SU8686 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description Homo sapiens (human) pancreatic adenocarcinoma cell line. The line was developed from a wedge biosy of a liver metastasis of a pancreatic ductal carcinoma. (BRENDA Tissue and Enzyme Source Ontology, BTO_0001904)
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Genes

93 genes with high or low copy number in SU8686 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
SNAR-D small ILF3/NF90-associated RNA D 2.93899
NAPSB napsin B aspartic peptidase, pseudogene 2.93899
ZNF473 zinc finger protein 473 2.93899
KCNC3 potassium channel, voltage gated Shaw related subfamily C, member 3 2.93899
FLJ26850 FLJ26850 protein 2.93899
NR1H2 nuclear receptor subfamily 1, group H, member 2 2.93899
MYH14 myosin, heavy chain 14, non-muscle 2.93899
IZUMO2 IZUMO family member 2 2.93899
VRK3 vaccinia related kinase 3 2.93899
SNAR-B2 small ILF3/NF90-associated RNA B2 2.93899
SNAR-A3 small ILF3/NF90-associated RNA A3 2.76305
RAB4B RAB4B, member RAS oncogene family 2.59653
SNRPA small nuclear ribonucleoprotein polypeptide A 2.59653
RAB4B-EGLN2 RAB4B-EGLN2 readthrough (NMD candidate) 2.59653
MIA-RAB4B MIA-RAB4B readthrough (NMD candidate) 2.59653
ITPKC inositol-trisphosphate 3-kinase C 2.59653
C19ORF54 chromosome 19 open reading frame 54 2.59653
ADCK4 aarF domain containing kinase 4 2.59653
EGLN2 egl-9 family hypoxia-inducible factor 2 2.59653
NUMBL numb homolog (Drosophila)-like 2.59653
MIA melanoma inhibitory activity 2.59653
LTBP4 latent transforming growth factor beta binding protein 4 2.44392
SHKBP1 SH3KBP1 binding protein 1 2.44392
SPTBN4 spectrin, beta, non-erythrocytic 4 2.39327
BLVRB biliverdin reductase B 2.36889
SIRT2 sirtuin 2 2.36889
RINL Ras and Rab interactor-like 2.36889
FBXO17 F-box protein 17 2.36889
FBXO27 F-box protein 27 2.36889
NFKBIB nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta 2.36889
SARS2 seryl-tRNA synthetase 2, mitochondrial 2.36889
HNRNPL heterogeneous nuclear ribonucleoprotein L 2.36889
MRPS12 mitochondrial ribosomal protein S12 2.36889
ECH1 enoyl CoA hydratase 1, peroxisomal 2.36889
SERTAD1 SERTA domain containing 1 2.35236
PLD3 phospholipase D family, member 3 2.35236
SERTAD3 SERTA domain containing 3 2.35236
PRX periaxin 2.35236
HIPK4 homeodomain interacting protein kinase 4 2.35236
GMFG glia maturation factor, gamma 2.30944
PLEKHG2 pleckstrin homology domain containing, family G (with RhoGef domain) member 2 2.283
SELV selenoprotein V 2.283
DYRK1B dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B 2.283
PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) 2.283
RPS16 ribosomal protein S16 2.283
EID2 EP300 interacting inhibitor of differentiation 2 2.283
MED29 mediator complex subunit 29 2.283
FCGBP Fc fragment of IgG binding protein 2.283
PSMC4 proteasome (prosome, macropain) 26S subunit, ATPase, 4 2.283
LGALS13 lectin, galactoside-binding, soluble, 13 2.283
LEUTX leucine twenty homeobox 2.283
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 2.283
MIR4530 microRNA 4530 2.283
DLL3 delta-like 3 (Drosophila) 2.283
ZNF546 zinc finger protein 546 2.283
EID2B EP300 interacting inhibitor of differentiation 2B 2.283
SAMD4B sterile alpha motif domain containing 4B 2.283
TIMM50 translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) 2.283
ZFP36 ZFP36 ring finger protein 2.283
FBL fibrillarin 2.283
LOC100129935 lectin, galactoside-binding, soluble, 14 pseudogene 2.26395
LGALS17A Charcot-Leyden crystal protein pseudogene 2.26395
LGALS14 lectin, galactoside-binding, soluble, 14 2.26395
LGALS16 lectin, galactoside-binding, soluble, 16 2.26395
CLC Charcot-Leyden crystal galectin 2.26395
KIF21A kinesin family member 21A 2.11167
CYP2A6 cytochrome P450, family 2, subfamily A, polypeptide 6 2.10597
C12ORF40 chromosome 12 open reading frame 40 2.09529
ABCD2 ATP-binding cassette, sub-family D (ALD), member 2 2.09529

low copy number

Symbol Name Standardized Value
OR51A4 olfactory receptor, family 51, subfamily A, member 4 -2.83827
ZNF737 zinc finger protein 737 -2.82043
ZNF826P zinc finger protein 826, pseudogene -2.81247
SNORA30 small nucleolar RNA, H/ACA box 30 -2.79995
FOCAD focadhesin -2.7828
HACD4 3-hydroxyacyl-CoA dehydratase 4 -2.78237
IFNB1 interferon, beta 1, fibroblast -2.77588
IFNW1 interferon, omega 1 -2.77446
IFNA21 interferon, alpha 21 -2.77074
IFNA4 interferon, alpha 4 -2.7694
IFNA17 interferon, alpha 17 -2.76453
IFNA16 interferon, alpha 16 -2.76453
IFNA10 interferon, alpha 10 -2.75972
IFNA7 interferon, alpha 7 -2.75972
IFNA14 interferon, alpha 14 -2.75972
IFNA22P interferon, alpha 22, pseudogene -2.75555
IFNA5 interferon, alpha 5 -2.74973
KLHL9 kelch-like family member 9 -2.74526
IFNA6 interferon, alpha 6 -2.74032
IFNA13 interferon, alpha 13 -2.73798
IFNA2 interferon, alpha 2 -2.73608
IFNA8 interferon, alpha 8 -2.73024
IFNA1 interferon, alpha 1 -2.72828
IFNE interferon, epsilon -2.72466