SNU387 Gene Set

Dataset CCLE Cell Line Gene Expression Profiles
Category transcriptomics
Type cell line
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Genes

344 genes with high or low expression in SNU387 relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
RAB1B RAB1B, member RAS oncogene family 3.40461
C11ORF24 chromosome 11 open reading frame 24 3.39466
GPR31 G protein-coupled receptor 31 3.37646
BRMS1 breast cancer metastasis suppressor 1 3.36631
CDK2AP2 cyclin-dependent kinase 2 associated protein 2 3.25034
YIF1A Yip1 interacting factor homolog A (S. cerevisiae) 2.92215
PPP1CA protein phosphatase 1, catalytic subunit, alpha isozyme 2.8573
DPP3 dipeptidyl-peptidase 3 2.82107
PKDREJ polycystin (PKD) family receptor for egg jelly 2.79233
PELI3 pellino E3 ubiquitin protein ligase family member 3 2.65496
LRFN4 leucine rich repeat and fibronectin type III domain containing 4 2.61553
FGD5-AS1 FGD5 antisense RNA 1 2.58691
NDUFS8 NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) 2.56194
SPATA4 spermatogenesis associated 4 2.54337
AIP aryl hydrocarbon receptor interacting protein 2.50323
POLD4 polymerase (DNA-directed), delta 4, accessory subunit 2.49127
CLCF1 cardiotrophin-like cytokine factor 1 2.4629
SUV420H1 suppressor of variegation 4-20 homolog 1 (Drosophila) 2.42216
KLRD1 killer cell lectin-like receptor subfamily D, member 1 2.4087
ANAPC15 anaphase promoting complex subunit 15 2.39516
FPR1 formyl peptide receptor 1 2.37586
RPS6KB2 ribosomal protein S6 kinase, 70kDa, polypeptide 2 2.36771
CCS copper chaperone for superoxide dismutase 2.36239
HRH1 histamine receptor H1 2.35869
LINC00410 long intergenic non-protein coding RNA 410 2.35834
FPR2 formyl peptide receptor 2 2.35592
WFDC6 WAP four-disulfide core domain 6 2.35539
ZDHHC24 zinc finger, DHHC-type containing 24 2.33875
KDM2A lysine (K)-specific demethylase 2A 2.33406
NDUFV1 NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa 2.31232
DNAJC25 DnaJ (Hsp40) homolog, subfamily C , member 25 2.31194
MAP10 microtubule-associated protein 10 2.31031
RAD9A RAD9 homolog A (S. pombe) 2.28006
TCIRG1 T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 2.24356
CPT1A carnitine palmitoyltransferase 1A (liver) 2.23997
SEC13 SEC13 homolog (S. cerevisiae) 2.2312
MRPL11 mitochondrial ribosomal protein L11 2.19497
PCDHGB5 protocadherin gamma subfamily B, 5 2.16867
RCE1 Ras converting CAAX endopeptidase 1 2.15393
PPP6R3 protein phosphatase 6, regulatory subunit 3 2.12807
B3GNT1 2.12654
P4HA3 prolyl 4-hydroxylase, alpha polypeptide III 2.10769
BBS1 Bardet-Biedl syndrome 1 2.08826
TUBA4A tubulin, alpha 4a 2.08469
ATP6V1G3 ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3 2.07844
GMPPA GDP-mannose pyrophosphorylase A 2.0747
RIN1 Ras and Rab interactor 1 2.074
PLSCR4 phospholipid scramblase 4 2.06202
YIPF5 Yip1 domain family, member 5 2.04102
CAPN7 calpain 7 2.01139
USP40 ubiquitin specific peptidase 40 2.00802
C9ORF89 chromosome 9 open reading frame 89 2.00035
STARD6 StAR-related lipid transfer (START) domain containing 6 1.98565
EPYC epiphycan 1.97139
PCDH15 protocadherin-related 15 1.97131
ABLIM3 actin binding LIM protein family, member 3 1.95437
RHEB Ras homolog enriched in brain 1.94166
PITPNM1 phosphatidylinositol transfer protein, membrane-associated 1 1.93487
LINC01561 long intergenic non-protein coding RNA 1561 1.93256
LOC339685 uncharacterized LOC339685 1.92929
AZI2 5-azacytidine induced 2 1.92224
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 1.91884
HFE2 hemochromatosis type 2 (juvenile) 1.90629
FDCSP follicular dendritic cell secreted protein 1.90628
RBSN rabenosyn, RAB effector 1.89947
ZBTB12 zinc finger and BTB domain containing 12 1.87616
TEDDM1 transmembrane epididymal protein 1 1.87343
VEGFA vascular endothelial growth factor A 1.84643
PGM3 phosphoglucomutase 3 1.84205
SYNJ2 synaptojanin 2 1.83641
APCDD1L adenomatosis polyposis coli down-regulated 1-like 1.83608
PLP2 proteolipid protein 2 (colonic epithelium-enriched) 1.83229
LOC100130452 uncharacterized LOC100130452 1.82985
HDLBP high density lipoprotein binding protein 1.82807
RAD23B RAD23 homolog B (S. cerevisiae) 1.82698
ARPC4 actin related protein 2/3 complex, subunit 4, 20kDa 1.82002
LOC283914 1.8138
OLIG3 oligodendrocyte transcription factor 3 1.80856
PC pyruvate carboxylase 1.80115
ATXN8OS ATXN8 opposite strand (non-protein coding) 1.78347
RBM4B RNA binding motif protein 4B 1.78083
MYLK2 myosin light chain kinase 2 1.77532
CA3 carbonic anhydrase III 1.75529
RUNX2 runt-related transcription factor 2 1.75406
PTPRK protein tyrosine phosphatase, receptor type, K 1.75371
ERICH6 glutamate-rich 6 1.74802
CHKA choline kinase alpha 1.74095
ATXN1 ataxin 1 1.7356
DCTN3 dynactin 3 (p22) 1.72919
CSN3 casein kappa 1.72688
FOXS1 forkhead box S1 1.71662
PP12613 uncharacterized LOC100192379 1.7081
HECW1-IT1 HECW1 intronic transcript 1 1.70466
HAPLN1 hyaluronan and proteoglycan link protein 1 1.68019
C11ORF80 chromosome 11 open reading frame 80 1.67576
DPH3 diphthamide biosynthesis 3 1.67245
TMEM43 transmembrane protein 43 1.67027
PDCD6IP programmed cell death 6 interacting protein 1.66605
MMP2 matrix metallopeptidase 2 1.66301
HPCAL1 hippocalcin-like 1 1.65681
MSANTD3 Myb/SANT-like DNA-binding domain containing 3 1.65588
ECE1 endothelin converting enzyme 1 1.65588
BPIFB4 BPI fold containing family B, member 4 1.65285
UBTD1 ubiquitin domain containing 1 1.64713
LCE3D late cornified envelope 3D 1.64089
LRP5 low density lipoprotein receptor-related protein 5 1.63903
CALML6 calmodulin-like 6 1.63804
TAGLN2 transgelin 2 1.62972
HJURP Holliday junction recognition protein 1.62081
TNP2 transition protein 2 (during histone to protamine replacement) 1.61419
COL6A3 collagen, type VI, alpha 3 1.60964
XRRA1 X-ray radiation resistance associated 1 1.60193
LSM3 LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) 1.60167
GCM2 glial cells missing homolog 2 (Drosophila) 1.59572
DNPEP aspartyl aminopeptidase 1.58924
SYT12 synaptotagmin XII 1.57991
SLC17A8 solute carrier family 17 (vesicular glutamate transporter), member 8 1.57887
CRTAP cartilage associated protein 1.5682
TATDN2 TatD DNase domain containing 2 1.56505
RNF24 ring finger protein 24 1.55258
C6ORF89 chromosome 6 open reading frame 89 1.55236
CHI3L1 chitinase 3-like 1 (cartilage glycoprotein-39) 1.54943
TOX2 TOX high mobility group box family member 2 1.544
MRPL21 mitochondrial ribosomal protein L21 1.53768
LOC284395 uncharacterized LOC284395 1.53218
CSF1R colony stimulating factor 1 receptor 1.52395
TMEM255B transmembrane protein 255B 1.5231
ARAF A-Raf proto-oncogene, serine/threonine kinase 1.51819
GXYLT2 glucoside xylosyltransferase 2 1.50967
SLC6A7 solute carrier family 6 (neurotransmitter transporter), member 7 1.50584
COL5A1 collagen, type V, alpha 1 1.50487
RARRES2 retinoic acid receptor responder (tazarotene induced) 2 1.50167
NAV1 neuron navigator 1 1.50131
BRK1 BRICK1, SCAR/WAVE actin-nucleating complex subunit 1.49636
OR5V1 olfactory receptor, family 5, subfamily V, member 1 1.49074
EXD1 exonuclease 3'-5' domain containing 1 1.48967
AAMDC adipogenesis associated, Mth938 domain containing 1.48656
FHOD3 formin homology 2 domain containing 3 1.48595
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 1.48512
ATG7 autophagy related 7 1.4845
UNC45B unc-45 homolog B (C. elegans) 1.47852
CALHM3 calcium homeostasis modulator 3 1.46941
LOC284080 uncharacterized LOC284080 1.4692
LAMTOR1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 1.46832
TMEM134 transmembrane protein 134 1.46792
RBM4 RNA binding motif protein 4 1.46756
MMP27 matrix metallopeptidase 27 1.46718
SNTA1 syntrophin, alpha 1 1.46658
TGFBR1 transforming growth factor, beta receptor 1 1.46634
SPRR2C small proline-rich protein 2C (pseudogene) 1.46622
PPARD peroxisome proliferator-activated receptor delta 1.46122
SNAI1 snail family zinc finger 1 1.45994
CORO1B coronin, actin binding protein, 1B 1.45865
FNDC7 fibronectin type III domain containing 7 1.45784
ELK3 ELK3, ETS-domain protein (SRF accessory protein 2) 1.45537
ANKRD13D ankyrin repeat domain 13 family, member D 1.45249
HRCT1 histidine rich carboxyl terminus 1 1.44337
SNX3 sorting nexin 3 1.44271
SH3KBP1 SH3-domain kinase binding protein 1 1.43589
STEAP3 STEAP family member 3, metalloreductase 1.4357
IGHMBP2 immunoglobulin mu binding protein 2 1.43554
RBMS3 RNA binding motif, single stranded interacting protein 3 1.43137
CHRDL2 chordin-like 2 1.43013
NREP neuronal regeneration related protein 1.42886
ANGPTL2 angiopoietin-like 2 1.42796
EBP emopamil binding protein (sterol isomerase) 1.42156
ORAOV1 oral cancer overexpressed 1 1.42093
LOC100506870 1.42061
EPHB2 EPH receptor B2 1.41314
TFE3 transcription factor binding to IGHM enhancer 3 1.40908
EMC3 ER membrane protein complex subunit 3 1.40844
LINC00299 long intergenic non-protein coding RNA 299 1.40798
CTDSP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 1.40732
PKI55 DKFZp434H1419 1.40594
RALB v-ral simian leukemia viral oncogene homolog B 1.40399
COL18A1-AS1 COL18A1 antisense RNA 1 1.40368
GALNT10 polypeptide N-acetylgalactosaminyltransferase 10 1.40134
UNC93B1 unc-93 homolog B1 (C. elegans) 1.3935
ADAMDEC1 ADAM-like, decysin 1 1.39292
C1S complement component 1, s subcomponent 1.39286
ATG9A autophagy related 9A 1.38945
CYP21A2 cytochrome P450, family 21, subfamily A, polypeptide 2 1.38861
E2F7 E2F transcription factor 7 1.38417
PID1 phosphotyrosine interaction domain containing 1 1.38096
PMEPA1 prostate transmembrane protein, androgen induced 1 1.38033
GFPT2 glutamine-fructose-6-phosphate transaminase 2 1.37676
LINC01554 long intergenic non-protein coding RNA 1554 1.37548
KIAA1147 KIAA1147 1.37449
OR5L2 olfactory receptor, family 5, subfamily L, member 2 1.37208
MAP3K2 mitogen-activated protein kinase kinase kinase 2 1.37036
IDO2 indoleamine 2,3-dioxygenase 2 1.36918
CDC25B cell division cycle 25B 1.36787
LOC100506047 uncharacterized LOC100506047 1.36771
SLC22A3 solute carrier family 22 (organic cation transporter), member 3 1.36738
PLBD2 phospholipase B domain containing 2 1.36363
DYNC1LI1 dynein, cytoplasmic 1, light intermediate chain 1 1.36331
PPAPDC1A phosphatidic acid phosphatase type 2 domain containing 1A 1.3631
OR6B1 olfactory receptor, family 6, subfamily B, member 1 1.36289
C11ORF42 chromosome 11 open reading frame 42 1.36033
HDAC11 histone deacetylase 11 1.35959
FGF16 fibroblast growth factor 16 1.35604
TADA3 transcriptional adaptor 3 1.35463
TREM1 triggering receptor expressed on myeloid cells 1 1.35413
SLC46A3 solute carrier family 46, member 3 1.35123

low expression

Symbol Name Standardized Value
CLSTN3 calsyntenin 3 -3.74588
SEPSECS Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase -3.05436
SARS2 seryl-tRNA synthetase 2, mitochondrial -2.67249
SPINK13 serine peptidase inhibitor, Kazal type 13 (putative) -2.63519
TMEM135 transmembrane protein 135 -2.60074
FUK fucokinase -2.57954
C21ORF59 chromosome 21 open reading frame 59 -2.56856
CD244 CD244 molecule, natural killer cell receptor 2B4 -2.5579
ACTR3B ARP3 actin-related protein 3 homolog B (yeast) -2.54489
SDCCAG3 serologically defined colon cancer antigen 3 -2.42855
CLEC2L C-type lectin domain family 2, member L -2.4072
FATE1 fetal and adult testis expressed 1 -2.38348
DNAAF2 dynein, axonemal, assembly factor 2 -2.27201
RFPL1S RFPL1 antisense RNA 1 -2.201
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase -2.1681
RASGRP2 RAS guanyl releasing protein 2 (calcium and DAG-regulated) -2.13758
ADCK1 aarF domain containing kinase 1 -2.13176
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6 -2.12777
PPP1R3D protein phosphatase 1, regulatory subunit 3D -2.1058
GPAM glycerol-3-phosphate acyltransferase, mitochondrial -2.1057
MEPE matrix extracellular phosphoglycoprotein -2.08142
B3GNT2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 -2.07224
MGC57346 ADP-ribosylation factor pseudogene -2.0624
MRPL39 mitochondrial ribosomal protein L39 -2.04703
ABCA9 ATP-binding cassette, sub-family A (ABC1), member 9 -2.03125
LRRC14 leucine rich repeat containing 14 -1.99298
SUPV3L1 suppressor of var1, 3-like 1 (S. cerevisiae) -1.99153
TSHR thyroid stimulating hormone receptor -1.98731
LRG1 leucine-rich alpha-2-glycoprotein 1 -1.94875
ZNF839 zinc finger protein 839 -1.94475
AAGAB alpha- and gamma-adaptin binding protein -1.92564
AMBRA1 autophagy/beclin-1 regulator 1 -1.90753
NDUFV3 NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa -1.88157
THUMPD2 THUMP domain containing 2 -1.87138
UBXN2B UBX domain protein 2B -1.86326
OTX1 orthodenticle homeobox 1 -1.8591
GLCCI1 glucocorticoid induced 1 -1.85684
C11ORF21 chromosome 11 open reading frame 21 -1.85669
YBEY ybeY metallopeptidase (putative) -1.83384
LIM2 lens intrinsic membrane protein 2, 19kDa -1.82283
ZNF430 zinc finger protein 430 -1.81301
CCDC125 coiled-coil domain containing 125 -1.80775
SURF1 surfeit 1 -1.79631
FAR1 fatty acyl CoA reductase 1 -1.7877
COPG2 coatomer protein complex, subunit gamma 2 -1.78604
NFXL1 nuclear transcription factor, X-box binding-like 1 -1.76997
RUNDC1 RUN domain containing 1 -1.76029
USP20 ubiquitin specific peptidase 20 -1.75955
E2F5 E2F transcription factor 5, p130-binding -1.74408
CNNM1 cyclin and CBS domain divalent metal cation transport mediator 1 -1.74386
LRRC75A leucine rich repeat containing 75A -1.74134
PLCXD2 phosphatidylinositol-specific phospholipase C, X domain containing 2 -1.74066
FBXL17 F-box and leucine-rich repeat protein 17 -1.73846
PPP1R13B protein phosphatase 1, regulatory subunit 13B -1.72439
IFNL1 interferon, lambda 1 -1.71619
CCT8 chaperonin containing TCP1, subunit 8 (theta) -1.71169
SCAF4 SR-related CTD-associated factor 4 -1.70582
ZNF675 zinc finger protein 675 -1.70218
PDCD2L programmed cell death 2-like -1.69816
LYPD5 LY6/PLAUR domain containing 5 -1.69628
PEX13 peroxisomal biogenesis factor 13 -1.69575
GGTA1P glycoprotein, alpha-galactosyltransferase 1 pseudogene -1.68213
PMCHL2 pro-melanin-concentrating hormone-like 2, pseudogene -1.6664
LOC100287576 uncharacterized LOC100287576 -1.66632
LOC375196 uncharacterized LOC375196 -1.65412
DUOX2 dual oxidase 2 -1.64823
VWA9 von Willebrand factor A domain containing 9 -1.64107
JMY junction mediating and regulatory protein, p53 cofactor -1.6393
DNAAF3 dynein, axonemal, assembly factor 3 -1.63734
TAF2 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa -1.62861
HAAO 3-hydroxyanthranilate 3,4-dioxygenase -1.61944
ANKRD46 ankyrin repeat domain 46 -1.61639
TAAR1 trace amine associated receptor 1 -1.61292
RPAIN RPA interacting protein -1.60451
PARD6G par-6 family cell polarity regulator gamma -1.60144
ZRANB3 zinc finger, RAN-binding domain containing 3 -1.59536
FHAD1 forkhead-associated (FHA) phosphopeptide binding domain 1 -1.59385
EHMT1 euchromatic histone-lysine N-methyltransferase 1 -1.5866
TDRD9 tudor domain containing 9 -1.58442
TCF24 transcription factor 24 -1.5841
SYNGR2 synaptogyrin 2 -1.58187
CLCN1 chloride channel, voltage-sensitive 1 -1.57981
GMDS GDP-mannose 4,6-dehydratase -1.57957
LY6G6D lymphocyte antigen 6 complex, locus G6D -1.57076
IGHV3-9 immunoglobulin heavy variable 3-9 -1.56075
KCNF1 potassium channel, voltage gated modifier subfamily F, member 1 -1.56023
HEATR9 HEAT repeat containing 9 -1.55876
BCL7A B-cell CLL/lymphoma 7A -1.55852
C17ORF96 chromosome 17 open reading frame 96 -1.55223
IRAK3 interleukin-1 receptor-associated kinase 3 -1.55193
SLC25A2 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2 -1.55173
LOC171391 uncharacterized LOC171391 -1.55084
LINC01599 long intergenic non-protein coding RNA 1599 -1.54688
TRNT1 tRNA nucleotidyl transferase, CCA-adding, 1 -1.54204
C11ORF54 chromosome 11 open reading frame 54 -1.54181
ZNF786 zinc finger protein 786 -1.53655
TREML4 triggering receptor expressed on myeloid cells-like 4 -1.53632
ZNF160 zinc finger protein 160 -1.53153
GTPBP10 GTP-binding protein 10 (putative) -1.53081
ZNF195 zinc finger protein 195 -1.52976
CLDN6 claudin 6 -1.52964
BCAS3 breast carcinoma amplified sequence 3 -1.52932
ZNF579 zinc finger protein 579 -1.52837
TERF1 telomeric repeat binding factor (NIMA-interacting) 1 -1.52691
TNKS2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 -1.5243
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -1.52429
TRAPPC9 trafficking protein particle complex 9 -1.52405
ZNF320 zinc finger protein 320 -1.52185
GPHN gephyrin -1.52009
DUSP13 dual specificity phosphatase 13 -1.51587
ALDH5A1 aldehyde dehydrogenase 5 family, member A1 -1.51473
MRRF mitochondrial ribosome recycling factor -1.50455
LCN8 lipocalin 8 -1.50226
FAM9A family with sequence similarity 9, member A -1.50023
CCDC43 coiled-coil domain containing 43 -1.49881
CAPN13 calpain 13 -1.49573
EPB41L3 erythrocyte membrane protein band 4.1-like 3 -1.4895
TMEM192 transmembrane protein 192 -1.48876
ZNF497 zinc finger protein 497 -1.48673
TTLL10 tubulin tyrosine ligase-like family member 10 -1.48565
FAM53A family with sequence similarity 53, member A -1.48355
RCBTB1 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 -1.48205
CHRNG cholinergic receptor, nicotinic, gamma (muscle) -1.48004
COL25A1 collagen, type XXV, alpha 1 -1.47938
CPSF2 cleavage and polyadenylation specific factor 2, 100kDa -1.47816
LOC339352 cytosolic thiouridylase subunit 1 homolog (S. pombe) pseudogene -1.47723
F12 coagulation factor XII (Hageman factor) -1.47521
RNF112 ring finger protein 112 -1.47422
LOH12CR2 loss of heterozygosity, 12, chromosomal region 2 (non-protein coding) -1.47365
ZNF720 zinc finger protein 720 -1.47097
POLR2G polymerase (RNA) II (DNA directed) polypeptide G -1.46925
METTL14 methyltransferase like 14 -1.4666
PPBPP2 pro-platelet basic protein pseudogene 2 -1.46526
RRN3 RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) -1.46328
SPIB Spi-B transcription factor (Spi-1/PU.1 related) -1.46215
CCDC51 coiled-coil domain containing 51 -1.45842
LOC283335 uncharacterized LOC283335 -1.45675
MED29 mediator complex subunit 29 -1.45503
TSPAN11 tetraspanin 11 -1.45203
VPS41 vacuolar protein sorting 41 homolog (S. cerevisiae) -1.452