SNU61 Gene Set

Dataset CCLE Cell Line Gene Expression Profiles
Category transcriptomics
Type cell line
Description cell line derived from large intestine (Cancer Cell Line Encyclopedia)
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Genes

306 genes with high or low expression in SNU61 relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
NXPE1 neurexophilin and PC-esterase domain family, member 1 3.40801
SPDYA speedy/RINGO cell cycle regulator family member A 3.4079
SIRAL1 SIR2 antiphage like 1 2.29932
LINC00543 long intergenic non-protein coding RNA 543 2.27032
CASP5 caspase 5, apoptosis-related cysteine peptidase 2.2573
CHP2 calcineurin-like EF-hand protein 2 2.25279
CHST5 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 2.25277
UMPS uridine monophosphate synthetase 2.16193
SLC17A4 solute carrier family 17, member 4 2.10611
GSKIP GSK3B interacting protein 2.08896
CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2.07712
ABHD12B abhydrolase domain containing 12B 2.05632
BCO1 beta-carotene oxygenase 1 2.04829
SQLE squalene epoxidase 2.0449
MUC13 mucin 13, cell surface associated 2.03153
B3GALT5 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5 2.01297
HOXA13 homeobox A13 2.00817
PCSK7 proprotein convertase subtilisin/kexin type 7 1.99487
HOTTIP HOXA distal transcript antisense RNA 1.97357
FFAR4 free fatty acid receptor 4 1.95468
MUC3A mucin 3A, cell surface associated 1.87732
BCL2L14 BCL2-like 14 (apoptosis facilitator) 1.85932
FCAMR Fc receptor, IgA, IgM, high affinity 1.84843
NOX1 NADPH oxidase 1 1.8355
FUT4 fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific) 1.82479
POF1B premature ovarian failure, 1B 1.81248
SIAE sialic acid acetylesterase 1.80598
HOXA11-AS HOXA11 antisense RNA 1.80302
PSMB1 proteasome (prosome, macropain) subunit, beta type, 1 1.80244
CYP2B6 cytochrome P450, family 2, subfamily B, polypeptide 6 1.79838
ACVRL1 activin A receptor type II-like 1 1.77108
C9ORF69 chromosome 9 open reading frame 69 1.77038
ATOH1 atonal homolog 1 (Drosophila) 1.77037
TOMM70A translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) 1.7668
C8ORF76 chromosome 8 open reading frame 76 1.75833
DERL1 derlin 1 1.75557
BTNL8 butyrophilin-like 8 1.75245
SFT2D1 SFT2 domain containing 1 1.75079
APRT adenine phosphoribosyltransferase 1.74715
GSX1 GS homeobox 1 1.74144
NELFCD negative elongation factor complex member C/D 1.73744
LINC00483 long intergenic non-protein coding RNA 483 1.73003
PCBD2 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 1.72609
TMEM141 transmembrane protein 141 1.71291
UGT1A8 UDP glucuronosyltransferase 1 family, polypeptide A8 1.70839
GPA33 glycoprotein A33 (transmembrane) 1.70036
QTRTD1 queuine tRNA-ribosyltransferase domain containing 1 1.69812
TRIM31 tripartite motif containing 31 1.69703
KIAA0196 KIAA0196 1.6919
HHLA2 HERV-H LTR-associating 2 1.6874
AVL9 AVL9 homolog (S. cerevisiase) 1.68554
MUC17 mucin 17, cell surface associated 1.67575
WDYHV1 WDYHV motif containing 1 1.66984
SRSF8 serine/arginine-rich splicing factor 8 1.66802
PLEKHA6 pleckstrin homology domain containing, family A member 6 1.65289
GAN gigaxonin 1.64621
GCNT3 glucosaminyl (N-acetyl) transferase 3, mucin type 1.64197
PUS1 pseudouridylate synthase 1 1.6417
HSD11B2 hydroxysteroid (11-beta) dehydrogenase 2 1.62759
NDUFA10 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa 1.62249
FBXO34 F-box protein 34 1.62143
PTGDR prostaglandin D2 receptor (DP) 1.62137
LOC90246 uncharacterized LOC90246 1.61782
RNF139 ring finger protein 139 1.61745
CDX2 caudal type homeobox 2 1.61051
CDX1 caudal type homeobox 1 1.59194
POU2F3 POU class 2 homeobox 3 1.59164
HAAO 3-hydroxyanthranilate 3,4-dioxygenase 1.59074
PGP phosphoglycolate phosphatase 1.58866
HTR1B 5-hydroxytryptamine (serotonin) receptor 1B, G protein-coupled 1.58418
CLCA1 chloride channel accessory 1 1.57816
ABCC13 ATP-binding cassette, sub-family C (CFTR/MRP), member 13, pseudogene 1.57705
ZW10 zw10 kinetochore protein 1.57482
MUC12 mucin 12, cell surface associated 1.57337
NDUFB9 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa 1.57196
MYO1A myosin IA 1.56508
ST14 suppression of tumorigenicity 14 (colon carcinoma) 1.5647
LRRC19 leucine rich repeat containing 19 1.55853
LRRC66 leucine rich repeat containing 66 1.55818
FGFR1OP FGFR1 oncogene partner 1.55391
PPP1R14D protein phosphatase 1, regulatory (inhibitor) subunit 14D 1.55271
ASL argininosuccinate lyase 1.53314
DLG3 discs, large homolog 3 (Drosophila) 1.53078
RNF186 ring finger protein 186 1.52396
PCYT2 phosphate cytidylyltransferase 2, ethanolamine 1.52264
PPP2R5A protein phosphatase 2, regulatory subunit B', alpha 1.52164
NOP9 NOP9 nucleolar protein 1.52135
GUCY2C guanylate cyclase 2C 1.51963
HOXC11 homeobox C11 1.51868
SLC9A8 solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 1.51565
GK5 glycerol kinase 5 (putative) 1.51364
DARS2 aspartyl-tRNA synthetase 2, mitochondrial 1.50741
CCNK cyclin K 1.50683
FAM162A family with sequence similarity 162, member A 1.50435
CCDC83 coiled-coil domain containing 83 1.50364
ATG3 autophagy related 3 1.49588
COA3 cytochrome c oxidase assembly factor 3 1.49569
HEPH hephaestin 1.49252
MAOA monoamine oxidase A 1.49156
NUDT16P1 nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1 1.48637
AIMP2 aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 1.48183
HEBP2 heme binding protein 2 1.48163
TM4SF20 transmembrane 4 L six family member 20 1.47758
APOBEC1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 1.47723
FLJ22763 uncharacterized LOC401081 1.47569
FAM49B family with sequence similarity 49, member B 1.4734
PRR15 proline rich 15 1.46782
CNGA1 cyclic nucleotide gated channel alpha 1 1.46228
TSPAN15 tetraspanin 15 1.46184
CLRN3 clarin 3 1.45485
ACTL8 actin-like 8 1.45318
TM9SF3 transmembrane 9 superfamily member 3 1.45098
NWD2 NACHT and WD repeat domain containing 2 1.45097
ISG20L2 interferon stimulated exonuclease gene 20kDa-like 2 1.44062
MEP1A meprin A, alpha (PABA peptide hydrolase) 1.43828
CA1 carbonic anhydrase I 1.43529
PLS1 plastin 1 1.43389
C10ORF99 chromosome 10 open reading frame 99 1.43164
SAMD5 sterile alpha motif domain containing 5 1.4286
TRAPPC2L trafficking protein particle complex 2-like 1.42854
IFT172 intraflagellar transport 172 1.42555
AKAP1 A kinase (PRKA) anchor protein 1 1.42397
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 1.42231
MAP7 microtubule-associated protein 7 1.42217
ACAT2 acetyl-CoA acetyltransferase 2 1.41263
FAM120A family with sequence similarity 120A 1.41256
PIWIL4 piwi-like RNA-mediated gene silencing 4 1.41244
KLHDC4 kelch domain containing 4 1.40924
C2ORF72 chromosome 2 open reading frame 72 1.40495
TMEM126B transmembrane protein 126B 1.40454
LAD1 ladinin 1 1.4032
DECR2 2,4-dienoyl CoA reductase 2, peroxisomal 1.40108
SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 1.40001
LSS lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) 1.39972
ISX intestine-specific homeobox 1.39862
HUS1 HUS1 checkpoint homolog (S. pombe) 1.39769
SP6 Sp6 transcription factor 1.3971
CCDC85C coiled-coil domain containing 85C 1.39399
TMEM171 transmembrane protein 171 1.39292
ARHGAP32 Rho GTPase activating protein 32 1.38974
KRTAP4-1 keratin associated protein 4-1 1.38921
WFDC6 WAP four-disulfide core domain 6 1.38863
IL33 interleukin 33 1.38825
SLCO2B1 solute carrier organic anion transporter family, member 2B1 1.38389
MVD mevalonate (diphospho) decarboxylase 1.37857
C9ORF156 chromosome 9 open reading frame 156 1.37515
TRMT12 tRNA methyltransferase 12 homolog (S. cerevisiae) 1.37397
TRIM14 tripartite motif containing 14 1.37306
MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 1.37295
NAT2 N-acetyltransferase 2 (arylamine N-acetyltransferase) 1.37176
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase 1.37085
HMBS hydroxymethylbilane synthase 1.36989
CEP170B centrosomal protein 170B 1.36976
SMG7 SMG7 nonsense mediated mRNA decay factor 1.36815
DOLPP1 dolichyldiphosphatase 1 1.36664
PLBD1 phospholipase B domain containing 1 1.36626
PSORS1C2 psoriasis susceptibility 1 candidate 2 1.36622
CAPN5 calpain 5 1.36507
RASL11A RAS-like, family 11, member A 1.3644
ARAF A-Raf proto-oncogene, serine/threonine kinase 1.36426
SGPP2 sphingosine-1-phosphate phosphatase 2 1.36313
REG4 regenerating islet-derived family, member 4 1.36164
NRARP NOTCH-regulated ankyrin repeat protein 1.35956
LGALS2 lectin, galactoside-binding, soluble, 2 1.35704
TBRG4 transforming growth factor beta regulator 4 1.35689
METTL13 methyltransferase like 13 1.35521
ADH6 alcohol dehydrogenase 6 (class V) 1.35458
METTL7B methyltransferase like 7B 1.35417
RNPEP arginyl aminopeptidase (aminopeptidase B) 1.35387
AFG3L2 AFG3-like AAA ATPase 2 1.35046
FUT2 fucosyltransferase 2 (secretor status included) 1.34963
EARS2 glutamyl-tRNA synthetase 2, mitochondrial 1.34951
IBA57 IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae) 1.34744
CFAP47 cilia and flagella associated protein 47 0.122207

low expression

Symbol Name Standardized Value
ALG10B ALG10B, alpha-1,2-glucosyltransferase -3.45633
ZNF512B zinc finger protein 512B -2.58104
FAM71F2 family with sequence similarity 71, member F2 -2.44077
ANGPTL3 angiopoietin-like 3 -2.40556
COL1A2 collagen, type I, alpha 2 -2.39562
ZNF260 zinc finger protein 260 -2.39327
IFNA16 interferon, alpha 16 -2.32691
PHF2P1 PHD finger protein 2 pseudogene 1 -2.31905
FAM229B family with sequence similarity 229, member B -2.30569
NKIRAS1 NFKB inhibitor interacting Ras-like 1 -2.28685
LINC00305 long intergenic non-protein coding RNA 305 -2.257
CHD6 chromodomain helicase DNA binding protein 6 -2.24868
RB1CC1 RB1-inducible coiled-coil 1 -2.22115
SRP19 signal recognition particle 19kDa -2.21284
POLI polymerase (DNA directed) iota -2.21008
PRRC1 proline-rich coiled-coil 1 -2.19019
PRMT2 protein arginine methyltransferase 2 -2.17626
EID2B EP300 interacting inhibitor of differentiation 2B -2.12642
ATG12 autophagy related 12 -2.11531
TTBK2 tau tubulin kinase 2 -2.09768
TDRP testis development related protein -2.09741
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 -2.09483
MTMR9 myotubularin related protein 9 -2.07122
CYP4X1 cytochrome P450, family 4, subfamily X, polypeptide 1 -2.06749
LOC339975 uncharacterized LOC339975 -2.06634
SOX18 SRY (sex determining region Y)-box 18 -2.04866
SLC22A24 solute carrier family 22, member 24 -2.03992
SLC25A53 solute carrier family 25, member 53 -2.03456
FBXO15 F-box protein 15 -2.03095
APLF aprataxin and PNKP like factor -2.00922
CEP120 centrosomal protein 120kDa -1.97252
SLC35B4 solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4 -1.9723
GNL1 guanine nucleotide binding protein-like 1 -1.95749
WDR19 WD repeat domain 19 -1.94543
NGB neuroglobin -1.94422
ZNF337 zinc finger protein 337 -1.93807
ARSK arylsulfatase family, member K -1.91843
PIK3C3 phosphatidylinositol 3-kinase, catalytic subunit type 3 -1.91785
PCGEM1 PCGEM1, prostate-specific transcript (non-protein coding) -1.91715
NAT14 N-acetyltransferase 14 (GCN5-related, putative) -1.91486
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -1.91154
ZNF599 zinc finger protein 599 -1.88048
DMXL1 Dmx-like 1 -1.87796
SNORD114-3 small nucleolar RNA, C/D box 114-3 -1.8728
LIN37 lin-37 DREAM MuvB core complex component -1.83825
CETN3 centrin, EF-hand protein, 3 -1.83036
EID2 EP300 interacting inhibitor of differentiation 2 -1.82361
CYP1B1-AS1 CYP1B1 antisense RNA 1 -1.8126
PROSER3 proline and serine rich 3 -1.79707
DCD dermcidin -1.79597
RERGL RERG/RAS-like -1.7908
LZTR1 leucine-zipper-like transcription regulator 1 -1.78883
MYL6B myosin, light chain 6B, alkali, smooth muscle and non-muscle -1.78785
RBPJL recombination signal binding protein for immunoglobulin kappa J region-like -1.78736
BBS9 Bardet-Biedl syndrome 9 -1.77585
ZDHHC15 zinc finger, DHHC-type containing 15 -1.76747
KCTD17 potassium channel tetramerization domain containing 17 -1.76179
VPS37A vacuolar protein sorting 37 homolog A (S. cerevisiae) -1.76093
KRT78 keratin 78, type II -1.75613
LYSMD3 LysM, putative peptidoglycan-binding, domain containing 3 -1.7556
CTRC chymotrypsin C (caldecrin) -1.75271
PPP3CC protein phosphatase 3, catalytic subunit, gamma isozyme -1.75111
P3H1 prolyl 3-hydroxylase 1 -1.74784
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -1.74471
CCNH cyclin H -1.73055
HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 -1.70738
KIAA2022 KIAA2022 -1.70387
DCP2 decapping mRNA 2 -1.69636
EBF3 early B-cell factor 3 -1.67636
SEMA4F sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F -1.66807
FAM218A family with sequence similarity 218, member A -1.66559
RFESD Rieske (Fe-S) domain containing -1.66516
RGS12 regulator of G-protein signaling 12 -1.66149
RIOK2 RIO kinase 2 -1.65436
APBA3 amyloid beta (A4) precursor protein-binding, family A, member 3 -1.65005
TTC37 tetratricopeptide repeat domain 37 -1.63808
GZMA granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3) -1.63741
FAN1 FANCD2/FANCI-associated nuclease 1 -1.62767
SENP7 SUMO1/sentrin specific peptidase 7 -1.6258
FAM172A family with sequence similarity 172, member A -1.62274
OR2J2 olfactory receptor, family 2, subfamily J, member 2 -1.62028
APPL1 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 -1.60809
FAM107A family with sequence similarity 107, member A -1.60585
ZNF71 zinc finger protein 71 -1.59309
MYBL1 v-myb avian myeloblastosis viral oncogene homolog-like 1 -1.58888
PPIP5K2 diphosphoinositol pentakisphosphate kinase 2 -1.58818
CEP19 centrosomal protein 19kDa -1.58549
DDHD2 DDHD domain containing 2 -1.58255
JARID2 jumonji, AT rich interactive domain 2 -1.57671
ZPLD1 zona pellucida-like domain containing 1 -1.5743
ELOVL5 ELOVL fatty acid elongase 5 -1.56001
PCDHB16 protocadherin beta 16 -1.55971
PGBD1 piggyBac transposable element derived 1 -1.55299
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase -1.55165
AACSP1 acetoacetyl-CoA synthetase pseudogene 1 -1.55063
RAB29 RAB29, member RAS oncogene family -1.54618
APC adenomatous polyposis coli -1.54617
PLAC9 placenta-specific 9 -1.54174
GPR155 G protein-coupled receptor 155 -1.53692
SNX2 sorting nexin 2 -1.53647
CCDC88A coiled-coil domain containing 88A -1.53536
GIN1 gypsy retrotransposon integrase 1 -1.5348
KIAA0754 KIAA0754 -1.52892
C19ORF12 chromosome 19 open reading frame 12 -1.52703
WISP3 WNT1 inducible signaling pathway protein 3 -1.52523
OLFM3 olfactomedin 3 -1.52388
ZNF586 zinc finger protein 586 -1.5216
IGLL1 immunoglobulin lambda-like polypeptide 1 -1.52144
LINC00515 long intergenic non-protein coding RNA 515 -1.5193
PCM1 pericentriolar material 1 -1.50618
C17ORF51 chromosome 17 open reading frame 51 -1.50541
SNX16 sorting nexin 16 -1.50509
TP53INP1 tumor protein p53 inducible nuclear protein 1 -1.50328
JPH4 junctophilin 4 -1.50191
IER3IP1 immediate early response 3 interacting protein 1 -1.50057
PHF20 PHD finger protein 20 -1.49919
YTHDC2 YTH domain containing 2 -1.499
LOC100505498 uncharacterized LOC100505498 -1.49135
GRK4 G protein-coupled receptor kinase 4 -1.49131
HTR7 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled -1.49044
SYCE2 synaptonemal complex central element protein 2 -1.48662
PHAX phosphorylated adaptor for RNA export -1.48633
HEXA hexosaminidase A (alpha polypeptide) -1.48507
TCEB1 transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) -1.48052
PCDHB6 protocadherin beta 6 -1.47952
GABRA5 gamma-aminobutyric acid (GABA) A receptor, alpha 5 -1.47886
CAPN14 calpain 14 -1.47413
LOC100506548 uncharacterized LOC100506548 -1.46826
NTNG2 netrin G2 -1.46535
PRSS55 protease, serine, 55 -1.45992
PPP1R12C protein phosphatase 1, regulatory subunit 12C -1.45458
RRM2B ribonucleotide reductase M2 B (TP53 inducible) -1.45447