SW1088 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Similar Terms
Downloads & Tools

Genes

53 genes with high or low copy number in SW1088 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
COBL cordon-bleu WH2 repeat protein 2.30944
POM121L12 POM121 transmembrane nucleoporin-like 12 2.24845
RP9 retinitis pigmentosa 9 (autosomal dominant) 2.08712
BBS9 Bardet-Biedl syndrome 9 2.08712
NT5C3A 5'-nucleotidase, cytosolic IIIA 2.08712
FKBP9 FK506 binding protein 9, 63 kDa 2.08712
AVL9 AVL9 homolog (S. cerevisiase) 2.08391

low copy number

Symbol Name Standardized Value
FAS-AS1 FAS antisense RNA 1 -3.83684
MIR4679-2 microRNA 4679-2 -3.83684
ANKRD22 ankyrin repeat domain 22 -3.83684
LIPN lipase, family member N -3.83684
LIPA lipase A, lysosomal acid, cholesterol esterase -3.83684
MIR4679-1 microRNA 4679-1 -3.83684
CH25H cholesterol 25-hydroxylase -3.83684
STAMBPL1 STAM binding protein-like 1 -3.83684
ACTA2 actin, alpha 2, smooth muscle, aorta -3.83684
FAS Fas cell surface death receptor -3.83684
LIPK lipase, family member K -3.7119
LIPF lipase, gastric -3.7119
LIPJ lipase, family member J -3.7119
LIPM lipase, family member M -3.7119
PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 -3.49112
RNLS renalase, FAD-dependent amine oxidase -3.486
ATAD1 ATPase family, AAA domain containing 1 -3.47205
CFL1P1 cofilin 1 (non-muscle) pseudogene 1 -3.47102
KLLN killin, p53-regulated DNA replication inhibitor -3.46614
PTEN phosphatase and tensin homolog -3.45826
IPMK inositol polyphosphate multikinase -3.29865
C9ORF72 chromosome 9 open reading frame 72 -2.83538
IFNK interferon, kappa -2.83538
EQTN equatorin, sperm acrosome associated -2.83167
MOB3B MOB kinase activator 3B -2.83114
LINC00032 long intergenic non-protein coding RNA 32 -2.82909
LRRC19 leucine rich repeat containing 19 -2.82668
CAAP1 caspase activity and apoptosis inhibitor 1 -2.82318
PLAA phospholipase A2-activating protein -2.82318
TEK TEK tyrosine kinase, endothelial -2.82318
IFT74 intraflagellar transport 74 -2.82083
LINGO2 leucine rich repeat and Ig domain containing 2 -2.79933
LOC100506422 putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 -2.79871
TUSC1 tumor suppressor candidate 1 -2.78941
IZUMO3 IZUMO family member 3 -2.77409
FFAR3 free fatty acid receptor 3 -2.76158
IFNA22P interferon, alpha 22, pseudogene -2.75555
IFNA5 interferon, alpha 5 -2.74973
ELAVL2 ELAV like neuron-specific RNA binding protein 2 -2.74526
KLHL9 kelch-like family member 9 -2.74526
IFNA6 interferon, alpha 6 -2.74032
IFNA13 interferon, alpha 13 -2.73798
IFNA2 interferon, alpha 2 -2.73608
IFNA8 interferon, alpha 8 -2.73024
IFNA1 interferon, alpha 1 -2.72828
IFNE interferon, epsilon -2.72466