SW1088 Gene Set

Dataset GDSC Cell Line Gene Expression Profiles
Category transcriptomics
Type cell line
Similar Terms
Downloads & Tools

Genes

197 genes with high or low expression in SW1088 relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
GGT5 gamma-glutamyltransferase 5 2.77554
SLC14A1 solute carrier family 14 (urea transporter), member 1 (Kidd blood group) 2.52318
PAMR1 peptidase domain containing associated with muscle regeneration 1 2.4294
EMID1 EMI domain containing 1 2.25471
ENG endoglin 2.23832
PODNL1 podocan-like 1 2.22584
FMO2 flavin containing monooxygenase 2 (non-functional) 2.1578
MYH11 myosin, heavy chain 11, smooth muscle 2.01835
ITGA8 integrin, alpha 8 1.93589
FMO3 flavin containing monooxygenase 3 1.91805
FOXF1 forkhead box F1 1.89718
POM121L9P POM121 transmembrane nucleoporin-like 9, pseudogene 1.89242
PDGFRB platelet-derived growth factor receptor, beta polypeptide 1.88111
ABLIM3 actin binding LIM protein family, member 3 1.88014
LBP lipopolysaccharide binding protein 1.86157
SCARA3 scavenger receptor class A, member 3 1.77065
CABIN1 calcineurin binding protein 1 1.76605
HIP1 huntingtin interacting protein 1 1.7364
THY1 Thy-1 cell surface antigen 1.70967
LMOD1 leiomodin 1 (smooth muscle) 1.70932
YKT6 YKT6 v-SNARE homolog (S. cerevisiae) 1.70343
TNS2 tensin 2 1.70101
MEPE matrix extracellular phosphoglycoprotein 1.69171
GNA12 guanine nucleotide binding protein (G protein) alpha 12 1.68906
TBXAS1 thromboxane A synthase 1 (platelet) 1.6788
OLFML2B olfactomedin-like 2B 1.66112
PPAP2A phosphatidic acid phosphatase type 2A 1.6557
PKDREJ polycystin (PKD) family receptor for egg jelly 1.65467
SMTN smoothelin 1.64612
WFDC1 WAP four-disulfide core domain 1 1.64278
CXCL14 chemokine (C-X-C motif) ligand 14 1.6277
MOCS2 molybdenum cofactor synthesis 2 1.62475
PTCH1 patched 1 1.62044
MAP7D1 MAP7 domain containing 1 1.60985
ILK integrin-linked kinase 1.60335
ARHGAP24 Rho GTPase activating protein 24 1.59221
BCL7B B-cell CLL/lymphoma 7B 1.58282
MMP11 matrix metallopeptidase 11 1.5802
LZTR1 leucine-zipper-like transcription regulator 1 1.56705
SLC6A5 solute carrier family 6 (neurotransmitter transporter), member 5 1.55215
ZNHIT1 zinc finger, HIT-type containing 1 1.55193
CHI3L1 chitinase 3-like 1 (cartilage glycoprotein-39) 1.54464
CLEC3B C-type lectin domain family 3, member B 1.54427
COL10A1 collagen, type X, alpha 1 1.53641
PCOLCE procollagen C-endopeptidase enhancer 1.53275
VCL vinculin 1.53192
CCDC102B coiled-coil domain containing 102B 1.52593
SIGLEC15 sialic acid binding Ig-like lectin 15 1.51459
ACOX3 acyl-CoA oxidase 3, pristanoyl 1.51303
VPS16 vacuolar protein sorting 16 homolog (S. cerevisiae) 1.50953
EFCC1 EF-hand and coiled-coil domain containing 1 1.50654
SLC9A3R2 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2 1.5064
SYNPO synaptopodin 1.48416
MYLK myosin light chain kinase 1.48383
CNTNAP3B contactin associated protein-like 3B 1.47811
ANXA6 annexin A6 1.47571
IL1R1 interleukin 1 receptor, type I 1.46042
UBTD1 ubiquitin domain containing 1 1.4596
C2 complement component 2 1.4592
SFRP4 secreted frizzled-related protein 4 1.44806
GCK glucokinase (hexokinase 4) 1.44788
HARS histidyl-tRNA synthetase 1.43869
GBP1 guanylate binding protein 1, interferon-inducible 1.43866
POFUT1 protein O-fucosyltransferase 1 1.43607
COL15A1 collagen, type XV, alpha 1 1.43597
ACTG2 actin, gamma 2, smooth muscle, enteric 1.43325
KIF3B kinesin family member 3B 1.43222
IDO1 indoleamine 2,3-dioxygenase 1 1.42659
MAN1C1 mannosidase, alpha, class 1C, member 1 1.41845

low expression

Symbol Name Standardized Value
LIPA lipase A, lysosomal acid, cholesterol esterase -3.53725
DUS1L dihydrouridine synthase 1-like (S. cerevisiae) -3.53725
RGS10 regulator of G-protein signaling 10 -3.46918
RAG1 recombination activating gene 1 -2.74742
RAPGEF5 Rap guanine nucleotide exchange factor (GEF) 5 -2.69177
CALCB calcitonin-related polypeptide beta -2.53147
OPRM1 opioid receptor, mu 1 -2.40822
NUP50 nucleoporin 50kDa -2.35028
IFT74 intraflagellar transport 74 -2.31625
AJAP1 adherens junctions associated protein 1 -2.31373
SPATA5L1 spermatogenesis associated 5-like 1 -2.26799
ATF7IP2 activating transcription factor 7 interacting protein 2 -2.24131
SLC37A4 solute carrier family 37 (glucose-6-phosphate transporter), member 4 -2.21994
MUC3B mucin 3B, cell surface associated -2.19922
MADCAM1 mucosal vascular addressin cell adhesion molecule 1 -2.16614
CHD7 chromodomain helicase DNA binding protein 7 -2.1348
CDKN2D cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) -2.13043
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 -2.12112
FAS Fas cell surface death receptor -2.12067
RPH3AL rabphilin 3A-like (without C2 domains) -2.1188
SLC25A23 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23 -2.11529
TNFSF18 tumor necrosis factor (ligand) superfamily, member 18 -2.11452
DDX31 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 -2.05702
ATF6B activating transcription factor 6 beta -2.02974
POLR1D polymerase (RNA) I polypeptide D, 16kDa -2.02774
FZD6 frizzled class receptor 6 -1.98425
EFTUD1 elongation factor Tu GTP binding domain containing 1 -1.95977
MDM4 MDM4, p53 regulator -1.9589
RPL4 ribosomal protein L4 -1.95347
PSTPIP2 proline-serine-threonine phosphatase interacting protein 2 -1.93416
IER3 immediate early response 3 -1.92708
FN3K fructosamine 3 kinase -1.91886
PDIA2 protein disulfide isomerase family A, member 2 -1.91731
BMP8B bone morphogenetic protein 8b -1.89718
ACTA2 actin, alpha 2, smooth muscle, aorta -1.89293
DPP6 dipeptidyl-peptidase 6 -1.88693
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 -1.87794
HTR4 5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled -1.87532
ZBTB14 zinc finger and BTB domain containing 14 -1.87337
TAF6L TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa -1.86854
RPLP1 ribosomal protein, large, P1 -1.85951
MAK male germ cell-associated kinase -1.8528
OR10H3 olfactory receptor, family 10, subfamily H, member 3 -1.84863
ADRA1A adrenoceptor alpha 1A -1.84083
DUSP26 dual specificity phosphatase 26 (putative) -1.83104
VIPR2 vasoactive intestinal peptide receptor 2 -1.82145
RPS6KA1 ribosomal protein S6 kinase, 90kDa, polypeptide 1 -1.81698
MRPL9 mitochondrial ribosomal protein L9 -1.80936
ABCA12 ATP-binding cassette, sub-family A (ABC1), member 12 -1.80456
HMHA1 histocompatibility (minor) HA-1 -1.79819
DCLRE1A DNA cross-link repair 1A -1.79135
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -1.78952
ZNF155 zinc finger protein 155 -1.78764
TESPA1 thymocyte expressed, positive selection associated 1 -1.77781
RAB11A RAB11A, member RAS oncogene family -1.77632
VRK2 vaccinia related kinase 2 -1.76218
POU2F3 POU class 2 homeobox 3 -1.7592
HRASLS HRAS-like suppressor -1.75689
CYP2A6 cytochrome P450, family 2, subfamily A, polypeptide 6 -1.74831
PTEN phosphatase and tensin homolog -1.74615
ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9) -1.74416
PTK2B protein tyrosine kinase 2 beta -1.73802
SEC14L5 SEC14-like 5 (S. cerevisiae) -1.73604
RPS19 ribosomal protein S19 -1.7357
INSL5 insulin-like 5 -1.72864
GPHN gephyrin -1.72634
COPG2IT1 COPG2 imprinted transcript 1 (non-protein coding) -1.71591
PTER phosphotriesterase related -1.7117
PRKAB1 protein kinase, AMP-activated, beta 1 non-catalytic subunit -1.69865
SLC16A5 solute carrier family 16 (monocarboxylate transporter), member 5 -1.68601
FGFBP1 fibroblast growth factor binding protein 1 -1.67915
COX5A cytochrome c oxidase subunit Va -1.66687
HRK harakiri, BCL2 interacting protein -1.65619
TTTY2 testis-specific transcript, Y-linked 2 (non-protein coding) -1.63709
CASZ1 castor zinc finger 1 -1.62526
ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative) -1.62503
SP4 Sp4 transcription factor -1.61649
SIRT5 sirtuin 5 -1.59272
DNAJA4 DnaJ (Hsp40) homolog, subfamily A, member 4 -1.58632
COPZ1 coatomer protein complex, subunit zeta 1 -1.58271
EPS8L2 EPS8-like 2 -1.575
KEL Kell blood group, metallo-endopeptidase -1.57257
PAX2 paired box 2 -1.57162
RPP38 ribonuclease P/MRP 38kDa subunit -1.57068
KIAA1324 KIAA1324 -1.56553
XIST X inactive specific transcript (non-protein coding) -1.56083
BRWD1 bromodomain and WD repeat domain containing 1 -1.55858
EFNA2 ephrin-A2 -1.55606
COG2 component of oligomeric golgi complex 2 -1.55522
RPL7 ribosomal protein L7 -1.55317
OXCT2 3-oxoacid CoA transferase 2 -1.55154
LOC390998 ribosomal protein L10 pseudogene -1.54911
TULP1 tubby like protein 1 -1.54672
PGGT1B protein geranylgeranyltransferase type I, beta subunit -1.54393
RLBP1 retinaldehyde binding protein 1 -1.54016
NDC1 NDC1 transmembrane nucleoporin -1.53935
PRKY protein kinase, Y-linked, pseudogene -1.52958
RPL35A ribosomal protein L35a -1.52742
EFNA3 ephrin-A3 -1.52444
SLC38A3 solute carrier family 38, member 3 -1.52326
RPL9 ribosomal protein L9 -1.52146
ZFAND1 zinc finger, AN1-type domain 1 -1.52098
TKFC triokinase/FMN cyclase -1.51364
APOBEC2 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2 -1.51121
FPR3 formyl peptide receptor 3 -1.5065
RPL30 ribosomal protein L30 -1.49434
RPL10A ribosomal protein L10a -1.48713
TRAF6 TNF receptor-associated factor 6, E3 ubiquitin protein ligase -1.48417
TRPV4 transient receptor potential cation channel, subfamily V, member 4 -1.48259
LGALS4 lectin, galactoside-binding, soluble, 4 -1.47912
SLC22A14 solute carrier family 22, member 14 -1.47733
MPL MPL proto-oncogene, thrombopoietin receptor -1.47438
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -1.47145
ANP32A acidic (leucine-rich) nuclear phosphoprotein 32 family, member A -1.47098
ZBTB7B zinc finger and BTB domain containing 7B -1.47024
RPS27 ribosomal protein S27 -1.47005
RFPL3 ret finger protein-like 3 -1.46826
COMMD1 copper metabolism (Murr1) domain containing 1 -1.46736
RPS17 ribosomal protein S17 -1.46472
RBMXL2 RNA binding motif protein, X-linked-like 2 -1.46466
RPS13 ribosomal protein S13 -1.46189
OMD osteomodulin -1.44723
PPP1R14D protein phosphatase 1, regulatory (inhibitor) subunit 14D -1.44386
FGF12 fibroblast growth factor 12 -1.44121
RPS6 ribosomal protein S6 -1.43965
NGDN neuroguidin, EIF4E binding protein -1.43736
EIF3H eukaryotic translation initiation factor 3, subunit H -1.43073
ZBED4 zinc finger, BED-type containing 4 -1.42669