |
Name |
Standardized Value |
|
PDHX
|
pyruvate dehydrogenase complex, component X
|
2.44392
|
|
MIR1343
|
microRNA 1343
|
2.44392
|
|
APIP
|
APAF1 interacting protein
|
2.44392
|
|
SLC1A2
|
solute carrier family 1 (glial high affinity glutamate transporter), member 2
|
2.44392
|
|
CD44
|
CD44 molecule (Indian blood group)
|
2.39327
|
|
C8ORF4
|
chromosome 8 open reading frame 4
|
2.09073
|
low copy number
| Symbol |
Name |
Standardized Value |
|
ARL14EPL
|
ADP-ribosylation factor-like 14 effector protein-like
|
-3.2703
|
|
LVRN
|
laeverin
|
-3.2703
|
|
FEM1C
|
fem-1 homolog c (C. elegans)
|
-3.2703
|
|
AP3S1
|
adaptor-related protein complex 3, sigma 1 subunit
|
-3.2703
|
|
TICAM2
|
toll-like receptor adaptor molecule 2
|
-3.2703
|
|
CDO1
|
cysteine dioxygenase type 1
|
-3.2703
|
|
TMED7
|
transmembrane emp24 protein transport domain containing 7
|
-3.2703
|
|
COMMD10
|
COMM domain containing 10
|
-3.2703
|
|
TMED7-TICAM2
|
TMED7-TICAM2 readthrough
|
-3.2703
|
|
ATG12
|
autophagy related 12
|
-3.2703
|
|
CCDC112
|
coiled-coil domain containing 112
|
-3.11641
|
|
TRIM36
|
tripartite motif containing 36
|
-3.11641
|
|
PGGT1B
|
protein geranylgeranyltransferase type I, beta subunit
|
-3.11641
|
|
KCNN2
|
potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2
|
-3.11641
|
|
MIR605
|
microRNA 605
|
-3.0433
|
|
UGT2B28
|
UDP glucuronosyltransferase 2 family, polypeptide B28
|
-3.04299
|
|
PARK2
|
parkin RBR E3 ubiquitin protein ligase
|
-2.85647
|
|
MACROD2-AS1
|
MACROD2 antisense RNA 1
|
-2.81384
|
|
CES1P1
|
carboxylesterase 1 pseudogene 1
|
-2.74485
|
