SNU398 Gene Set

Dataset CCLE Cell Line Gene Expression Profiles
Category transcriptomics
Type cell line
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Genes

724 genes with high or low expression in SNU398 relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
DAOA-AS1 DAOA antisense RNA 1 3.40844
ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif, 20 3.40823
ZSWIM2 zinc finger, SWIM-type containing 2 3.40796
SPATA2L spermatogenesis associated 2-like 3.40795
CNTNAP4 contactin associated protein-like 4 3.40791
AXIN2 axin 2 3.39938
LOC441666 zinc finger protein 91 pseudogene 3.3299
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 3.15884
ZNF248 zinc finger protein 248 2.99653
PCDH15 protocadherin-related 15 2.95379
ZNF234 zinc finger protein 234 2.92344
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 2.90408
NDUFB8 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa 2.89907
ZNF37A zinc finger protein 37A 2.89551
ZCCHC3 zinc finger, CCHC domain containing 3 2.87224
XRCC3 X-ray repair complementing defective repair in Chinese hamster cells 3 2.82473
ANKRD28 ankyrin repeat domain 28 2.77821
ING2 inhibitor of growth family, member 2 2.74893
TIMM23 translocase of inner mitochondrial membrane 23 homolog (yeast) 2.73882
OXR1 oxidation resistance 1 2.73256
ZC3H14 zinc finger CCCH-type containing 14 2.71987
COIL coilin 2.71895
ZIC1 Zic family member 1 2.71345
ABRA actin binding Rho activating protein 2.68994
EPHA7 EPH receptor A7 2.65495
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 2.65493
CCDC171 coiled-coil domain containing 171 2.65492
ZIC4 Zic family member 4 2.65491
CERS1 ceramide synthase 1 2.63791
TMEM251 transmembrane protein 251 2.57363
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 2.55194
ZNF239 zinc finger protein 239 2.54599
ING5 inhibitor of growth family, member 5 2.51984
CTU2 cytosolic thiouridylase subunit 2 homolog (S. pombe) 2.5035
ABI2 abl-interactor 2 2.50163
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide 2.48594
LOC100507461 uncharacterized LOC100507461 2.45834
SLC30A8 solute carrier family 30 (zinc transporter), member 8 2.40871
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 2.4087
MAGI2-AS3 MAGI2 antisense RNA 3 2.37824
BMS1 BMS1 ribosome biogenesis factor 2.37721
ALX1 ALX homeobox 1 2.36696
NAV3 neuron navigator 3 2.3532
CYB5B cytochrome b5 type B (outer mitochondrial membrane) 2.35258
YAF2 YY1 associated factor 2 2.34513
ELOVL4 ELOVL fatty acid elongase 4 2.34383
CIB3 calcium and integrin binding family member 3 2.3299
MTG1 mitochondrial ribosome-associated GTPase 1 2.32701
BCCIP BRCA2 and CDKN1A interacting protein 2.31857
NANP N-acetylneuraminic acid phosphatase 2.31582
ARL16 ADP-ribosylation factor-like 16 2.28305
NAB2 NGFI-A binding protein 2 (EGR1 binding protein 2) 2.27101
LOC100630918 2.26814
ZSCAN5A zinc finger and SCAN domain containing 5A 2.25995
CCDC160 coiled-coil domain containing 160 2.25277
PTCH1 patched 1 2.24947
FAM171B family with sequence similarity 171, member B 2.23861
MGC12916 uncharacterized protein MGC12916 2.23843
HDAC9 histone deacetylase 9 2.22308
COX20 COX20 cytochrome c oxidase assembly factor 2.21939
LOC730236 uncharacterized LOC730236 2.20579
SMYD5 SMYD family member 5 2.19764
DKK2 dickkopf WNT signaling pathway inhibitor 2 2.18764
GATAD2A GATA zinc finger domain containing 2A 2.17733
FLVCR1-AS1 FLVCR1 antisense RNA 1 (head to head) 2.17665
NDST4 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4 2.13796
CA11 carbonic anhydrase XI 2.13293
WTIP Wilms tumor 1 interacting protein 2.12759
PCDHB5 protocadherin beta 5 2.12732
PDCD11 programmed cell death 11 2.12592
MGC45800 2.12207
LOC442028 uncharacterized LOC442028 2.12203
NPM3 nucleophosmin/nucleoplasmin 3 2.10578
CALCRL calcitonin receptor-like 2.09689
SLC35A4 solute carrier family 35, member A4 2.09221
RERGL RERG/RAS-like 2.08912
PCDH9 protocadherin 9 2.08414
C8ORF37 chromosome 8 open reading frame 37 2.07481
TSPYL1 TSPY-like 1 2.0728
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1 2.05688
SFXN4 sideroflexin 4 2.05029
GCG glucagon 2.04755
KERA keratocan 2.04754
LINC00327 long intergenic non-protein coding RNA 327 2.04731
RBM19 RNA binding motif protein 19 2.03856
PCDHB18P protocadherin beta 18 pseudogene 2.03431
UTF1 undifferentiated embryonic cell transcription factor 1 2.03197
SEC23IP SEC23 interacting protein 2.01641
SNRPB small nuclear ribonucleoprotein polypeptides B and B1 1.99901
RNF40 ring finger protein 40, E3 ubiquitin protein ligase 1.98123
GUF1 GUF1 GTPase homolog (S. cerevisiae) 1.9781
NDUFA13 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 1.97201
OLFM3 olfactomedin 3 1.97139
EPHA6 EPH receptor A6 1.97046
SPNS1 spinster homolog 1 (Drosophila) 1.96699
PCGF1 polycomb group ring finger 1 1.96597
AACSP1 acetoacetyl-CoA synthetase pseudogene 1 1.9659
HEATR6 HEAT repeat containing 6 1.96472
CCDC85A coiled-coil domain containing 85A 1.96228
ZC3H15 zinc finger CCCH-type containing 15 1.95777
ZNF629 zinc finger protein 629 1.95185
GLRX3 glutaredoxin 3 1.94843
RNFT1 ring finger protein, transmembrane 1 1.94821
MRPS9 mitochondrial ribosomal protein S9 1.93569
DDX49 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 1.93509
FAM46A family with sequence similarity 46, member A 1.931
LOC441601 septin 7 pseudogene 1.91902
AUP1 ancient ubiquitous protein 1 1.9175
DDX43 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 1.91557
CC2D2A coiled-coil and C2 domain containing 2A 1.91497
WDR75 WD repeat domain 75 1.91203
POLR1A polymerase (RNA) I polypeptide A, 194kDa 1.91038
RNF17 ring finger protein 17 1.91009
FAM136A family with sequence similarity 136, member A 1.90826
GNAT3 guanine nucleotide binding protein, alpha transducing 3 1.90627
STRADA STE20-related kinase adaptor alpha 1.90547
NOL11 nucleolar protein 11 1.90084
THADA thyroid adenoma associated 1.8865
LHX4 LIM homeobox 4 1.88503
HCG9 HLA complex group 9 (non-protein coding) 1.8834
PCM1 pericentriolar material 1 1.88159
RBBP9 retinoblastoma binding protein 9 1.88052
ZNF696 zinc finger protein 696 1.87646
CTRL chymotrypsin-like 1.87623
GAGE1 G antigen 1 1.87068
CIAPIN1 cytokine induced apoptosis inhibitor 1 1.85836
MRFAP1 Morf4 family associated protein 1 1.85823
ITPK1-AS1 ITPK1 antisense RNA 1 1.85731
ZNF678 zinc finger protein 678 1.85263
C5ORF58 chromosome 5 open reading frame 58 1.85194
SYPL2 synaptophysin-like 2 1.84911
AMDHD1 amidohydrolase domain containing 1 1.84734
SFSWAP splicing factor, suppressor of white-apricot family 1.84592
MCM9 minichromosome maintenance complex component 9 1.83967
CCT7 chaperonin containing TCP1, subunit 7 (eta) 1.83557
ZNF668 zinc finger protein 668 1.83338
STXBP4 syntaxin binding protein 4 1.82979
FANCC Fanconi anemia, complementation group C 1.82777
GPATCH1 G patch domain containing 1 1.82733
AP3M1 adaptor-related protein complex 3, mu 1 subunit 1.8265
RAD51B RAD51 paralog B 1.82012
RBM28 RNA binding motif protein 28 1.81314
FLCN folliculin 1.81105
PLEKHG2 pleckstrin homology domain containing, family G (with RhoGef domain) member 2 1.80816
TEX15 testis expressed 15 1.80718
CCDC102A coiled-coil domain containing 102A 1.80665
NCAM2 neural cell adhesion molecule 2 1.80556
WDR17 WD repeat domain 17 1.80295
TET1 tet methylcytosine dioxygenase 1 1.79568
PCDHB3 protocadherin beta 3 1.79456
RGS9BP regulator of G protein signaling 9 binding protein 1.77997
NOL12 nucleolar protein 12 1.77656
HOXD13 homeobox D13 1.77527
PIK3C2G phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 gamma 1.77515
ZNF804A zinc finger protein 804A 1.77305
CHST10 carbohydrate sulfotransferase 10 1.7723
C19ORF40 chromosome 19 open reading frame 40 1.76908
DESI2 desumoylating isopeptidase 2 1.76885
H2AFY2 H2A histone family, member Y2 1.76878
KXD1 KxDL motif containing 1 1.76643
CEP112 centrosomal protein 112kDa 1.76537
RTCB RNA 2',3'-cyclic phosphate and 5'-OH ligase 1.75651
PDGFRL platelet-derived growth factor receptor-like 1.7534
EPYC epiphycan 1.74328
SSBP4 single stranded DNA binding protein 4 1.74315
SETD3 SET domain containing 3 1.7427
HIRA histone cell cycle regulator 1.74189
ALDH7A1 aldehyde dehydrogenase 7 family, member A1 1.74068
PSMF1 proteasome (prosome, macropain) inhibitor subunit 1 (PI31) 1.74067
NFU1 NFU1 iron-sulfur cluster scaffold 1.73814
RPL27A ribosomal protein L27a 1.73396
CDC34 cell division cycle 34 1.73393
PRR19 proline rich 19 1.73349
SH2B1 SH2B adaptor protein 1 1.73206
LRPPRC leucine-rich pentatricopeptide repeat containing 1.72777
CCDC142 coiled-coil domain containing 142 1.72585
ADGRE3 adhesion G protein-coupled receptor E3 1.72249
COX10 COX10 heme A:farnesyltransferase cytochrome c oxidase assembly factor 1.71829
NOC3L nucleolar complex associated 3 homolog (S. cerevisiae) 1.71734
ZNF473 zinc finger protein 473 1.71639
NOLC1 nucleolar and coiled-body phosphoprotein 1 1.71566
TWIST1 twist family bHLH transcription factor 1 1.71538
RUFY2 RUN and FYVE domain containing 2 1.70903
NDUFC1 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa 1.70757
KCNIP2 Kv channel interacting protein 2 1.70704
FAM198B family with sequence similarity 198, member B 1.70578
DDX19A DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A 1.70535
NCAPH non-SMC condensin I complex, subunit H 1.7021
MCRS1 microspherule protein 1 1.69788
MVD mevalonate (diphospho) decarboxylase 1.69766
DDX55 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 1.69365
MRPS5 mitochondrial ribosomal protein S5 1.69083
TPTE transmembrane phosphatase with tensin homology 1.68471
MGC16275 uncharacterized protein MGC16275 1.68414
POLG2 polymerase (DNA directed), gamma 2, accessory subunit 1.67918
TUBGCP2 tubulin, gamma complex associated protein 2 1.6789
DPCD deleted in primary ciliary dyskinesia homolog (mouse) 1.67824
PLAC8L1 PLAC8-like 1 1.67778
SIN3B SIN3 transcription regulator family member B 1.67774
CCT4 chaperonin containing TCP1, subunit 4 (delta) 1.67495
PTRH2 peptidyl-tRNA hydrolase 2 1.67254
NKX6-1 NK6 homeobox 1 1.67152
TEX261 testis expressed 261 1.66922
DNM3OS DNM3 opposite strand/antisense RNA 1.6687
CUTC cutC copper transporter 1.66679
ZNF142 zinc finger protein 142 1.66352
LOC100505555 uncharacterized LOC100505555 1.66265
GCFC2 GC-rich sequence DNA-binding factor 2 1.66231
TFAM transcription factor A, mitochondrial 1.66182
THAP11 THAP domain containing 11 1.66165
MRPL19 mitochondrial ribosomal protein L19 1.6611
LETM1 leucine zipper-EF-hand containing transmembrane protein 1 1.66023
SLC17A7 solute carrier family 17 (vesicular glutamate transporter), member 7 1.65767
LYRM4 LYR motif containing 4 1.65765
CAPN7 calpain 7 1.6565
HSPA4 heat shock 70kDa protein 4 1.65472
CDO1 cysteine dioxygenase type 1 1.6544
MARK3 MAP/microtubule affinity-regulating kinase 3 1.65289
LOC339975 uncharacterized LOC339975 1.65279
PRKD3 protein kinase D3 1.64839
DMRTC2 DMRT-like family C2 1.64495
STK32C serine/threonine kinase 32C 1.64092
C14ORF80 chromosome 14 open reading frame 80 1.63907
LINC01553 long intergenic non-protein coding RNA 1553 1.63744
NIF3L1 NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) 1.63743
CSRNP3 cysteine-serine-rich nuclear protein 3 1.63589
CHRAC1 chromatin accessibility complex 1 1.6354
USP39 ubiquitin specific peptidase 39 1.63415
CBX2 chromobox homolog 2 1.63186
RFPL2 ret finger protein-like 2 1.63184
ESX1 ESX homeobox 1 1.631
ECD ecdysoneless homolog (Drosophila) 1.62965
SYMPK symplekin 1.62876
ITPA inosine triphosphatase (nucleoside triphosphate pyrophosphatase) 1.62503
APRT adenine phosphoribosyltransferase 1.61842
VN1R2 vomeronasal 1 receptor 2 1.6169
TUBD1 tubulin, delta 1 1.61622
IMMT inner membrane protein, mitochondrial 1.61596
RPS19BP1 ribosomal protein S19 binding protein 1 1.61208
MARCH5 membrane-associated ring finger (C3HC4) 5 1.61187
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D 1.60882
ASPNAT aspartate N-acetyltransferase 1.60658
SF3B6 splicing factor 3b, subunit 6, 14kDa 1.60615
EXOSC7 exosome component 7 1.60552
GRWD1 glutamate-rich WD repeat containing 1 1.60298
FAM204A family with sequence similarity 204, member A 1.60128
MED28 mediator complex subunit 28 1.60114
PSMC5 proteasome (prosome, macropain) 26S subunit, ATPase, 5 1.60074
MYO16 myosin XVI 1.59945
RTN4R reticulon 4 receptor 1.59704
PRPF31 pre-mRNA processing factor 31 1.59655
CECR7 cat eye syndrome chromosome region, candidate 7 (non-protein coding) 1.5944
LAMC3 laminin, gamma 3 1.59319
DDX21 DEAD (Asp-Glu-Ala-Asp) box helicase 21 1.59299
HSD17B14 hydroxysteroid (17-beta) dehydrogenase 14 1.58685
CASC10 cancer susceptibility candidate 10 1.58625
KCNG3 potassium channel, voltage gated modifier subfamily G, member 3 1.58473
ATP5F1 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1 1.58443
PANX3 pannexin 3 1.58193
MKKS McKusick-Kaufman syndrome 1.58037
DCAF16 DDB1 and CUL4 associated factor 16 1.57931
GRIA2 glutamate receptor, ionotropic, AMPA 2 1.57901
PEX2 peroxisomal biogenesis factor 2 1.57877
LRP3 low density lipoprotein receptor-related protein 3 1.57839
TRMT112 tRNA methyltransferase 11-2 homolog (S. cerevisiae) 1.57803
LRRC4C leucine rich repeat containing 4C 1.57602
BMPR1A bone morphogenetic protein receptor, type IA 1.57565
LOC284950 uncharacterized LOC284950 1.57032
SNRNP70 small nuclear ribonucleoprotein 70kDa (U1) 1.57005
ARL3 ADP-ribosylation factor-like 3 1.56881
EDNRA endothelin receptor type A 1.56803
SLIT2 slit homolog 2 (Drosophila) 1.56799
PRKACB protein kinase, cAMP-dependent, catalytic, beta 1.56737
RPS24 ribosomal protein S24 1.56627
SMNDC1 survival motor neuron domain containing 1 1.56522
TARBP2 TAR (HIV-1) RNA binding protein 2 1.56372
C11ORF48 1.56259
THUMPD3 THUMP domain containing 3 1.56219
FBXL19 F-box and leucine-rich repeat protein 19 1.56177
NDUFS3 NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase) 1.55972
RPL38 ribosomal protein L38 1.55931
HRK harakiri, BCL2 interacting protein 1.55612
TIMM10B translocase of inner mitochondrial membrane 10 homolog B (yeast) 1.55572
ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) 1.55058
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 1.54508
MUSK muscle, skeletal, receptor tyrosine kinase 1.54452
TRPS1 trichorhinophalangeal syndrome I 1.54423
ZNF143 zinc finger protein 143 1.54043
METTL23 methyltransferase like 23 1.53939
MRPL35 mitochondrial ribosomal protein L35 1.53865
C22ORF39 chromosome 22 open reading frame 39 1.53689
UTP18 UTP18 small subunit (SSU) processome component homolog (yeast) 1.53674
USP34 ubiquitin specific peptidase 34 1.53669
NUDT14 nudix (nucleoside diphosphate linked moiety X)-type motif 14 1.53023
NSMCE4A non-SMC element 4 homolog A (S. cerevisiae) 1.52852
NDUFB1 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa 1.5273
WIF1 WNT inhibitory factor 1 1.52715
MEOX2 mesenchyme homeobox 2 1.52704
FAM26E family with sequence similarity 26, member E 1.52586
CINP cyclin-dependent kinase 2 interacting protein 1.52108
PIGC phosphatidylinositol glycan anchor biosynthesis, class C 1.51905
PCDHGB7 protocadherin gamma subfamily B, 7 1.51677
EXOC6 exocyst complex component 6 1.51652
IFIH1 interferon induced with helicase C domain 1 1.5155
C14ORF2 chromosome 14 open reading frame 2 1.51542
RBM20 RNA binding motif protein 20 1.51393
EMX1 empty spiracles homeobox 1 1.51042
RPL31 ribosomal protein L31 1.50896
PRMT3 protein arginine methyltransferase 3 1.5064
LOC730098 uncharacterized LOC730098 1.50561
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 1.50523
CNPY1 canopy FGF signaling regulator 1 1.5049
PPRC1 peroxisome proliferator-activated receptor gamma, coactivator-related 1 1.50416
RND2 Rho family GTPase 2 1.50314
FAM195B family with sequence similarity 195, member B 1.50151
VARS2 valyl-tRNA synthetase 2, mitochondrial 1.50149
CECR5 cat eye syndrome chromosome region, candidate 5 1.49939
FUS FUS RNA binding protein 1.49808
KLHDC4 kelch domain containing 4 1.49507
BIRC5 baculoviral IAP repeat containing 5 1.4945
MRPS7 mitochondrial ribosomal protein S7 1.49224
MRPL27 mitochondrial ribosomal protein L27 1.49115
SERTAD1 SERTA domain containing 1 1.49083
GLRX5 glutaredoxin 5 1.49003
TMEM59L transmembrane protein 59-like 1.48641
CDC7 cell division cycle 7 1.48616
CSPG5 chondroitin sulfate proteoglycan 5 (neuroglycan C) 1.48441
LOC100506331 uncharacterized LOC100506331 1.48423
RFTN2 raftlin family member 2 1.48336
SKIDA1 SKI/DACH domain containing 1 1.48033
EIF4E2 eukaryotic translation initiation factor 4E family member 2 1.47927
DNAJC2 DnaJ (Hsp40) homolog, subfamily C, member 2 1.47899
COL3A1 collagen, type III, alpha 1 1.47785
DOCK3 dedicator of cytokinesis 3 1.47773
GBX2 gastrulation brain homeobox 2 1.47657
TPGS1 tubulin polyglutamylase complex subunit 1 1.47648
PPM1J protein phosphatase, Mg2+/Mn2+ dependent, 1J 1.47617
DOCK1 dedicator of cytokinesis 1 1.47602
PDRG1 p53 and DNA-damage regulated 1 1.47423
DUSP19 dual specificity phosphatase 19 1.47253
GABRD gamma-aminobutyric acid (GABA) A receptor, delta 1.47184
SPRED2 sprouty-related, EVH1 domain containing 2 1.47074
TUFM Tu translation elongation factor, mitochondrial 1.4695
C2ORF44 chromosome 2 open reading frame 44 1.46686
FAM175B family with sequence similarity 175, member B 1.46624
NUP160 nucleoporin 160kDa 1.46312
NOP16 NOP16 nucleolar protein 1.46112
INO80E INO80 complex subunit E 1.45998
PHB prohibitin 1.45852
NIP7 NIP7, nucleolar pre-rRNA processing protein 1.4585
ATF1 activating transcription factor 1 1.45683
SAGE1 sarcoma antigen 1 1.456
PEX26 peroxisomal biogenesis factor 26 1.45542
LRP4 low density lipoprotein receptor-related protein 4 1.4552
ATXN7L2 ataxin 7-like 2 1.4548
SAE1 SUMO1 activating enzyme subunit 1 1.4536
KIAA0141 KIAA0141 1.45359
HELLS helicase, lymphoid-specific 1.45277
WDR35 WD repeat domain 35 1.45167
SLC30A3 solute carrier family 30 (zinc transporter), member 3 1.45112
CPSF2 cleavage and polyadenylation specific factor 2, 100kDa 1.45108
RRP12 ribosomal RNA processing 12 homolog (S. cerevisiae) 1.44707
ANKRD30A ankyrin repeat domain 30A 1.44685
PRR14 proline rich 14 1.44591
EXOSC4 exosome component 4 1.44557
NOL10 nucleolar protein 10 1.44306
TCTN3 tectonic family member 3 1.44304
ZNF689 zinc finger protein 689 1.44107
FBXL12 F-box and leucine-rich repeat protein 12 1.44002
SERPINB11 serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene) 1.43817
RPS27A ribosomal protein S27a 1.4344
SUGP1 SURP and G patch domain containing 1 1.43286
PROK1 prokineticin 1 1.43282
LOC100130992 uncharacterized LOC100130992 1.4318
PEPD peptidase D 1.4311
COX8A cytochrome c oxidase subunit VIIIA (ubiquitous) 1.43067
ATXN2 ataxin 2 1.42998
ZIM2 zinc finger, imprinted 2 1.42875
TOMM40L translocase of outer mitochondrial membrane 40 homolog (yeast)-like 1.42464
EP300 E1A binding protein p300 1.42121
DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 1.41946
MORN2 MORN repeat containing 2 1.41943
OLFML1 olfactomedin-like 1 1.41914
PGBDF plakoglobin binding and degradation factor 1.41788
PEG3-AS1 PEG3 antisense RNA 1 1.41721
CECR5-AS1 CECR5 antisense RNA 1 1.41475
AMZ2P1 archaelysin family metallopeptidase 2 pseudogene 1 1.4129
PIFO primary cilia formation 1.41284
FGF20 fibroblast growth factor 20 1.4121
SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 18kDa 1.41062
TMEM11 transmembrane protein 11 1.41054
ADRA2C adrenoceptor alpha 2C 1.40997
FAM178A family with sequence similarity 178, member A 1.40995
IDH3B isocitrate dehydrogenase 3 (NAD+) beta 1.40894
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1 1.40718
DDX42 DEAD (Asp-Glu-Ala-Asp) box helicase 42 1.40678
TBC1D12 TBC1 domain family, member 12 1.40629
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 1.40349
PCBP1 poly(rC) binding protein 1 1.4021
MGME1 mitochondrial genome maintenance exonuclease 1 1.39935
C19ORF48 chromosome 19 open reading frame 48 1.39808
CWF19L1 CWF19-like 1, cell cycle control (S. pombe) 1.39764
PHF2P1 PHD finger protein 2 pseudogene 1 1.39756
PNPT1 polyribonucleotide nucleotidyltransferase 1 1.39656
SGCG sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein) 1.39639
FKBP8 FK506 binding protein 8, 38kDa 1.39365
EIF5 eukaryotic translation initiation factor 5 1.39326
BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 1.39267
LRRC46 leucine rich repeat containing 46 1.38915
ETF1 eukaryotic translation termination factor 1 1.38885
MSH2 mutS homolog 2 1.38605
TATDN2 TatD DNase domain containing 2 1.3858
TMEM161A transmembrane protein 161A 1.38532
SPRY2 sprouty homolog 2 (Drosophila) 1.38517
DGCR8 DGCR8 microprocessor complex subunit 1.38359
ABCA11P ATP-binding cassette, sub-family A (ABC1), member 11, pseudogene 1.38286
ZNF561 zinc finger protein 561 1.38251
USP51 ubiquitin specific peptidase 51 1.38103
BMP5 bone morphogenetic protein 5 1.38071
SNRPF small nuclear ribonucleoprotein polypeptide F 1.38039
NDUFAF5 NADH dehydrogenase (ubiquinone) complex I, assembly factor 5 1.38022
HDDC2 HD domain containing 2 1.37888
STX5 syntaxin 5 1.37878
RBPMS2 RNA binding protein with multiple splicing 2 1.37798
NR2E1 nuclear receptor subfamily 2, group E, member 1 1.37725
SOX12 SRY (sex determining region Y)-box 12 1.37456
ATP13A1 ATPase type 13A1 1.37388
CDC14B cell division cycle 14B 1.37381
SH3GL1 SH3-domain GRB2-like 1 1.37364
RPE ribulose-5-phosphate-3-epimerase 1.37176
PRDM6 PR domain containing 6 1.36905
ZNF503-AS2 ZNF503 antisense RNA 2 1.36897
CADM2 cell adhesion molecule 2 1.366
ISYNA1 inositol-3-phosphate synthase 1 1.36431
COL21A1 collagen, type XXI, alpha 1 1.36398
ZNF354A zinc finger protein 354A 1.36244
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 1.35973
EXD1 exonuclease 3'-5' domain containing 1 1.35827
PHF6 PHD finger protein 6 1.3581
NUDT13 nudix (nucleoside diphosphate linked moiety X)-type motif 13 1.35659
PEG3 paternally expressed 3 1.35206
VEGFC vascular endothelial growth factor C 1.35163
PARP2 poly (ADP-ribose) polymerase 2 1.35105
PAPOLA poly(A) polymerase alpha 1.35067
MIEF1 mitochondrial elongation factor 1 1.34889
BUD31 BUD31 homolog (S. cerevisiae) 1.34782
ZNF485 zinc finger protein 485 1.34721

low expression

Symbol Name Standardized Value
HERPUD2 HERPUD family member 2 -3.94083
TSC2 tuberous sclerosis 2 -3.33015
SPSB3 splA/ryanodine receptor domain and SOCS box containing 3 -3.27554
GPAM glycerol-3-phosphate acyltransferase, mitochondrial -3.0898
LOC286359 uncharacterized LOC286359 -2.90744
TDRD10 tudor domain containing 10 -2.88682
NUDCD3 NudC domain containing 3 -2.85401
DIS3L2 DIS3 like 3'-5' exoribonuclease 2 -2.74977
ANKRA2 ankyrin repeat, family A (RFXANK-like), 2 -2.71571
SLC23A1 solute carrier family 23 (ascorbic acid transporter), member 1 -2.70414
ALDH16A1 aldehyde dehydrogenase 16 family, member A1 -2.65865
LOC100507165 -2.64743
IL10RB interleukin 10 receptor, beta -2.63382
USE1 unconventional SNARE in the ER 1 homolog (S. cerevisiae) -2.62845
DNASE1L1 deoxyribonuclease I-like 1 -2.57873
APLNR apelin receptor -2.57729
CHADL chondroadherin-like -2.56325
HTR6 5-hydroxytryptamine (serotonin) receptor 6, G protein-coupled -2.55949
RBM23 RNA binding motif protein 23 -2.55212
TCHP trichoplein, keratin filament binding -2.55152
FGGY FGGY carbohydrate kinase domain containing -2.55137
ARMCX3 armadillo repeat containing, X-linked 3 -2.50153
LMBRD1 LMBR1 domain containing 1 -2.49354
STK32A serine/threonine kinase 32A -2.46265
BOLL boule-like RNA-binding protein -2.45624
PIH1D1 PIH1 domain containing 1 -2.37725
RNF113A ring finger protein 113A -2.37213
MORN3 MORN repeat containing 3 -2.36235
PP12719 uncharacterized LOC100653022 -2.34222
KIAA1683 KIAA1683 -2.31204
PLA2G5 phospholipase A2, group V -2.30858
PARP10 poly (ADP-ribose) polymerase family, member 10 -2.30283
TP53I13 tumor protein p53 inducible protein 13 -2.27268
STPG2 sperm-tail PG-rich repeat containing 2 -2.27132
TRIM56 tripartite motif containing 56 -2.25642
CFHR5 complement factor H-related 5 -2.24485
LYSMD3 LysM, putative peptidoglycan-binding, domain containing 3 -2.23305
BTBD6 BTB (POZ) domain containing 6 -2.23007
LIMK2 LIM domain kinase 2 -2.22628
XDH xanthine dehydrogenase -2.22425
C1QTNF1 C1q and tumor necrosis factor related protein 1 -2.22027
GADD45A growth arrest and DNA-damage-inducible, alpha -2.21719
LOC100507403 uncharacterized LOC100507403 -2.21592
SFXN3 sideroflexin 3 -2.21535
KDSR 3-ketodihydrosphingosine reductase -2.20647
SRC SRC proto-oncogene, non-receptor tyrosine kinase -2.18488
JMJD8 jumonji domain containing 8 -2.1808
SLAMF8 SLAM family member 8 -2.17763
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -2.17268
NQO1 NAD(P)H dehydrogenase, quinone 1 -2.15599
HAND1 heart and neural crest derivatives expressed 1 -2.15432
FCER1G Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide -2.12974
DACT2 dishevelled-binding antagonist of beta-catenin 2 -2.12733
BCAT2 branched chain amino-acid transaminase 2, mitochondrial -2.11806
ZNF512 zinc finger protein 512 -2.09777
VPS4B vacuolar protein sorting 4 homolog B (S. cerevisiae) -2.09265
LOC100506431 B2 RNA -2.09241
NT5C3B 5'-nucleotidase, cytosolic IIIB -2.08723
MKNK2 MAP kinase interacting serine/threonine kinase 2 -2.08565
NRIP2 nuclear receptor interacting protein 2 -2.08012
TNFRSF9 tumor necrosis factor receptor superfamily, member 9 -2.07841
ANO2 anoctamin 2, calcium activated chloride channel -2.06991
PKD1 polycystic kidney disease 1 (autosomal dominant) -2.06925
FAS-AS1 FAS antisense RNA 1 -2.06502
DRC1 dynein regulatory complex subunit 1 -2.06019
TEX40 testis expressed 40 -2.0539
ATP9B ATPase, class II, type 9B -2.05008
PLIN5 perilipin 5 -2.04846
TRAF3IP2 TRAF3 interacting protein 2 -2.04098
PAQR7 progestin and adipoQ receptor family member VII -2.03879
PIGB phosphatidylinositol glycan anchor biosynthesis, class B -2.02129
C1ORF204 chromosome 1 open reading frame 204 -2.01922
PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 -1.99991
RNF207 ring finger protein 207 -1.9889
TMEM92 transmembrane protein 92 -1.98664
H2AFV H2A histone family, member V -1.97729
SNHG15 small nucleolar RNA host gene 15 -1.97079
RALA v-ral simian leukemia viral oncogene homolog A (ras related) -1.96534
MPZ myelin protein zero -1.9588
ZMYM6NB ZMYM6 neighbor -1.95432
CASC15 cancer susceptibility candidate 15 (non-protein coding) -1.95404
CD1B CD1b molecule -1.93437
LOC100507194 uncharacterized LOC100507194 -1.93099
DIRAS3 DIRAS family, GTP-binding RAS-like 3 -1.92901
CD177 CD177 molecule -1.9228
IRF6 interferon regulatory factor 6 -1.91966
ARSK arylsulfatase family, member K -1.91207
LOC643733 caspase 4, apoptosis-related cysteine peptidase pseudogene -1.91069
TAF7L TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa -1.8996
DDO D-aspartate oxidase -1.89952
BDH1 3-hydroxybutyrate dehydrogenase, type 1 -1.89625
KIAA1755 KIAA1755 -1.89006
CSRP1 cysteine and glycine-rich protein 1 -1.88653
TMEM62 transmembrane protein 62 -1.88433
NIPAL3 NIPA-like domain containing 3 -1.87933
CUL9 cullin 9 -1.87688
CDK13 cyclin-dependent kinase 13 -1.87125
ROPN1 rhophilin associated tail protein 1 -1.87023
RLN2 relaxin 2 -1.85895
RLN1 relaxin 1 -1.85881
LPO lactoperoxidase -1.85801
UCP3 uncoupling protein 3 (mitochondrial, proton carrier) -1.85223
SHISA5 shisa family member 5 -1.84443
TMEM245 transmembrane protein 245 -1.84289
CD226 CD226 molecule -1.84202
LOC100507530 -1.84087
UBL4A ubiquitin-like 4A -1.84049
FBXO4 F-box protein 4 -1.83565
LINC00474 long intergenic non-protein coding RNA 474 -1.83091
PLEKHM1 pleckstrin homology domain containing, family M (with RUN domain) member 1 -1.82563
PROCA1 protein interacting with cyclin A1 -1.8248
PGAM2 phosphoglycerate mutase 2 (muscle) -1.8234
IL27 interleukin 27 -1.81763
PSME1 proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) -1.81546
PTH1R parathyroid hormone 1 receptor -1.81328
TMEM161B transmembrane protein 161B -1.81262
P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) -1.80811
LRFN4 leucine rich repeat and fibronectin type III domain containing 4 -1.8027
URGCP upregulator of cell proliferation -1.79673
GZMK granzyme K (granzyme 3; tryptase II) -1.79494
C2ORF40 chromosome 2 open reading frame 40 -1.79258
ARTN artemin -1.79161
S100A11 S100 calcium binding protein A11 -1.78929
CYP2U1 cytochrome P450, family 2, subfamily U, polypeptide 1 -1.78597
COQ5 coenzyme Q5 homolog, methyltransferase (S. cerevisiae) -1.78461
CDH17 cadherin 17, LI cadherin (liver-intestine) -1.78102
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -1.77531
CLNK cytokine-dependent hematopoietic cell linker -1.77352
LOC100130950 uncharacterized LOC100130950 -1.77225
CPZ carboxypeptidase Z -1.76592
GYS1 glycogen synthase 1 (muscle) -1.75978
CCDC169 coiled-coil domain containing 169 -1.75554
PCDH12 protocadherin 12 -1.7507
ZSCAN30 zinc finger and SCAN domain containing 30 -1.75057
COASY CoA synthase -1.74234
SCGB1D1 secretoglobin, family 1D, member 1 -1.74024
CLEC3B C-type lectin domain family 3, member B -1.73547
ABHD15 abhydrolase domain containing 15 -1.73517
CMYA5 cardiomyopathy associated 5 -1.73469
GAL3ST1 galactose-3-O-sulfotransferase 1 -1.73118
FLT3LG fms-related tyrosine kinase 3 ligand -1.72983
DAPK2 death-associated protein kinase 2 -1.72916
DLG3 discs, large homolog 3 (Drosophila) -1.72818
GLYATL1 glycine-N-acyltransferase-like 1 -1.72595
NBR1 neighbor of BRCA1 gene 1 -1.72067
ADGRE5 adhesion G protein-coupled receptor E5 -1.72059
BSDC1 BSD domain containing 1 -1.71994
MAP2K1 mitogen-activated protein kinase kinase 1 -1.71968
OR10A3 olfactory receptor, family 10, subfamily A, member 3 -1.71882
CPN1 carboxypeptidase N, polypeptide 1 -1.71004
ERVFRD-1 endogenous retrovirus group FRD, member 1 -1.70679
CSN2 casein beta -1.69114
NEFH neurofilament, heavy polypeptide -1.68354
DHTKD1 dehydrogenase E1 and transketolase domain containing 1 -1.68042
FAM151A family with sequence similarity 151, member A -1.68029
MGC16025 uncharacterized LOC85009 -1.67896
PPP2R2B protein phosphatase 2, regulatory subunit B, beta -1.67579
HIST1H3A histone cluster 1, H3a -1.67449
MROH2B maestro heat-like repeat family member 2B -1.67418
TXNIP thioredoxin interacting protein -1.67156
UBE2D4 ubiquitin-conjugating enzyme E2D 4 (putative) -1.66721
GAL3ST2 galactose-3-O-sulfotransferase 2 -1.66626
TREML4 triggering receptor expressed on myeloid cells-like 4 -1.65779
RHOT1 ras homolog family member T1 -1.65592
TFAP2E transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon) -1.65524
TBC1D22A TBC1 domain family, member 22A -1.6518
BAALC-AS2 BAALC antisense RNA 2 -1.65043
PNPLA8 patatin-like phospholipase domain containing 8 -1.64957
PAQR8 progestin and adipoQ receptor family member VIII -1.64707
LDHB lactate dehydrogenase B -1.64635
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 -1.64602
RP2 retinitis pigmentosa 2 (X-linked recessive) -1.6453
HAO2 hydroxyacid oxidase 2 (long chain) -1.64454
SERPINA5 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 -1.64231
TMEM31 transmembrane protein 31 -1.64119
ADAM5 ADAM metallopeptidase domain 5 (pseudogene) -1.63444
OGDH oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) -1.63103
UBXN4 UBX domain protein 4 -1.62872
LINC00901 long intergenic non-protein coding RNA 901 -1.626
KRBOX1 KRAB box domain containing 1 -1.625
IFNLR1 interferon, lambda receptor 1 -1.62416
ZNRF2 zinc and ring finger 2, E3 ubiquitin protein ligase -1.6226
TRIM38 tripartite motif containing 38 -1.6208
TLX1 T-cell leukemia homeobox 1 -1.61174
GSTP1 glutathione S-transferase pi 1 -1.60645
LPIN1 lipin 1 -1.60509
USHBP1 Usher syndrome 1C binding protein 1 -1.60231
MBLAC2 metallo-beta-lactamase domain containing 2 -1.59405
FXYD3 FXYD domain containing ion transport regulator 3 -1.59224
MTMR11 myotubularin related protein 11 -1.59209
IKBKE inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon -1.59073
FAM99B family with sequence similarity 99, member B (non-protein coding) -1.58606
NPHS2 nephrosis 2, idiopathic, steroid-resistant (podocin) -1.58283
SMR3A submaxillary gland androgen regulated protein 3A -1.58242
C1RL-AS1 C1RL antisense RNA 1 -1.58166
TMEM187 transmembrane protein 187 -1.58003
UCA1 urothelial cancer associated 1 (non-protein coding) -1.57927
PTPN18 protein tyrosine phosphatase, non-receptor type 18 (brain-derived) -1.57785
TSGA10IP testis specific, 10 interacting protein -1.57696
TRIM61 tripartite motif containing 61 -1.5764
OR2F1 olfactory receptor, family 2, subfamily F, member 1 (gene/pseudogene) -1.57597
FAM219A family with sequence similarity 219, member A -1.5748
UBD ubiquitin D -1.57431
PLCXD1 phosphatidylinositol-specific phospholipase C, X domain containing 1 -1.57304
GDF5 growth differentiation factor 5 -1.57256
ZNF350 zinc finger protein 350 -1.57255
GRAP GRB2-related adaptor protein -1.57051
DAP death-associated protein -1.56718
PIM3 Pim-3 proto-oncogene, serine/threonine kinase -1.5632
HAGH hydroxyacylglutathione hydrolase -1.56109
WDTC1 WD and tetratricopeptide repeats 1 -1.56096
IL3 interleukin 3 -1.55724
SLC5A10 solute carrier family 5 (sodium/sugar cotransporter), member 10 -1.55579
LY86 lymphocyte antigen 86 -1.55567
SLC41A3 solute carrier family 41, member 3 -1.55384
KIR2DL4 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 4 -1.55046
FAM174A family with sequence similarity 174, member A -1.54859
SLC17A3 solute carrier family 17 (organic anion transporter), member 3 -1.54564
PPIA peptidylprolyl isomerase A (cyclophilin A) -1.54451
KRCC1 lysine-rich coiled-coil 1 -1.5426
TSPEAR-AS2 TSPEAR antisense RNA 2 -1.5416
PEX6 peroxisomal biogenesis factor 6 -1.54002
SUN2 Sad1 and UNC84 domain containing 2 -1.53966
BECN1 beclin 1, autophagy related -1.53611
TCIRG1 T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 -1.53323
THEM4 thioesterase superfamily member 4 -1.53166
INSIG2 insulin induced gene 2 -1.53101
DUSP10 dual specificity phosphatase 10 -1.52955
PPP1R3B protein phosphatase 1, regulatory subunit 3B -1.52824
APOL3 apolipoprotein L, 3 -1.5279
SLC15A3 solute carrier family 15 (oligopeptide transporter), member 3 -1.52745
DCDC2B doublecortin domain containing 2B -1.52482
GJB3 gap junction protein, beta 3, 31kDa -1.52315
DKFZP434H168 uncharacterized LOC26077 -1.52267
CCNH cyclin H -1.52172
PRSS3P2 protease, serine, 3 pseudogene 2 -1.51944
PLA1A phospholipase A1 member A -1.5191
CTH cystathionine gamma-lyase -1.51857
MEFV Mediterranean fever -1.51804
ADCY7 adenylate cyclase 7 -1.51584
LAIR1 leukocyte-associated immunoglobulin-like receptor 1 -1.51533
RUNDC1 RUN domain containing 1 -1.51252
NLRX1 NLR family member X1 -1.51004
TAB3 TGF-beta activated kinase 1/MAP3K7 binding protein 3 -1.50963
OR7A5 olfactory receptor, family 7, subfamily A, member 5 -1.50657
LOC100129935 lectin, galactoside-binding, soluble, 14 pseudogene -1.50652
LOC441204 uncharacterized LOC441204 -1.50046
BICD1 bicaudal D homolog 1 (Drosophila) -1.50029
DYSF dysferlin -1.4985
GH2 growth hormone 2 -1.49753
GSX1 GS homeobox 1 -1.49471
PIGX phosphatidylinositol glycan anchor biosynthesis, class X -1.48827
PLEKHG6 pleckstrin homology domain containing, family G (with RhoGef domain) member 6 -1.48749
ICK intestinal cell (MAK-like) kinase -1.48605
LOC100652768 uncharacterized LOC100652768 -1.48538
ERMARD ER membrane-associated RNA degradation -1.48388
ERAP1 endoplasmic reticulum aminopeptidase 1 -1.47777
MEI1 meiosis inhibitor 1 -1.47644
POU5F1P4 POU class 5 homeobox 1 pseudogene 4 -1.47595
ALPI alkaline phosphatase, intestinal -1.47459
HTR3A 5-hydroxytryptamine (serotonin) receptor 3A, ionotropic -1.47408
PURB purine-rich element binding protein B -1.47376
CXORF38 chromosome X open reading frame 38 -1.47109
FURIN furin (paired basic amino acid cleaving enzyme) -1.47009
RIIAD1 regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1 -1.47008
YKT6 YKT6 v-SNARE homolog (S. cerevisiae) -1.46895
TPRG1L tumor protein p63 regulated 1-like -1.46692
KIAA1324 KIAA1324 -1.46494
SH3BP2 SH3-domain binding protein 2 -1.46222
PRODH2 proline dehydrogenase (oxidase) 2 -1.46124
MSLN mesothelin -1.45804
P2RX1 purinergic receptor P2X, ligand gated ion channel, 1 -1.45597
RAPGEF3 Rap guanine nucleotide exchange factor (GEF) 3 -1.45409
MALSU1 mitochondrial assembly of ribosomal large subunit 1 -1.45406
NUPL2 nucleoporin like 2 -1.45212
IGBP1 immunoglobulin (CD79A) binding protein 1 -1.45212
MS4A6E membrane-spanning 4-domains, subfamily A, member 6E -1.45169