SP140 Gene Set

Dataset CM4AI KOLF21J CRISPRi Gene Perturbation Atlas
Category transcriptomics
Type gene perturbation
Description SP140 nuclear body protein| (NCBI Entrez Gene Database, 11262)
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Genes

331 genes differentially expressed following the SP140 gene perturbation from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas.

increased expression

Symbol Name Standardized Value
ACOT4 acyl-CoA thioesterase 4 3.46128
PCDHB1 protocadherin beta 1 3.46128
SSTR1 somatostatin receptor 1 3.46128
DPEP2 dipeptidase 2 3.46128
PNMA5 paraneoplastic Ma antigen family member 5 3.46128
TNFSF15 tumor necrosis factor (ligand) superfamily, member 15 3.46128
OR10A5 olfactory receptor, family 10, subfamily A, member 5 3.46128
CYP4A11 cytochrome P450, family 4, subfamily A, polypeptide 11 3.46128
FETUB fetuin B 3.46128
NDST4 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4 3.46128
DNASE1L3 deoxyribonuclease I-like 3 3.46128
CD14 CD14 molecule 3.46128
RGS9BP regulator of G protein signaling 9 binding protein 3.46128
SYCP2 synaptonemal complex protein 2 3.46128
NRN1 neuritin 1 3.46128
SRPX2 sushi-repeat containing protein, X-linked 2 3.46128
SIX1 SIX homeobox 1 3.46128
INHBB inhibin, beta B 3.46128
TNFRSF13B tumor necrosis factor receptor superfamily, member 13B 3.46128
AKAP14 A kinase (PRKA) anchor protein 14 3.46128
GDNF glial cell derived neurotrophic factor 3.46128
ADH1B alcohol dehydrogenase 1B (class I), beta polypeptide 3.46128
CIITA class II, major histocompatibility complex, transactivator 3.46128
TMC3 transmembrane channel-like 3 3.46128
ETV7 ets variant 7 3.46128
SPACA5 sperm acrosome associated 5 3.46128
ITIH6 inter-alpha-trypsin inhibitor heavy chain family, member 6 3.46128
SLC22A7 solute carrier family 22 (organic anion transporter), member 7 3.46128
SLC22A6 solute carrier family 22 (organic anion transporter), member 6 3.46128
SPAG8 sperm associated antigen 8 3.46128
KRTAP5-7 keratin associated protein 5-7 3.46128
ASGR2 asialoglycoprotein receptor 2 3.46128
IL2RG interleukin 2 receptor, gamma 3.46128
NUDT18 nudix (nucleoside diphosphate linked moiety X)-type motif 18 3.46128
ASPA aspartoacylase 3.46128
MFAP5 microfibrillar associated protein 5 3.46128
GPR22 G protein-coupled receptor 22 3.46128
OR12D2 olfactory receptor, family 12, subfamily D, member 2 (gene/pseudogene) 3.46128
TPSD1 tryptase delta 1 3.46128
C3ORF22 chromosome 3 open reading frame 22 3.46128
OCSTAMP osteoclast stimulatory transmembrane protein 3.46128
CX3CR1 chemokine (C-X3-C motif) receptor 1 3.46128
CLCF1 cardiotrophin-like cytokine factor 1 3.46128
ADAMTSL4-AS2 ADAMTSL4 antisense RNA 2 3.46128
STING1 stimulator of interferon response cGAMP interactor 1 3.46128
OR10H5 olfactory receptor, family 10, subfamily H, member 5 3.46128
ROPN1B rhophilin associated tail protein 1B 3.46128
CD300LF CD300 molecule-like family member f 3.46128
PNLIPRP2 pancreatic lipase-related protein 2 3.46128
ACER1 alkaline ceramidase 1 3.46128
TMIGD1 transmembrane and immunoglobulin domain containing 1 3.46128
SRGN serglycin 3.46128
GUCY1A1 guanylate cyclase 1 soluble subunit alpha 1 3.46128
TCIM transcriptional and immune response regulator 3.46128
NSG2 neuronal vesicle trafficking associated 2 3.46128
NHERF4 NHERF family PDZ scaffold protein 4 3.46128
SPMIP3 sperm microtubule inner protein 3 3.46128
TMEM238L transmembrane protein 238 like 3.46128
PEAK3 PEAK family member 3 3.46128
H2AC1 H2A clustered histone 1 3.46128
H2BC3 H2B clustered histone 3 3.46128
AJM1 apical junction component 1 homolog 3.46128
CALHM5 calcium homeostasis modulator family member 5 3.46128
TBC1D3B TBC1 domain family, member 3B 3.46128
OR6F1 olfactory receptor, family 6, subfamily F, member 1 3.46128
ADRB1 adrenoceptor beta 1 3.46128
PRR4 proline rich 4 (lacrimal) 3.46128
LOC124906892 uncharacterized LOC124906892 3.46128
PDE1B phosphodiesterase 1B, calmodulin-dependent 3.46128
TLR1 toll-like receptor 1 3.46128
IL6 interleukin 6 3.46128
HPR haptoglobin-related protein 3.46128
KLHL33 kelch-like family member 33 3.46128
NKX2-5 NK2 homeobox 5 3.46128
PLB1 phospholipase B1 3.46128
SAA1 serum amyloid A1 3.46128
ACE2 angiotensin I converting enzyme 2 3.46128
PROZ protein Z, vitamin K-dependent plasma glycoprotein 3.46128
RDH8 retinol dehydrogenase 8 (all-trans) 3.46128
TSPAN1 tetraspanin 1 3.46128
OR51M1 olfactory receptor, family 51, subfamily M, member 1 3.46128
IMPG1 interphotoreceptor matrix proteoglycan 1 3.46128
ARMCX5-GPRASP2 ARMCX5-GPRASP2 readthrough 3.46128
MROH5 maestro heat-like repeat family member 5 3.46128
DYNAP dynactin associated protein 3.46128
RAB44 RAB44, member RAS oncogene family 3.46128
COMP cartilage oligomeric matrix protein 3.46128
PRSS37 protease, serine, 37 3.46128
SHOX2 short stature homeobox 2 3.46128
TMEM132D transmembrane protein 132D 3.46128
CTSG cathepsin G 3.46128
STAB1 stabilin 1 3.46128
CALHM1 calcium homeostasis modulator 1 3.46128
PMP2 peripheral myelin protein 2 3.46128
ESAM endothelial cell adhesion molecule 3.46128
ERMN ermin, ERM-like protein 3.46128
CYBB cytochrome b-245, beta polypeptide 3.46128
HSF1 heat shock transcription factor 1 3.46128
FZD1 frizzled class receptor 1 3.46128
PRRX1 paired related homeobox 1 3.46128
ABCA10 ATP-binding cassette, sub-family A (ABC1), member 10 3.46128
SCN3A sodium channel, voltage gated, type III alpha subunit 3.46128
IBSP integrin-binding sialoprotein 3.46128
MR1 major histocompatibility complex, class I-related 3.46128
CNTF ciliary neurotrophic factor 3.46128
CCL15 chemokine (C-C motif) ligand 15 3.46128
LOC102723971 beta-lactoglobulin-like 3.46128
HOPX HOP homeobox 3.46128
RELN reelin 3.46128
PRR35 proline rich 35 3.46128
TH tyrosine hydroxylase 3.46128
POU2AF1 POU class 2 associating factor 1 3.46128
ALDH3B1 aldehyde dehydrogenase 3 family, member B1 3.46128
CD244 CD244 molecule, natural killer cell receptor 2B4 3.46128
SPINK9 serine peptidase inhibitor, Kazal type 9 3.46128
NPFFR1 neuropeptide FF receptor 1 3.46128
SIGLEC15 sialic acid binding Ig-like lectin 15 3.46128
OLFML1 olfactomedin-like 1 3.46128
TP63 tumor protein p63 3.46128
VAV1 vav 1 guanine nucleotide exchange factor 3.46128
DLX6 distal-less homeobox 6 3.46128
LYPD5 LY6/PLAUR domain containing 5 3.46128
SH2D1A SH2 domain containing 1A 3.46128
FCAR Fc fragment of IgA receptor 3.46128
LRRN4 leucine rich repeat neuronal 4 3.46128
SAGE1 sarcoma antigen 1 3.46128
IL17B interleukin 17B 3.46128
CLEC18A C-type lectin domain family 18, member A 3.46128
ANGPTL3 angiopoietin-like 3 3.46128
ICAM4 intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) 3.46128
ST18 suppression of tumorigenicity 18, zinc finger 3.46128
ADRA1B adrenoceptor alpha 1B 3.46128
NPAS4 neuronal PAS domain protein 4 3.46128
TRAF3IP3 TRAF3 interacting protein 3 3.46128
ASCL5 achaete-scute family bHLH transcription factor 5 3.46128
ABRA actin binding Rho activating protein 3.46128
LRRC31 leucine rich repeat containing 31 3.46128
DHRS9 dehydrogenase/reductase (SDR family) member 9 3.46128
SOST sclerostin 3.46128
SPINK6 serine peptidase inhibitor, Kazal type 6 3.46128
FUT3 fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group) 3.46128
CYP2D6 cytochrome P450, family 2, subfamily D, polypeptide 6 3.46128
C1ORF105 chromosome 1 open reading frame 105 3.46128
RIIAD1 regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1 3.46128
CIB4 calcium and integrin binding family member 4 3.46128
SULT1C2 sulfotransferase family, cytosolic, 1C, member 2 3.46128
SETBP1 SET binding protein 1 3.46128
AQP1 aquaporin 1 (Colton blood group) 3.46128
LRRC74A leucine rich repeat containing 74A 3.46128
CD52 CD52 molecule 3.42192
EBF4 early B-cell factor 4 3.42192
GMNC geminin coiled-coil domain containing 3.42192
OR6A2 olfactory receptor, family 6, subfamily A, member 2 3.42192
PPM1B protein phosphatase, Mg2+/Mn2+ dependent, 1B 3.31414
NTNG2 netrin G2 3.12856
DUSP10 dual specificity phosphatase 10 3.03522
NLRP2 NLR family, pyrin domain containing 2 2.82223
HEATR4 HEAT repeat containing 4 2.79046
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 2.75888
TTC1 tetratricopeptide repeat domain 1 2.70238
MX1 MX dynamin-like GTPase 1 2.6622
CPSF2 cleavage and polyadenylation specific factor 2, 100kDa 2.64841
FKBP9 FK506 binding protein 9, 63 kDa 2.58439
VBP1 von Hippel-Lindau binding protein 1 2.54421
LYPD6B LY6/PLAUR domain containing 6B 2.52439
LIPH lipase, member H 2.52055
CRHR1 corticotropin releasing hormone receptor 1 2.52055
CORO6 coronin 6 2.52055
TSNAXIP1 translin-associated factor X interacting protein 1 2.52055
FADS6 fatty acid desaturase 6 2.52055
F7 coagulation factor VII (serum prothrombin conversion accelerator) 2.52055
TUBB2B tubulin, beta 2B class IIb 2.50165
SDR42E2 short chain dehydrogenase/reductase family 42E, member 2 2.49476
PCDHGA1 protocadherin gamma subfamily A, 1 2.44576
MYL10 myosin, light chain 10, regulatory 2.40264
MYOT myotilin 2.40264
NMI N-myc (and STAT) interactor 2.39231
SMIM38 small integral membrane protein 38 2.39231
IP6K3 inositol hexakisphosphate kinase 3 2.37546
PTN pleiotrophin 2.37546
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 2.36904
SOD2 superoxide dismutase 2, mitochondrial 2.36815
TMEM70 transmembrane protein 70 2.36508
BRAF B-Raf proto-oncogene, serine/threonine kinase 2.35792
KDELR2 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 2.35792
YIPF7 Yip1 domain family, member 7 2.32651
APLN apelin 2.31575
FAM234B family with sequence similarity 234 member B 2.31496
SEPTIN4 septin 4 2.30272
SPECC1L sperm antigen with calponin homology and coiled-coil domains 1-like 2.3018
MYO1C myosin IC 2.28535
GPHN gephyrin 2.28265
AATF apoptosis antagonizing transcription factor 2.26165
ADGRL3 adhesion G protein-coupled receptor L3 2.24786
EID2 EP300 interacting inhibitor of differentiation 2 2.24564
MGAT1 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 2.24548
CCDC138 coiled-coil domain containing 138 2.2409
GRM7 glutamate receptor, metabotropic 7 2.23574
DOK5 docking protein 5 2.19529
ZNF445 zinc finger protein 445 2.18548
IFT81 intraflagellar transport 81 2.18349
NADSYN1 NAD synthetase 1 2.13032
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 2.12168
MAP10 microtubule-associated protein 10 2.11277
TMEM217 transmembrane protein 217 2.09477
HSD3B7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 2.09045
NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain) 2.09045
LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) 2.08915
FAM3A family with sequence similarity 3, member A 2.08104
HMGB3 high mobility group box 3 2.07918
TAF13 TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa 2.05851
ATOSB atos homolog B 2.05118
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 2.04645
TRMT1 tRNA methyltransferase 1 homolog (S. cerevisiae) 2.04645
MRC2 mannose receptor, C type 2 2.04547
RAB29 RAB29, member RAS oncogene family 2.02932
PHF11 PHD finger protein 11 2.0201
LURAP1 leucine rich adaptor protein 1 2.01843
PSMD7 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 2.00151
GARS1 glycyl-tRNA synthetase 1 2.00151

decreased expression

Symbol Name Standardized Value
PCED1B PC-esterase domain containing 1B -3.46128
FAM162B family with sequence similarity 162, member B -3.46128
MUC16 mucin 16, cell surface associated -3.46128
SGMS2 sphingomyelin synthase 2 -3.46128
SERPINE3 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 -3.46128
CR1 complement component (3b/4b) receptor 1 (Knops blood group) -3.46128
CPO carboxypeptidase O -3.46128
TP53INP2 tumor protein p53 inducible nuclear protein 2 -3.46128
ABRACL ABRA C-terminal like -3.46128
SACK1A scaffolding CK1 anchoring protein A -3.46128
H2AX H2A.X variant histone -3.46128
RIBC2 RIB43A domain with coiled-coils 2 -3.46128
TUBA4B tubulin, alpha 4b -3.35356
GUCY2D guanylate cyclase 2D, membrane (retina-specific) -3.35356
RGPD4 RANBP2-like and GRIP domain containing 4 -3.35356
DNAI7 dynein axonemal intermediate chain 7 -3.35356
LOC124902436 talanin -3.35356
MPL MPL proto-oncogene, thrombopoietin receptor -3.35356
SULT6B1 sulfotransferase family, cytosolic, 6B, member 1 -3.35356
RSPH1 radial spoke head 1 homolog (Chlamydomonas) -3.35356
PNMA8C PNMA family member 8C -3.35356
SMIM47 small integral membrane protein 47 -3.35356
PNMA6F PNMA family member 6F -3.35356
SH2D7 SH2 domain containing 7 -3.35356
DERPC DERPC proline and glycine rich nuclear protein -3.35356
IGFL4 IGF-like family member 4 -3.35356
PXDC1 PX domain containing 1 -3.35356
DDTL D-dopachrome tautomerase-like -3.35356
HAO2 hydroxyacid oxidase 2 (long chain) -3.35356
NIBAN3 niban apoptosis regulator 3 -3.35356
CFAP65 cilia and flagella associated protein 65 -3.35356
SP140 SP140 nuclear body protein -3.35356
ABCC9 ATP-binding cassette, sub-family C (CFTR/MRP), member 9 -3.35356
EQTN equatorin, sperm acrosome associated -3.35356
ZNF492 zinc finger protein 492 -3.35356
NPR3 natriuretic peptide receptor 3 -3.35356
LBHD1 LBH domain containing 1 -3.35356
RGCC regulator of cell cycle -3.35356
OR52N2 olfactory receptor, family 52, subfamily N, member 2 -3.35356
WFDC8 WAP four-disulfide core domain 8 -3.35356
ARG1 arginase 1 -3.35356
TRPM8 transient receptor potential cation channel, subfamily M, member 8 -3.35356
LRTM3 leucine rich repeat transmembrane protein 3 -3.35356
SOSTDC1 sclerostin domain containing 1 -3.35356
ARHGEF10L Rho guanine nucleotide exchange factor (GEF) 10-like -3.29956
RBM46 RNA binding motif protein 46 -3.24414
TMEM154 transmembrane protein 154 -3.17681
RGS5 regulator of G-protein signaling 5 -3.13033
FTSJ1 FtsJ RNA methyltransferase homolog 1 (E. coli) -3.12114
FBXO48 F-box protein 48 -3.11636
HSBP1L1 heat shock factor binding protein 1-like 1 -3.11636
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase -3.06136
ZNF483 zinc finger protein 483 -2.99317
EFCAB14 EF-hand calcium binding domain 14 -2.88233
ADAMTS15 ADAM metallopeptidase with thrombospondin type 1 motif, 15 -2.81926
SCFD2 sec1 family domain containing 2 -2.73822
MYRIP myosin VIIA and Rab interacting protein -2.71674
PBX4 pre-B-cell leukemia homeobox 4 -2.71184
HJV hemojuvelin BMP co-receptor -2.70818
ZNF287 zinc finger protein 287 -2.64841
QSOX2 quiescin Q6 sulfhydryl oxidase 2 -2.63876
GPAM glycerol-3-phosphate acyltransferase, mitochondrial -2.60112
SLC50A1 solute carrier family 50 (sugar efflux transporter), member 1 -2.53943
MECOM MDS1 and EVI1 complex locus -2.53943
TMEM216 transmembrane protein 216 -2.53943
COL4A6 collagen, type IV, alpha 6 -2.52055
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -2.52055
APOC1 apolipoprotein C-I -2.49308
GPR137 G protein-coupled receptor 137 -2.48617
POLI polymerase (DNA directed) iota -2.48617
NAT14 N-acetyltransferase 14 (GCN5-related, putative) -2.44452
KCNH8 potassium channel, voltage gated eag related subfamily H, member 8 -2.41445
PDZRN4 PDZ domain containing ring finger 4 -2.39231
DCAF12L1 DDB1 and CUL4 associated factor 12-like 1 -2.39231
EID2B EP300 interacting inhibitor of differentiation 2B -2.39231
CFAP251 cilia and flagella associated protein 251 -2.37546
POGLUT1 protein O-glucosyltransferase 1 -2.36396
ADD2 adducin 2 (beta) -2.34187
WHRN whirlin -2.33083
TSPAN17 tetraspanin 17 -2.32686
PFDN1 prefoldin subunit 1 -2.32651
IL7 interleukin 7 -2.32498
BAG1 BCL2-associated athanogene -2.31575
MON2 MON2 homolog (S. cerevisiae) -2.30994
BCL6B B-cell CLL/lymphoma 6, member B -2.30523
PDK1 pyruvate dehydrogenase kinase, isozyme 1 -2.28265
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 -2.26165
PRX periaxin -2.2409
THAP9 THAP domain containing 9 -2.23098
KCNAB3 potassium channel, voltage gated subfamily A regulatory beta subunit 3 -2.224
HSD17B2 hydroxysteroid (17-beta) dehydrogenase 2 -2.224
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -2.21951
ACTN4 actinin, alpha 4 -2.2087
TATDN3 TatD DNase domain containing 3 -2.18277
IL11 interleukin 11 -2.13518
RBM44 RNA binding motif protein 44 -2.13518
LPIN3 lipin 3 -2.11816
PRELID1 PRELI domain containing 1 -2.11443
ZNF43 zinc finger protein 43 -2.09477
NAB2 NGFI-A binding protein 2 (EGR1 binding protein 2) -2.09045
TMEM11 transmembrane protein 11 -2.07918
CA3 carbonic anhydrase III -2.07918
ITGA9 integrin, alpha 9 -2.07049
FOCAD focadhesin -2.06569
RETREG3 reticulophagy regulator family member 3 -2.05118
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -2.04875
PUSL1 pseudouridylate synthase-like 1 -2.04645
GCNT4 glucosaminyl (N-acetyl) transferase 4, core 2 -2.02437
FRAS1 Fraser extracellular matrix complex subunit 1 -2.01938
KLHL32 kelch-like family member 32 -2.00316
KLC1 kinesin light chain 1 -2.00151