SW1271 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description disease: carcinoma; small cell lung cancer (Cell Line Ontology, CLO_0009184)
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Genes

519 genes with high or low copy number in SW1271 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
BPIFB6 BPI fold containing family B, member 6 2.93899
BPIFB3 BPI fold containing family B, member 3 2.93899
BPIFA2 BPI fold containing family A, member 2 2.93899
MAPRE1 microtubule-associated protein, RP/EB family, member 1 2.93899
BPIFA4P BPI fold containing family A, member 4, pseudogene 2.93899
DNMT3B DNA (cytosine-5-)-methyltransferase 3 beta 2.93899
BPIFB4 BPI fold containing family B, member 4 2.93899
SUN5 Sad1 and UNC84 domain containing 5 2.93899
ZNF438 zinc finger protein 438 2.93899
BPIFA1 BPI fold containing family A, member 1 2.93899
BPIFA3 BPI fold containing family A, member 3 2.93899
BPIFB2 BPI fold containing family B, member 2 2.93899
OR2L5 olfactory receptor, family 2, subfamily L, member 5 2.76305
OR2L2 olfactory receptor, family 2, subfamily L, member 2 2.76305
COX20 COX20 cytochrome c oxidase assembly factor 2.76305
HNRNPU-AS1 HNRNPU antisense RNA 1 2.76305
OR2G6 olfactory receptor, family 2, subfamily G, member 6 2.76305
LYPD8 LY6/PLAUR domain containing 8 2.76305
OR2M1P olfactory receptor, family 2, subfamily M, member 1 pseudogene 2.76305
OR2M2 olfactory receptor, family 2, subfamily M, member 2 2.76305
OR2T3 olfactory receptor, family 2, subfamily T, member 3 2.76305
BPIFB1 BPI fold containing family B, member 1 2.76305
OR2AK2 olfactory receptor, family 2, subfamily AK, member 2 2.76305
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 2.76305
OR2L3 olfactory receptor, family 2, subfamily L, member 3 2.76305
SH3BP5L SH3-binding domain protein 5-like 2.76305
OR2T27 olfactory receptor, family 2, subfamily T, member 27 2.76305
OR2M7 olfactory receptor, family 2, subfamily M, member 7 2.76305
OR2M3 olfactory receptor, family 2, subfamily M, member 3 2.76305
COMMD7 COMM domain containing 7 2.76305
OR2M4 olfactory receptor, family 2, subfamily M, member 4 2.76305
OR2T33 olfactory receptor, family 2, subfamily T, member 33 2.76305
OR2T12 olfactory receptor, family 2, subfamily T, member 12 2.76305
OR2T6 olfactory receptor, family 2, subfamily T, member 6 2.76305
OR2T4 olfactory receptor, family 2, subfamily T, member 4 2.76305
OR2T5 olfactory receptor, family 2, subfamily T, member 5 2.76305
OR2T2 olfactory receptor, family 2, subfamily T, member 2 2.76305
OR2T1 olfactory receptor, family 2, subfamily T, member 1 2.76305
OR14I1 olfactory receptor, family 14, subfamily I, member 1 2.76305
OR2L8 olfactory receptor, family 2, subfamily L, member 8 (gene/pseudogene) 2.76305
MIR3124 microRNA 3124 2.76305
OR2L1P olfactory receptor, family 2, subfamily L, member 1 pseudogene 2.76305
OR14C36 olfactory receptor, family 14, subfamily C, member 36 2.76305
EFCAB2 EF-hand calcium binding domain 2 2.76305
LOC255654 uncharacterized LOC255654 2.64759
OR2G2 olfactory receptor, family 2, subfamily G, member 2 2.64759
OR2W5 olfactory receptor, family 2, subfamily W, member 5 (gene/pseudogene) 2.64759
OR2G3 olfactory receptor, family 2, subfamily G, member 3 2.64759
OR14A16 olfactory receptor, family 14, subfamily A, member 16 2.64759
TRIM58 tripartite motif containing 58 2.64759
OR2B11 olfactory receptor, family 2, subfamily B, member 11 2.64759
CNST consortin, connexin sorting protein 2.64759
MIR3916 microRNA 3916 2.64759
TFB2M transcription factor B2, mitochondrial 2.64759
OR2W3 olfactory receptor, family 2, subfamily W, member 3 2.64759
MTPAP mitochondrial poly(A) polymerase 2.64759
ACTR5 ARP5 actin-related protein 5 homolog (yeast) 2.64759
MAP3K8 mitogen-activated protein kinase kinase kinase 8 2.64759
ZNF695 zinc finger protein 695 2.64759
LOC149950 uncharacterized LOC149950 2.64759
NLRP3 NLR family, pyrin domain containing 3 2.64759
LYZL2 lysozyme-like 2 2.64759
DHX35 DEAH (Asp-Glu-Ala-His) box polypeptide 35 2.64759
ZNF670 zinc finger protein 670 2.64759
SLC32A1 solute carrier family 32 (GABA vesicular transporter), member 1 2.64759
OR11L1 olfactory receptor, family 11, subfamily L, member 1 2.64759
GCSAML germinal center-associated, signaling and motility-like 2.64759
SCCPDH saccharopine dehydrogenase (putative) 2.64759
GCSAML-AS1 GCSAML antisense RNA 1 2.64759
C20ORF203 chromosome 20 open reading frame 203 2.64759
OR2L13 olfactory receptor, family 2, subfamily L, member 13 2.64759
CDK5RAP1 CDK5 regulatory subunit associated protein 1 2.64759
OR6F1 olfactory receptor, family 6, subfamily F, member 1 2.64759
OR1C1 olfactory receptor, family 1, subfamily C, member 1 2.64759
OR2C3 olfactory receptor, family 2, subfamily C, member 3 2.64759
ZNF124 zinc finger protein 124 2.64759
ZNF496 zinc finger protein 496 2.64759
PPP1R16B protein phosphatase 1, regulatory subunit 16B 2.64759
OR13G1 olfactory receptor, family 13, subfamily G, member 1 2.64759
OR2T8 olfactory receptor, family 2, subfamily T, member 8 2.64759
ZNF669 zinc finger protein 669 2.64759
C1ORF229 chromosome 1 open reading frame 229 2.64759
ZNF670-ZNF695 ZNF670-ZNF695 readthrough (NMD candidate) 2.64759
VN1R5 vomeronasal 1 receptor 5 (gene/pseudogene) 2.64759
SACK1D scaffolding CK1 anchoring protein D 2.64759
LOC339568 uncharacterized LOC339568 2.59653
SNTA1 syntrophin, alpha 1 2.59653
KIAA1462 KIAA1462 2.59653
DSN1 DSN1, MIS12 kinetochore complex component 2.59653
AHCTF1 AT hook containing transcription factor 1 2.59653
CHMP4B charged multivesicular body protein 4B 2.49065
TLDC2 TBC/LysM-associated domain containing 2 2.49065
PTCHD3P1 patched domain containing 3 pseudogene 1 2.49065
WAC-AS1 WAC antisense RNA 1 (head to head) 2.49065
TGIF2 TGFB-induced factor homeobox 2 2.49065
WAC WW domain containing adaptor with coiled-coil 2.49065
XKR7 XK, Kell blood group complex subunit-related family, member 7 2.49065
LYZL1 lysozyme-like 1 2.49065
RBL1 retinoblastoma-like 1 2.49065
SAMHD1 SAM domain and HD domain 1 2.49065
SLA2 Src-like-adaptor 2 2.49065
NECAB3 N-terminal EF-hand calcium binding protein 3 2.49065
BAMBI BMP and activin membrane-bound inhibitor 2.49065
ARHGAP40 Rho GTPase activating protein 40 2.49065
SOGA1 suppressor of glucose, autophagy associated 1 2.49065
ASXL1 additional sex combs like transcriptional regulator 1 2.49065
TGIF2-C20ORF24 TGIF2-C20orf24 readthrough 2.49065
ARMC4 armadillo repeat containing 4 2.49065
MYL9 myosin, light chain 9, regulatory 2.49065
LINC00837 long intergenic non-protein coding RNA 837 2.49065
C20ORF144 chromosome 20 open reading frame 144 2.49065
TTLL9 tubulin tyrosine ligase-like family member 9 2.49065
MIR5586 microRNA 5586 2.49065
MKX mohawk homeobox 2.49065
KIF3B kinesin family member 3B 2.49065
MROH8 maestro heat-like repeat family member 8 2.49065
CCM2L cerebral cavernous malformation 2-like 2.49065
VSTM2L V-set and transmembrane domain containing 2 like 2.49065
C20ORF24 chromosome 20 open reading frame 24 2.49065
PDRG1 p53 and DNA-damage regulated 1 2.49065
NDRG3 NDRG family member 3 2.49065
MPP7 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) 2.49065
ACTL10 actin-like 10 2.49065
E2F1 E2F transcription factor 1 2.49065
ADIG adipogenin 2.49065
TTI1 TELO2 interacting protein 1 2.49065
GHRH growth hormone releasing hormone 2.44392
RBM12 RNA binding motif protein 12 2.44392
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 2.44392
TSPY26P testis specific protein, Y-linked 26, pseudogene 2.44392
CTNNBL1 catenin, beta like 1 2.44392
MANBAL mannosidase, beta A, lysosomal-like 2.44392
PLAGL2 pleiomorphic adenoma gene-like 2 2.44392
SPAG4 sperm associated antigen 4 2.44392
HIPK1 homeodomain interacting protein kinase 1 2.44392
RPRD1B regulation of nuclear pre-mRNA domain containing 1B 2.44392
POFUT1 protein O-fucosyltransferase 1 2.44392
AP4B1-AS1 AP4B1 antisense RNA 1 2.44392
DUSP15 dual specificity phosphatase 15 2.44392
CPNE1 copine I 2.44392
ZNF341 zinc finger protein 341 2.44392
ERGIC3 ERGIC and golgi 3 2.44392
RPN2 ribophorin II 2.44392
TGM2 transglutaminase 2 2.44392
ROMO1 reactive oxygen species modulator 1 2.44392
FER1L4 fer-1-like family member 4, pseudogene (functional) 2.44392
DCLRE1B DNA cross-link repair 1B 2.44392
TM9SF4 transmembrane 9 superfamily protein member 4 2.44392
OLFML3 olfactomedin-like 3 2.44392
MYLK2 myosin light chain kinase 2 2.44392
HCK HCK proto-oncogene, Src family tyrosine kinase 2.44392
PTPN22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) 2.44392
PXMP4 peroxisomal membrane protein 4, 24kDa 2.44392
BCL2L15 BCL2-like 15 2.44392
NFS1 NFS1 cysteine desulfurase 2.44392
LOC100287792 uncharacterized LOC100287792 2.44392
RSBN1 round spermatid basic protein 1 2.44392
FOXS1 forkhead box S1 2.44392
AP4B1 adaptor-related protein complex 4, beta 1 subunit 2.44392
DLGAP4 discs, large (Drosophila) homolog-associated protein 4 2.44392
KIAA1755 KIAA1755 2.41451
RALGAPB Ral GTPase activating protein, beta subunit (non-catalytic) 2.41451
BPI bactericidal/permeability-increasing protein 2.41451
RBM39 RNA binding motif protein 39 2.41451
SNHG17 small nucleolar RNA host gene 17 2.41451
EPB41L1 erythrocyte membrane protein band 4.1-like 1 2.41451
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 2.41451
SRC SRC proto-oncogene, non-receptor tyrosine kinase 2.41451
LBP lipopolysaccharide binding protein 2.41451
LINC00657 long intergenic non-protein coding RNA 657 2.41451
SNHG11 small nucleolar RNA host gene 11 2.41451
AAR2 AAR2 splicing factor homolog (S. cerevisiae) 2.41451
LINC00489 long intergenic non-protein coding RNA 489 2.41451
SNORA71C small nucleolar RNA, H/ACA box 71C 2.41451
MIR4755 microRNA 4755 2.41451
SNORA71A small nucleolar RNA, H/ACA box 71A 2.41451
ASIP agouti signaling protein 2.41451
SNORA71D small nucleolar RNA, H/ACA box 71D 2.41451
SNORA71B small nucleolar RNA, H/ACA box 71B 2.41451
RALY RALY heterogeneous nuclear ribonucleoprotein 2.41451
GDF5 growth differentiation factor 5 2.39327
CEP250 centrosomal protein 250kDa 2.39327
PROCR protein C receptor, endothelial 2.39327
C20ORF173 chromosome 20 open reading frame 173 2.39327
CNBD2 cyclic nucleotide binding domain containing 2 2.39327
SACK1C scaffolding CK1 anchoring protein C 2.39327
SCAND1 SCAN domain containing 1 2.39327
EIF6 eukaryotic translation initiation factor 6 2.39327
PHF20 PHD finger protein 20 2.39327
GDF5OS growth differentiation factor 5 opposite strand 2.39327
MMP24 matrix metallopeptidase 24 (membrane-inserted) 2.39327
TPX2 TPX2, microtubule-associated 2.39327
MMP24-AS1 MMP24 antisense RNA 1 2.39327
MIR499A microRNA 499a 2.36889
NNAT neuronatin 2.36889
AHCY adenosylhomocysteinase 2.36889
MIR499B microRNA 499b 2.36889
BLCAP bladder cancer associated protein 2.36889
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein 2.36889
EDEM2 ER degradation enhancer, mannosidase alpha-like 2 2.36889
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein 2.35236
DEFB121 defensin, beta 121 2.35236
HM13 histocompatibility (minor) 13 2.35236
GSS glutathione synthetase 2.35236
MIR3193 microRNA 3193 2.35236
DEFB124 defensin, beta 124 2.35236
BCL2L1 BCL2-like 1 2.35236
REM1 RAS (RAD and GEM)-like GTP-binding 1 2.35236
MYH7B myosin, heavy chain 7B, cardiac muscle, beta 2.35236
LINC00028 long intergenic non-protein coding RNA 28 2.35236
DEFB116 defensin, beta 116 2.35236
COX4I2 cytochrome c oxidase subunit IV isoform 2 (lung) 2.35236
DEFB119 defensin, beta 119 2.35236
ACSS2 acyl-CoA synthetase short-chain family member 2 2.35236
DEFB118 defensin, beta 118 2.35236
HM13-AS1 HM13 antisense RNA 1 2.35236
DEFB115 defensin, beta 115 2.35236
DEFB123 defensin, beta 123 2.35236
DEFB122 defensin, beta 122 (pseudogene) 2.35236
GGT7 gamma-glutamyltransferase 7 2.3178
MAP1LC3A microtubule-associated protein 1 light chain 3 alpha 2.3178
TP53INP2 tumor protein p53 inducible nuclear protein 2 2.3178
HMGB3P1 high mobility group box 3 pseudogene 1 2.3178
NCOA6 nuclear receptor coactivator 6 2.3178
MIR644A microRNA 644a 2.3178
DYNLRB1 dynein, light chain, roadblock-type 1 2.3178
PIGU phosphatidylinositol glycan anchor biosynthesis, class U 2.30944
ITCH itchy E3 ubiquitin protein ligase 2.30944
SNORD56 small nucleolar RNA, C/D box 56 2.24845
OR2T10 olfactory receptor, family 2, subfamily T, member 10 2.15203
OR2T11 olfactory receptor, family 2, subfamily T, member 11 (gene/pseudogene) 2.1494
HEPHL1 hephaestin-like 1 2.14116
MED17 mediator complex subunit 17 2.14116
VSTM5 V-set and transmembrane domain containing 5 2.14116
IZUMO1R IZUMO1 receptor, JUNO 2.14116
PANX1 pannexin 1 2.14116
LINC00670 long intergenic non-protein coding RNA 670 2.1316
OR2T34 olfactory receptor, family 2, subfamily T, member 34 2.12942
MTMR2 myotubularin related protein 2 2.12703
ANKRD49 ankyrin repeat domain 49 2.12703
FUT4 fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific) 2.12703
MRE11A MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 2.12703
SNORA8 small nucleolar RNA, H/ACA box 8 2.12703
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 2.12703
CEP295 centrosomal protein 295kDa 2.12703
PIWIL4 piwi-like RNA-mediated gene silencing 4 2.12703
MIR1304 microRNA 1304 2.12703
FAM76B family with sequence similarity 76, member B 2.12703
C11ORF54 chromosome 11 open reading frame 54 2.12703
SNORA18 small nucleolar RNA, H/ACA box 18 2.12703
SCARNA9 small Cajal body-specific RNA 9 2.12703
AMOTL1 angiomotin like 1 2.12703
CEP57 centrosomal protein 57kDa 2.12703
GPR83 G protein-coupled receptor 83 2.12703
KRT16P1 keratin 16 pseudogene 1 2.12572
HS3ST3A1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 2.12506
LOC441601 septin 7 pseudogene 2.12506
ARHGAP44 Rho GTPase activating protein 44 2.12439
MYOCD myocardin 2.12439
ELAC2 elaC ribonuclease Z 2 2.12439
SRSF8 serine/arginine-rich splicing factor 8 2.12225
DRD2 dopamine receptor D2 2.12225
AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 2.12225
IL18 interleukin 18 2.12225
COX10-AS1 COX10 antisense RNA 1 2.12225
KBTBD3 kelch repeat and BTB (POZ) domain containing 3 2.12225
EVPLL envoplakin-like 2.12225
MIR4301 microRNA 4301 2.12225
OR2T29 olfactory receptor, family 2, subfamily T, member 29 2.12225
TTC12 tetratricopeptide repeat domain 12 2.12225
JRKL JRK-like 2.12225
CASP4 caspase 4, apoptosis-related cysteine peptidase 2.12225
TEX12 testis expressed 12 2.12225
MIR1260B microRNA 1260b 2.12225
SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2.12225
PTS 6-pyruvoyltetrahydropterin synthase 2.12225
CCDC82 coiled-coil domain containing 82 2.12225
SHMT1 serine hydroxymethyltransferase 1 (soluble) 2.12225
HS3ST3B1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 2.12225
PGBD2 piggyBac transposable element derived 2 2.12225
NCAM1 neural cell adhesion molecule 1 2.12225
OR2M5 olfactory receptor, family 2, subfamily M, member 5 2.12225
CDRT15 CMT1A duplicated region transcript 15 2.12225
TOP3A topoisomerase (DNA) III alpha 2.12225
MGC12916 uncharacterized protein MGC12916 2.12225
OR2T35 olfactory receptor, family 2, subfamily T, member 35 2.12225
BCO2 beta-carotene oxygenase 2 2.12225
SESN3 sestrin 3 2.12225
JRKL-AS1 JRKL antisense RNA 1 2.12225
KDM4E lysine (K)-specific demethylase 4E 2.12225
ZNF672 zinc finger protein 672 2.12225
ENDOD1 endonuclease domain containing 1 2.12225
KDM4D lysine (K)-specific demethylase 4D 2.12225
ANKK1 ankyrin repeat and kinase domain containing 1 2.12225
CWC15 CWC15 spliceosome-associated protein 2.12225
CDRT15P1 CMT1A duplicated region transcript 15 pseudogene 1 2.12225
ZNF692 zinc finger protein 692 2.12225
COX10 COX10 heme A:farnesyltransferase cytochrome c oxidase assembly factor 2.12225
GRAPL GRB2-related adaptor protein-like 2.11344
KIF26B kinesin family member 26B 2.11167
GRAP GRB2-related adaptor protein 2.11167
SACK1G scaffolding CK1 anchoring protein G 2.11167
SMYD3 SET and MYND domain containing 3 2.11167
SLC5A10 solute carrier family 5 (sodium/sugar cotransporter), member 10 2.11167
ARHGAP20 Rho GTPase activating protein 20 2.10992
MSANTD4 Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 2.10992
TBC1D28 TBC1 domain family, member 28 2.10992
SDHD succinate dehydrogenase complex, subunit D, integral membrane protein 2.10992
LOC643733 caspase 4, apoptosis-related cysteine peptidase pseudogene 2.10992
FDXACB1 ferredoxin-fold anticodon binding domain containing 1 2.10992
MAML2 mastermind-like 2 (Drosophila) 2.10992
TRIM16L tripartite motif containing 16-like 2.10992
FOXO3B forkhead box O3B pseudogene 2.10992
OR4C12 olfactory receptor, family 4, subfamily C, member 12 2.10992
LOC440040 glutamate receptor, metabotropic 5 pseudogene 2.10992
TIMM8B translocase of inner mitochondrial membrane 8 homolog B (yeast) 2.10992
OR4C13 olfactory receptor, family 4, subfamily C, member 13 2.10992
CASP12 caspase 12 (gene/pseudogene) 2.10992
FDX1 ferredoxin 1 2.10992
ZNF286B zinc finger protein 286B 2.10992
CASP5 caspase 5, apoptosis-related cysteine peptidase 2.10992
CARD17 caspase recruitment domain family, member 17 2.10177
ACAT1 acetyl-CoA acetyltransferase 1 2.10177
CARD18 caspase recruitment domain family, member 18 2.10177
POU2AF1 POU class 2 associating factor 1 2.10177
CUL5 cullin 5 2.10177
MIR938 microRNA 938 2.10177
MIR604 microRNA 604 2.10177
LOC100132078 uncharacterized LOC100132078 2.10038
PRPSAP2 phosphoribosyl pyrophosphate synthetase-associated protein 2 2.10038
GUCY1A2 guanylate cyclase 1, soluble, alpha 2 2.10038
BTG4 B-cell translocation gene 4 2.10038
FBXW10 F-box and WD repeat domain containing 10 2.10038
SLC35F2 solute carrier family 35, member F2 2.10038
HSPB2-C11ORF52 HSPB2-C11orf52 readthrough (NMD candidate) 2.10038
TVP23B trans-golgi network vesicle protein 23 homolog B (S. cerevisiae) 2.10038
GRIA4 glutamate receptor, ionotropic, AMPA 4 2.10038
SLN sarcolipin 2.10038
CWF19L2 CWF19-like 2, cell cycle control (S. pombe) 2.10038
MIR4731 microRNA 4731 2.10038
PPP2R1B protein phosphatase 2, regulatory subunit A, beta 2.10038
ELMOD1 ELMO/CED-12 domain containing 1 2.10038
C11ORF57 chromosome 11 open reading frame 57 2.10038
C11ORF53 chromosome 11 open reading frame 53 2.10038
CASP1 caspase 1, apoptosis-related cysteine peptidase 2.10038
C11ORF1 chromosome 11 open reading frame 1 2.10038
LAYN layilin 2.10038
MIR34C microRNA 34c 2.10038
RAB39A RAB39A, member RAS oncogene family 2.10038
DLAT dihydrolipoamide S-acetyltransferase 2.10038
LOC643923 uncharacterized LOC643923 2.10038
DIXDC1 DIX domain containing 1 2.10038
MIR34B microRNA 34b 2.10038
CRYAB crystallin, alpha B 2.10038
PIH1D2 PIH1 domain containing 2 2.10038
ALG9 ALG9, alpha-1,2-mannosyltransferase 2.10038
ALKBH8 alkB, alkylation repair homolog 8 (E. coli) 2.10038
C11ORF88 chromosome 11 open reading frame 88 2.10038
CDRT7 CMT1A duplicated region transcript 7 (non-protein coding) 2.10038
CARD16 caspase recruitment domain family, member 16 2.10038
HSPB2 heat shock 27kDa protein 2 2.10038
NPAT nuclear protein, ataxia-telangiectasia locus 2.09529
SVIL supervillin 2.09529
ATM ATM serine/threonine kinase 2.09529
C11ORF65 chromosome 11 open reading frame 65 2.09529
ZC3H12C zinc finger CCCH-type containing 12C 2.09529
EXPH5 exophilin 5 2.09431
PMP22 peripheral myelin protein 22 2.09431
SIK2 salt-inducible kinase 2 2.09431
C11ORF87 chromosome 11 open reading frame 87 2.09431
MIR4693 microRNA 4693 2.09431
TEKT3 tektin 3 2.09431
KDELC2 KDEL (Lys-Asp-Glu-Leu) containing 2 2.09431
MIR4491 microRNA 4491 2.09431
RDX radixin 2.09431
CCDC144CP coiled-coil domain containing 144C, pseudogene 2.09205
EPN2-AS1 EPN2 antisense RNA 1 2.09161
CDRT15L2 CMT1A duplicated region transcript 15-like 2 2.09161
ALDH3A1 aldehyde dehydrogenase 3 family, member A1 2.09161
LGALS9B lectin, galactoside-binding, soluble, 9B 2.09117
KRT16P3 keratin 16 pseudogene 3 2.09117
EPN2-IT1 EPN2 intronic transcript 1 2.09117
SLC47A2 solute carrier family 47 (multidrug and toxin extrusion), member 2 2.09117
DDX10 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 2.09073
DDI1 DNA-damage inducible 1 homolog 1 (S. cerevisiae) 2.09073
SPECC1 sperm antigen with calponin homology and coiled-coil domains 1 2.08839
ULK2 unc-51 like autophagy activating kinase 2 2.08822
LOC100287072 ribosomal protein S6 kinase, 70kDa, polypeptide 1 pseudogene 2.08806
EPN2 epsin 2 2.08806
AKAP10 A kinase (PRKA) anchor protein 10 2.08806
RNF112 ring finger protein 112 2.08781
MFAP4 microfibrillar-associated protein 4 2.08781
MAPK7 mitogen-activated protein kinase 7 2.08781
MIR1180 microRNA 1180 2.08781
B9D1 B9 protein domain 1 2.08781
SNORA59A small nucleolar RNA, H/ACA box 59A 2.08712
SLC47A1 solute carrier family 47 (multidrug and toxin extrusion), member 1 2.08712
PDGFD platelet derived growth factor D 2.08712
ALDH3A2 aldehyde dehydrogenase 3 family, member A2 2.08391
SNORD5 small nucleolar RNA, C/D box 5 2.08334
CNTN5 contactin 5 2.08021
TMEM133 transmembrane protein 133 2.08021
ARHGAP42 Rho GTPase activating protein 42 2.08021
MIR3920 microRNA 3920 2.07776
LOC101054525 progesterone receptor antisense RNA 2.07776
PGR progesterone receptor 2.07776
TRPC6 transient receptor potential cation channel, subfamily C, member 6 2.07776
DCUN1D5 DCN1, defective in cullin neddylation 1, domain containing 5 2.0752
MMP3 matrix metallopeptidase 3 2.0752
MMP8 matrix metallopeptidase 8 2.0752
WTAPP1 Wilms tumor 1 associated protein pseudogene 1 2.0752
MMP1 matrix metallopeptidase 1 2.0752
MMP12 matrix metallopeptidase 12 2.0752
ANGPTL5 angiopoietin-like 5 2.0752
MMP10 matrix metallopeptidase 10 2.0752
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1 2.0752
MMP13 matrix metallopeptidase 13 2.0752
MMP27 matrix metallopeptidase 27 2.0752
CEP126 centrosomal protein 126kDa 2.0731
YAP1 Yes-associated protein 1 2.07006
BIRC3 baculoviral IAP repeat containing 3 2.07006
BIRC2 baculoviral IAP repeat containing 2 2.07006
MMP20 matrix metallopeptidase 20 2.06989
C11ORF70 chromosome 11 open reading frame 70 2.06989
TMEM123 transmembrane protein 123 2.06989
MMP7 matrix metallopeptidase 7 2.06989
SYT10 synaptotagmin X 2.06626
SNORA40 small nucleolar RNA, H/ACA box 40 2.05129
SNORD112 small nucleolar RNA, C/D box 112 2.04693

low copy number

Symbol Name Standardized Value
REEP5 receptor accessory protein 5 -5.12655
GOLGA8A golgin A8 family, member A -5.12655
BAGE B melanoma antigen -3.61078
BAGE3 B melanoma antigen family, member 3 -3.61078
ATP7A ATPase, Cu++ transporting, alpha polypeptide -3.56449
COX7B cytochrome c oxidase subunit VIIb -3.56449
PGAM4 phosphoglycerate mutase family member 4 -3.56449
FGF16 fibroblast growth factor 16 -3.56449
LOC286083 uncharacterized LOC286083 -3.56449
MAGT1 magnesium transporter 1 -3.53061
KBTBD11 kelch repeat and BTB (POZ) domain containing 11 -3.53061
DLGAP2 discs, large (Drosophila) homolog-associated protein 2 -3.53061
MIR596 microRNA 596 -3.50611
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 -3.50611
MYOM2 myomesin 2 -3.50611
CLN8 ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) -3.50611
ERICH1-AS1 ERICH1 antisense RNA 1 -3.50611
ATRX alpha thalassemia/mental retardation syndrome X-linked -3.50611
ERICH1 glutamate-rich 1 -3.50611
MIR1233-2 microRNA 1233-2 -3.49112
LRRC37A4P leucine rich repeat containing 37, member A4, pseudogene -3.48261
GOLGA8B golgin A8 family, member B -3.46838
LOC100506990 uncharacterized LOC100506990 -3.06578
FAM86B1 family with sequence similarity 86, member B1 -3.05881
LOC729732 uncharacterized LOC729732 -3.05881
C8ORF49 chromosome 8 open reading frame 49 -3.05881
DEFB130 defensin, beta 130 -3.05881
FAM86B2 family with sequence similarity 86, member B2 -3.05881
GATA4 GATA binding protein 4 -3.05881
NEIL2 nei endonuclease VIII-like 2 (E. coli) -3.05881
ZNF705D zinc finger protein 705D -3.05196
DEFB136 defensin, beta 136 -3.05196
DEFB135 defensin, beta 135 -3.05196
LOC392196 ubiquitin specific peptidase 17-like family member 2 pseudogene -3.05196
DEFB134 defensin, beta 134 -3.05196
IKBKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta -3.04568
LOC340357 uncharacterized LOC340357 -3.03592
KIAA1456 KIAA1456 -3.03592
CTSB cathepsin B -3.03592
FAM66D family with sequence similarity 66, member D -3.03592
FAM90A25P family with sequence similarity 90, member A7 pseudogene -3.03592
LINC00681 long intergenic non-protein coding RNA 681 -3.03592
FAM90A2P family with sequence similarity 90, member A2 pseudogene -3.03592
LONRF1 LON peptidase N-terminal domain and ring finger 1 -3.03592
FDFT1 farnesyl-diphosphate farnesyltransferase 1 -3.03592
MIR3926-2 microRNA 3926-2 -3.03082
MIR3926-1 microRNA 3926-1 -3.03082
DLC1 DLC1 Rho GTPase activating protein -3.00044
C8ORF48 chromosome 8 open reading frame 48 -2.99615
NEGR1-IT1 NEGR1 intronic transcript 1 -2.97366
DEFB109P1 defensin, beta 109, pseudogene 1 -2.93929
FBXO25 F-box protein 25 -2.93416
SGCZ sarcoglycan, zeta -2.93416
OR4F21 olfactory receptor, family 4, subfamily F, member 21 -2.93416
TDRP testis development related protein -2.93416
RPL23AP53 ribosomal protein L23a pseudogene 53 -2.88947
ZNF596 zinc finger protein 596 -2.88947
CSMD1 CUB and Sushi multiple domains 1 -2.88947
LRRC37A3 leucine rich repeat containing 37, member A3 -2.87511
SNORD27 small nucleolar RNA, C/D box 27 -2.86885
WNK3 WNK lysine deficient protein kinase 3 -2.86624
PHF8 PHD finger protein 8 -2.86624
FAM120C family with sequence similarity 120C -2.86624
USP17L2 ubiquitin specific peptidase 17-like family member 2 -2.86624
USP17L7 ubiquitin specific peptidase 17-like family member 7 -2.86003
TPTE transmembrane phosphatase with tensin homology -2.86003
FAM47C family with sequence similarity 47, member C -2.85574
ARL17A ADP-ribosylation factor-like 17A -2.84936
ZNF705A zinc finger protein 705A -2.84373
FAM66A family with sequence similarity 66, member A -2.82872
DEFB4A defensin, beta 4A -2.81412
FAM90A10P putative protein FAM90A10 -2.80826
FAM90A7P putative protein FAM90A7 -2.80826
DEFB107B defensin, beta 107B -2.80826
SPAG11A sperm associated antigen 11A -2.80826
DEFB107A defensin, beta 107A -2.80439
LOC649352 ubiquitin carboxyl-terminal hydrolase 17-like protein 2-like -2.80262
DEFB105A defensin, beta 105A -2.8018
ZNF705B zinc finger protein 705B -2.79933
LOC100506422 putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 -2.79871
DEFB106A defensin, beta 106A -2.79198
SPAG11B sperm associated antigen 11B -2.79198
DEFB4B defensin, beta 4B -2.79198
DEFB104B defensin, beta 104B -2.79198
TUSC1 tumor suppressor candidate 1 -2.78941
DEFB103A defensin, beta 103A -2.78913
IZUMO3 IZUMO family member 3 -2.77409
CFHR3 complement factor H-related 3 -2.76621
CFHR1 complement factor H-related 1 -2.76621
ELAVL2 ELAV like neuron-specific RNA binding protein 2 -2.74526