SNU423 Gene Set

Dataset CCLE Cell Line Gene Expression Profiles
Category transcriptomics
Type cell line
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Genes

335 genes with high or low expression in SNU423 relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
KRTAP2-2 keratin associated protein 2-2 3.40801
ZCCHC5 zinc finger, CCHC domain containing 5 3.40794
LOC100505727 uncharacterized LOC100505727 3.40647
PPAPDC1A phosphatidic acid phosphatase type 2 domain containing 1A 2.84601
SLC16A2 solute carrier family 16, member 2 (thyroid hormone transporter) 2.786
TAF9B TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa 2.59542
CNN1 calponin 1, basic, smooth muscle 2.5641
PSG1 pregnancy specific beta-1-glycoprotein 1 2.35725
TFE3 transcription factor binding to IGHM enhancer 3 2.33752
ABHD12 abhydrolase domain containing 12 2.31894
KRBOX4 KRAB box domain containing 4 2.26372
HCN4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 2.19033
C15ORF54 chromosome 15 open reading frame 54 2.17282
HLF hepatic leukemia factor 2.14649
PDE10A phosphodiesterase 10A 2.12445
PSG9 pregnancy specific beta-1-glycoprotein 9 2.11141
KISS1 KiSS-1 metastasis-suppressor 2.09725
KIF4A kinesin family member 4A 2.07621
CENPI centromere protein I 2.07536
MOSPD1 motile sperm domain containing 1 2.0641
CDK15 cyclin-dependent kinase 15 2.0459
CUL4B cullin 4B 2.03442
NXT2 nuclear transport factor 2-like export factor 2 2.03127
PGK1 phosphoglycerate kinase 1 2.02695
FAM127B family with sequence similarity 127, member B 2.01253
TRIM55 tripartite motif containing 55 2.00627
NREP neuronal regeneration related protein 1.98544
TRIM58 tripartite motif containing 58 1.98214
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 1.9451
CSTF2 cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa 1.93381
LACTB lactamase, beta 1.92704
PSG3 pregnancy specific beta-1-glycoprotein 3 1.92445
CFAP58 cilia and flagella associated protein 58 1.902
PDZD11 PDZ domain containing 11 1.88895
C1ORF110 chromosome 1 open reading frame 110 1.88705
LAMP2 lysosomal-associated membrane protein 2 1.88274
KLHL4 kelch-like family member 4 1.88029
NEXN-AS1 NEXN antisense RNA 1 1.82548
PSG2 pregnancy specific beta-1-glycoprotein 2 1.81766
SH3BP4 SH3-domain binding protein 4 1.81226
HCCS holocytochrome c synthase 1.80806
RPP30 ribonuclease P/MRP 30kDa subunit 1.77084
ILDR2 immunoglobulin-like domain containing receptor 2 1.75742
MUSK muscle, skeletal, receptor tyrosine kinase 1.75541
LAS1L LAS1-like (S. cerevisiae) 1.75427
DDO D-aspartate oxidase 1.75157
JMJD6 jumonji domain containing 6 1.74995
COX7B2 cytochrome c oxidase subunit VIIb2 1.74916
FZD2 frizzled class receptor 2 1.74071
MIR210HG MIR210 host gene 1.73592
PGM3 phosphoglucomutase 3 1.72988
PBDC1 polysaccharide biosynthesis domain containing 1 1.7288
KRTAP4-8 keratin associated protein 4-8 1.7245
TMEM14C transmembrane protein 14C 1.7183
ARSI arylsulfatase family, member I 1.71391
UBE2A ubiquitin-conjugating enzyme E2A 1.71368
C1GALT1C1 C1GALT1-specific chaperone 1 1.70961
FUT11 fucosyltransferase 11 (alpha (1,3) fucosyltransferase) 1.70748
POTEKP POTE ankyrin domain family, member K, pseudogene 1.68635
MAP7D3 MAP7 domain containing 3 1.68536
PQBP1 polyglutamine binding protein 1 1.68448
CCDC22 coiled-coil domain containing 22 1.67904
NSAP11 nervous system abundant protein 11 1.67844
PIN1P1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1 1.65282
SLC22A4 solute carrier family 22 (organic cation/zwitterion transporter), member 4 1.64907
UBTD1 ubiquitin domain containing 1 1.6412
PCDHGB5 protocadherin gamma subfamily B, 5 1.61823
ROBO4 roundabout, axon guidance receptor, homolog 4 (Drosophila) 1.60978
RWDD2A RWD domain containing 2A 1.60727
WFDC3 WAP four-disulfide core domain 3 1.59955
EIF5A2 eukaryotic translation initiation factor 5A2 1.59865
VGLL2 vestigial-like family member 2 1.59718
PSG11 pregnancy specific beta-1-glycoprotein 11 1.59358
FAM127A family with sequence similarity 127, member A 1.58999
GPKOW G patch domain and KOW motifs 1.57381
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A 1.56812
MEA1 male-enhanced antigen 1 1.56633
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 1.56565
UPRT uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae) 1.56265
MMP24 matrix metallopeptidase 24 (membrane-inserted) 1.56008
TMEM14B transmembrane protein 14B 1.55804
NGF nerve growth factor (beta polypeptide) 1.55703
NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1 1.55605
MYH9 myosin, heavy chain 9, non-muscle 1.55527
XIRP2 xin actin binding repeat containing 2 1.55339
GLIPR1 GLI pathogenesis-related 1 1.55235
SLC18A3 solute carrier family 18 (vesicular acetylcholine transporter), member 3 1.55203
MAGT1 magnesium transporter 1 1.55135
ERCC6L excision repair cross-complementation group 6-like 1.5475
TUBGCP2 tubulin, gamma complex associated protein 2 1.54297
PAX6 paired box 6 1.54056
ORC3 origin recognition complex, subunit 3 1.53876
FRMPD4 FERM and PDZ domain containing 4 1.53514
UQCC1 ubiquinol-cytochrome c reductase complex assembly factor 1 1.53281
SLC9A6 solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6 1.52592
SH3RF2 SH3 domain containing ring finger 2 1.52305
CEP250 centrosomal protein 250kDa 1.52171
UGCG UDP-glucose ceramide glucosyltransferase 1.51928
RWDD1 RWD domain containing 1 1.51885
C11ORF68 chromosome 11 open reading frame 68 1.51372
NLRP10 NLR family, pyrin domain containing 10 1.51335
MRPL18 mitochondrial ribosomal protein L18 1.50613
CPA4 carboxypeptidase A4 1.50522
SYNJ2 synaptojanin 2 1.4914
NMT2 N-myristoyltransferase 2 1.49089
WFS1 Wolfram syndrome 1 (wolframin) 1.49089
GLRX3 glutaredoxin 3 1.48737
NELFE negative elongation factor complex member E 1.48442
CUTA cutA divalent cation tolerance homolog (E. coli) 1.48025
HDAC8 histone deacetylase 8 1.47536
AOX1 aldehyde oxidase 1 1.47242
SIM1 single-minded family bHLH transcription factor 1 1.47095
SFRP1 secreted frizzled-related protein 1 1.46476
SLC25A14 solute carrier family 25 (mitochondrial carrier, brain), member 14 1.46294
DAPK3 death-associated protein kinase 3 1.46146
KIF18A kinesin family member 18A 1.4537
MRPL14 mitochondrial ribosomal protein L14 1.45167
GRIN3B glutamate receptor, ionotropic, N-methyl-D-aspartate 3B 1.44933
CHRDL1 chordin-like 1 1.44573
PLIN2 perilipin 2 1.44333
PRPS1 phosphoribosyl pyrophosphate synthetase 1 1.44262
C5ORF46 chromosome 5 open reading frame 46 1.43315
PSG4 pregnancy specific beta-1-glycoprotein 4 1.42839
FKBP15 FK506 binding protein 15, 133kDa 1.42678
RANGAP1 Ran GTPase activating protein 1 1.42525
ZNF560 zinc finger protein 560 1.4242
CCHCR1 coiled-coil alpha-helical rod protein 1 1.42078
TCEAL4 transcription elongation factor A (SII)-like 4 1.41931
IPMK inositol polyphosphate multikinase 1.41554
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 1.4129
LOC100506895 uncharacterized LOC100506895 1.4113
LOC440028 uncharacterized LOC440028 1.40373
PLA2G4C phospholipase A2, group IVC (cytosolic, calcium-independent) 1.4026
ROS1 ROS proto-oncogene 1 , receptor tyrosine kinase 1.40143
NOG noggin 1.3977
LOC100505942 uncharacterized LOC100505942 1.39698
INGX inhibitor of growth family, X-linked, pseudogene 1.39553
C6ORF99 chromosome 6 open reading frame 99 1.39472
ACTR1A ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) 1.39144
LINC01561 long intergenic non-protein coding RNA 1561 1.3912
DCBLD1 discoidin, CUB and LCCL domain containing 1 1.38586
LOC100507311 uncharacterized LOC100507311 1.38578
PPP2R5D protein phosphatase 2, regulatory subunit B', delta 1.38544
HAUS7 HAUS augmin-like complex, subunit 7 1.38077
PSMD10 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 1.37415
HPRT1 hypoxanthine phosphoribosyltransferase 1 1.37291
PDE1C phosphodiesterase 1C, calmodulin-dependent 70kDa 1.37182
TSPAN4 tetraspanin 4 1.36722
SERTAD4-AS1 SERTAD4 antisense RNA 1 1.36666
SLC2A8 solute carrier family 2 (facilitated glucose transporter), member 8 1.36558
COL13A1 collagen, type XIII, alpha 1 1.364
GDNF glial cell derived neurotrophic factor 1.36229
NPPB natriuretic peptide B 1.35938
PGBD3 piggyBac transposable element derived 3 1.35352
FAM195B family with sequence similarity 195, member B 1.35244
GFRA1 GDNF family receptor alpha 1 1.35071

low expression

Symbol Name Standardized Value
TEX37 testis expressed 37 -3.23702
TREML4 triggering receptor expressed on myeloid cells-like 4 -3.18202
ZNF862 zinc finger protein 862 -3.04224
TP53I13 tumor protein p53 inducible protein 13 -2.72307
AOC4P amine oxidase, copper containing 4, pseudogene -2.71276
CCDC120 coiled-coil domain containing 120 -2.56513
MYLPF myosin light chain, phosphorylatable, fast skeletal muscle -2.53692
SDHAF1 succinate dehydrogenase complex assembly factor 1 -2.52775
C15ORF62 chromosome 15 open reading frame 62 -2.4916
C8ORF58 chromosome 8 open reading frame 58 -2.45353
TRAV36DV7 T cell receptor alpha variable 36/delta variable 7 -2.43515
PCOLCE procollagen C-endopeptidase enhancer -2.42167
MREG melanoregulin -2.36928
OR7C2 olfactory receptor, family 7, subfamily C, member 2 -2.30181
PNKP polynucleotide kinase 3'-phosphatase -2.2972
NEB nebulin -2.22981
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -2.19354
TFF3 trefoil factor 3 (intestinal) -2.16711
MAFG-AS1 MAFG antisense RNA 1 (head to head) -2.15791
ANKRD46 ankyrin repeat domain 46 -2.14993
RSL1D1 ribosomal L1 domain containing 1 -2.14609
LINC00421 long intergenic non-protein coding RNA 421 -2.14197
EPO erythropoietin -2.13658
NELL2 NEL-like 2 (chicken) -2.1322
MMEL1 membrane metallo-endopeptidase-like 1 -2.0729
HTR1A 5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled -2.06491
LOC100507291 uncharacterized LOC100507291 -2.06135
ZPLD1 zona pellucida-like domain containing 1 -2.02567
LOC100507316 -2.01698
TPH1 tryptophan hydroxylase 1 -2.01384
CETN1 centrin, EF-hand protein, 1 -2.00915
MYL1 myosin, light chain 1, alkali; skeletal, fast -2.00394
ATAD3B ATPase family, AAA domain containing 3B -2.00265
CR2 complement component (3d/Epstein Barr virus) receptor 2 -2.00199
DBIL5P2 diazepam binding inhibitor-like 5 pseudogene 2 -1.99789
SLC45A2 solute carrier family 45, member 2 -1.97158
DNAI2 dynein, axonemal, intermediate chain 2 -1.97158
GABRA2 gamma-aminobutyric acid (GABA) A receptor, alpha 2 -1.949
NTN3 netrin 3 -1.94473
ANKRD17 ankyrin repeat domain 17 -1.94413
RNF112 ring finger protein 112 -1.93507
DDHD2 DDHD domain containing 2 -1.93069
ARID1A AT rich interactive domain 1A (SWI-like) -1.92519
PPA2 pyrophosphatase (inorganic) 2 -1.90945
MYO1A myosin IA -1.89981
LINC00284 long intergenic non-protein coding RNA 284 -1.89597
ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 -1.89234
GP1BA glycoprotein Ib (platelet), alpha polypeptide -1.8794
LOC100506207 uncharacterized LOC100506207 -1.87757
EPPIN epididymal peptidase inhibitor -1.87399
C12ORF57 chromosome 12 open reading frame 57 -1.86944
RXFP1 relaxin/insulin-like family peptide receptor 1 -1.86497
SLC46A1 solute carrier family 46 (folate transporter), member 1 -1.86333
MFSD6L major facilitator superfamily domain containing 6-like -1.85452
CCDC57 coiled-coil domain containing 57 -1.84435
AP1AR adaptor-related protein complex 1 associated regulatory protein -1.8378
LOC284294 uncharacterized LOC284294 -1.83657
FASN fatty acid synthase -1.83339
FBXW4P1 F-box and WD repeat domain containing 4 pseudogene 1 -1.82883
KRT38 keratin 38, type I -1.81756
ULK3 unc-51 like kinase 3 -1.8066
C1ORF111 chromosome 1 open reading frame 111 -1.80304
PRX periaxin -1.79059
PGF placental growth factor -1.78702
SIGLECL1 SIGLEC family like 1 -1.78677
HRG histidine-rich glycoprotein -1.78244
RNASE6 ribonuclease, RNase A family, k6 -1.78048
LRRC8B leucine rich repeat containing 8 family, member B -1.77926
FBXO41 F-box protein 41 -1.7726
MYH7B myosin, heavy chain 7B, cardiac muscle, beta -1.76893
LOC100652824 -1.76248
PTGDR prostaglandin D2 receptor (DP) -1.7593
B4GALT3 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3 -1.75268
GSTP1 glutathione S-transferase pi 1 -1.74647
COX19 COX19 cytochrome c oxidase assembly factor -1.74299
KLHL32 kelch-like family member 32 -1.73854
SEMA3G sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G -1.73765
SPOCK2 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 -1.73332
LRRC36 leucine rich repeat containing 36 -1.73188
KLHL8 kelch-like family member 8 -1.723
UGT2B15 UDP glucuronosyltransferase 2 family, polypeptide B15 -1.71224
F10 coagulation factor X -1.71077
SRC SRC proto-oncogene, non-receptor tyrosine kinase -1.70889
AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase -1.70565
KRT76 keratin 76, type II -1.70387
JPH3 junctophilin 3 -1.69489
EPN2 epsin 2 -1.69354
LIX1 Lix1 homolog (chicken) -1.69229
CSN1S2AP casein alpha s2-like A, pseudogene -1.6918
GABRR3 gamma-aminobutyric acid (GABA) A receptor, rho 3 (gene/pseudogene) -1.68729
OR1F1 olfactory receptor, family 1, subfamily F, member 1 -1.68587
BVES-AS1 BVES antisense RNA 1 -1.68573
CHD2 chromodomain helicase DNA binding protein 2 -1.681
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -1.67592
IGHV3-9 immunoglobulin heavy variable 3-9 -1.67005
NUDT16P1 nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1 -1.66909
TKFC triokinase/FMN cyclase -1.66878
SLMO1 slowmo homolog 1 (Drosophila) -1.66314
LUZP4 leucine zipper protein 4 -1.6593
C20ORF166-AS1 C20orf166 antisense RNA 1 -1.65613
C19ORF73 chromosome 19 open reading frame 73 -1.65605
LOC340357 uncharacterized LOC340357 -1.65284
SPRR2G small proline-rich protein 2G -1.65268
FAM81A family with sequence similarity 81, member A -1.64673
N4BP2 NEDD4 binding protein 2 -1.64667
BHLHE23 basic helix-loop-helix family, member e23 -1.64208
MPO myeloperoxidase -1.63858
TM2D1 TM2 domain containing 1 -1.62984
CLYBL citrate lyase beta like -1.62712
CAPN12 calpain 12 -1.6223
C1ORF162 chromosome 1 open reading frame 162 -1.6219
LOC100505564 uncharacterized LOC100505564 -1.62019
PTPN18 protein tyrosine phosphatase, non-receptor type 18 (brain-derived) -1.61166
CDRT15L2 CMT1A duplicated region transcript 15-like 2 -1.61142
ZNF784 zinc finger protein 784 -1.60654
TRAPPC9 trafficking protein particle complex 9 -1.606
LOC100505835 -1.60502
MAP1LC3C microtubule-associated protein 1 light chain 3 gamma -1.60446
ZNF783 zinc finger family member 783 -1.60417
TTC23L tetratricopeptide repeat domain 23-like -1.60209
DICER1-AS1 DICER1 antisense RNA 1 -1.60194
BAG4 BCL2-associated athanogene 4 -1.59899
MTX2 metaxin 2 -1.59783
TSPAN13 tetraspanin 13 -1.5978
DNAAF3 dynein, axonemal, assembly factor 3 -1.59376
LOC100506497 uncharacterized LOC100506497 -1.59334
TMEM163 transmembrane protein 163 -1.59322
TM4SF20 transmembrane 4 L six family member 20 -1.58665
IGLV4-60 immunoglobulin lambda variable 4-60 -1.5837
TMEM229B transmembrane protein 229B -1.57743
PLIN4 perilipin 4 -1.57605
AFF1 AF4/FMR2 family, member 1 -1.57599
CTSK cathepsin K -1.57332
PHOX2B paired-like homeobox 2b -1.57181
RCHY1 ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase -1.56922
SMIM19 small integral membrane protein 19 -1.56632
GRM8 glutamate receptor, metabotropic 8 -1.56226
REG3G regenerating islet-derived 3 gamma -1.55622
TSNARE1 t-SNARE domain containing 1 -1.5547
PIPOX pipecolic acid oxidase -1.55436
ATXN7L2 ataxin 7-like 2 -1.54914
PYY peptide YY -1.54892
SEPW1 selenoprotein W, 1 -1.54768
CRYBA1 crystallin, beta A1 -1.54344
DCT dopachrome tautomerase -1.54172
RETNLB resistin like beta -1.53788
LRFN4 leucine rich repeat and fibronectin type III domain containing 4 -1.53516
TSPAN11 tetraspanin 11 -1.53363
WHSC1L1 Wolf-Hirschhorn syndrome candidate 1-like 1 -1.53201
COX18 COX18 cytochrome c oxidase assembly factor -1.52719
SLC39A12 solute carrier family 39 (zinc transporter), member 12 -1.52062
POLB polymerase (DNA directed), beta -1.51886
LINC00337 long intergenic non-protein coding RNA 337 -1.51374
RAB26 RAB26, member RAS oncogene family -1.51231
PCYOX1L prenylcysteine oxidase 1 like -1.50869
F12 coagulation factor XII (Hageman factor) -1.50809
EXOC3L4 exocyst complex component 3-like 4 -1.50067
SNX22 sorting nexin 22 -1.49615
PRODH2 proline dehydrogenase (oxidase) 2 -1.49603
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 -1.49369
SPP2 secreted phosphoprotein 2, 24kDa -1.49274
USH1C Usher syndrome 1C (autosomal recessive, severe) -1.49083
BCAM basal cell adhesion molecule (Lutheran blood group) -1.48883
SPATA3 spermatogenesis associated 3 -1.48652
TSPAN33 tetraspanin 33 -1.4859
RGS19 regulator of G-protein signaling 19 -1.48529
AK8 adenylate kinase 8 -1.48147
TBCK TBC1 domain containing kinase -1.48067
MST1 macrophage stimulating 1 -1.48028
RNF170 ring finger protein 170 -1.47745
PRPF38B pre-mRNA processing factor 38B -1.47485
AXIN1 axin 1 -1.47254
ERMAP erythroblast membrane-associated protein (Scianna blood group) -1.47208
ITGAX integrin, alpha X (complement component 3 receptor 4 subunit) -1.47055
REEP4 receptor accessory protein 4 -1.46985
ATP1A1-AS1 ATP1A1 antisense RNA 1 -1.46203
NAPG N-ethylmaleimide-sensitive factor attachment protein, gamma -1.46147
USP29 ubiquitin specific peptidase 29 -1.45802
OR11A1 olfactory receptor, family 11, subfamily A, member 1 -1.45287