SOX9 Gene Set

Dataset JASPAR Predicted Transcription Factor Targets
Category genomics
Type transcription factor
Description SRY (sex determining region Y)-box 9|The protein encoded by this gene recognizes the sequence CCTTGAG along with other members of the HMG-box class DNA-binding proteins. It acts during chondrocyte differentiation and, with steroidogenic factor 1, regulates transcription of the anti-Muellerian hormone (AMH) gene. Deficiencies lead to the skeletal malformation syndrome campomelic dysplasia, frequently with sex reversal. [provided by RefSeq, Jul 2008] (NCBI Entrez Gene Database, 6662)
External Link http://www.ncbi.nlm.nih.gov/gene/6662
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Genes

102 target genes of the SOX9 transcription factor predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.

Symbol Name
ADM adrenomedullin
ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A
ATP6V1G2-DDX39B ATP6V1G2-DDX39B readthrough (NMD candidate)
AVPR1A arginine vasopressin receptor 1A
BRD2 bromodomain containing 2
C10ORF53 chromosome 10 open reading frame 53
C6ORF163 chromosome 6 open reading frame 163
CCDC178 coiled-coil domain containing 178
CDR1 cerebellar degeneration-related protein 1, 34kDa
CLCN3 chloride channel, voltage-sensitive 3
CLDN2 claudin 2
COL15A1 collagen, type XV, alpha 1
CSTL1 cystatin-like 1
CTDNEP1 CTD nuclear envelope phosphatase 1
CYP21A2 cytochrome P450, family 21, subfamily A, polypeptide 2
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
DIO2 deiodinase, iodothyronine, type II
EHMT2 euchromatic histone-lysine N-methyltransferase 2
EIF2B5 eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa
ESPN espin
FAAH2 fatty acid amide hydrolase 2
FAM101B family with sequence similarity 101, member B
FAM21A family with sequence similarity 21, member A
FASTKD2 FAST kinase domains 2
FBXO22-AS1 FBXO22 antisense RNA 1
FBXW11 F-box and WD repeat domain containing 11
FCGR1B Fc fragment of IgG, high affinity Ib, receptor (CD64)
FLOT1 flotillin 1
FUT10 fucosyltransferase 10 (alpha (1,3) fucosyltransferase)
GIMAP6 GTPase, IMAP family member 6
GNL1 guanine nucleotide binding protein-like 1
GPHRB golgi pH regulator B
GTPBP6 GTP binding protein 6 (putative)
HCG26 HLA complex group 26 (non-protein coding)
HCP5 HLA complex P5 (non-protein coding)
HLA-E major histocompatibility complex, class I, E
ISL1 ISL LIM homeobox 1
KCNIP4-IT1 KCNIP4 intronic transcript 1
KLHL41 kelch-like family member 41
LCE2A late cornified envelope 2A
LCMT2 leucine carboxyl methyltransferase 2
LHCGR luteinizing hormone/choriogonadotropin receptor
LIMS1 LIM and senescent cell antigen-like domains 1
LINC00685 long intergenic non-protein coding RNA 685
LOC401242 uncharacterized LOC401242
LRRC7 leucine rich repeat containing 7
LSM2 LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
MATR3 matrin 3
MECOM MDS1 and EVI1 complex locus
MEF2A myocyte enhancer factor 2A
MFSD11 major facilitator superfamily domain containing 11
MILR1 mast cell immunoglobulin-like receptor 1
MIPOL1 mirror-image polydactyly 1
MIR3648-1 microRNA 3648-1
MIR3687-1 microRNA 3687-1
MIR4280 microRNA 4280
MIR889 microRNA 889
MSMB microseminoprotein, beta-
NBPF14 neuroblastoma breakpoint family, member 14
NEU1 sialidase 1 (lysosomal sialidase)
OR2AG2 olfactory receptor, family 2, subfamily AG, member 2
OR51T1 olfactory receptor, family 51, subfamily T, member 1
OR5D13 olfactory receptor, family 5, subfamily D, member 13 (gene/pseudogene)
OR6C70 olfactory receptor, family 6, subfamily C, member 70
P3H2 prolyl 3-hydroxylase 2
PAPL iron/zinc purple acid phosphatase-like protein
PATL2 protein associated with topoisomerase II homolog 2 (yeast)
POMGNT2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-)
PPP2R2B protein phosphatase 2, regulatory subunit B, beta
PRRC2A proline-rich coiled-coil 2A
PSMC4 proteasome (prosome, macropain) 26S subunit, ATPase, 4
PTCHD4 patched domain containing 4
REXO1L1P REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1, pseudogene
REXO1L2P REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 2, pseudogene
RNF138P1 ring finger protein 138, E3 ubiquitin protein ligase pseudogene 1
RNF39 ring finger protein 39
SCAP SREBF chaperone
SH3GL3 SH3-domain GRB2-like 3
SLC25A26 solute carrier family 25 (S-adenosylmethionine carrier), member 26
SLC35E4 solute carrier family 35, member E4
SNHG4 small nucleolar RNA host gene 4
SNORD78 small nucleolar RNA, C/D box 78
SPANXA2-OT1 SPANXA2 overlapping transcript 1
TCEANC2 transcription elongation factor A (SII) N-terminal and central domain containing 2
TCF19 transcription factor 19
TDRP testis development related protein
TFCP2L1 transcription factor CP2-like 1
TNF tumor necrosis factor
TNXB tenascin XB
TRIM26 tripartite motif containing 26
TRIM40 tripartite motif containing 40
TTC1 tetratricopeptide repeat domain 1
TTC4 tetratricopeptide repeat domain 4
TUSC5 tumor suppressor candidate 5
UBN1 ubinuclein 1
UIMC1 ubiquitin interaction motif containing 1
USH2A Usher syndrome 2A (autosomal recessive, mild)
VARS valyl-tRNA synthetase
WASF2 WAS protein family, member 2
ZBP1 Z-DNA binding protein 1
ZCCHC17 zinc finger, CCHC domain containing 17
ZFP57 ZFP57 zinc finger protein