SW1271 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Small Cell Lung Carcinoma Tumour (Cell Model Passports, SIDM01156)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM01156
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Genes

198 proteins associated with the cell line SW1271 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
AHCTF1 AT hook containing transcription factor 1
AKAP8 A kinase (PRKA) anchor protein 8
ANKS6 ankyrin repeat and sterile alpha motif domain containing 6
BCAS2 breast carcinoma amplified sequence 2
BCLAF1 BCL2-associated transcription factor 1
BNIP1 BCL2/adenovirus E1B 19kDa interacting protein 1
BRIX1 BRX1, biogenesis of ribosomes
CDC5L cell division cycle 5-like
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1
CENPP centromere protein P
CLTB clathrin, light chain B
CMSS1 cms1 ribosomal small subunit homolog (yeast)
CNST consortin, connexin sorting protein
COX20 COX20 cytochrome c oxidase assembly factor
COX7A2 cytochrome c oxidase subunit VIIa polypeptide 2 (liver)
CRNKL1 crooked neck pre-mRNA splicing factor 1
CTNNBL1 catenin, beta like 1
CWF19L2 CWF19-like 2, cell cycle control (S. pombe)
DDX10 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
DDX27 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15
DIMT1 DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)
DKC1 dyskeratosis congenita 1, dyskerin
DMD dystrophin
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6
EBNA1BP2 EBNA1 binding protein 2
EFTUD2 elongation factor Tu GTP binding domain containing 2
EMG1 EMG1 N1-specific pseudouridine methyltransferase
ENDOG endonuclease G
EPN3 epsin 3
FAF2 Fas associated factor family member 2
FUBP3 far upstream element (FUSE) binding protein 3
GHDC GH3 domain containing
HEATR1 HEAT repeat containing 1
HMG20A high mobility group 20A
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H)
HNRNPL heterogeneous nuclear ribonucleoprotein L
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
IDH3A isocitrate dehydrogenase 3 (NAD+) alpha
IDH3B isocitrate dehydrogenase 3 (NAD+) beta
JCAD junctional cadherin 5 associated
KIF20B kinesin family member 20B
KIF22 kinesin family member 22
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast)
KRT9 keratin 9, type I
LINC00176 long intergenic non-protein coding RNA 176
LOC101929355 uncharacterized protein C17orf105-like
LOC105373020 uncharacterized LOC105373020
LRRC7 leucine rich repeat containing 7
MATR3 matrin 3
MT-CO2 cytochrome c oxidase subunit II
NDUFA4 NDUFA4, mitochondrial complex associated
NFRKB nuclear factor related to kappaB binding protein
NIP7 NIP7, nucleolar pre-rRNA processing protein
NOL11 nucleolar protein 11
NOL7 nucleolar protein 7, 27kDa
NOP2 NOP2 nucleolar protein
NOP56 NOP56 ribonucleoprotein
NOP58 NOP58 ribonucleoprotein
OCIAD1 OCIA domain containing 1
POLR3E polymerase (RNA) III (DNA directed) polypeptide E (80kD)
PRC1 protein regulator of cytokinesis 1
PRPF19 pre-mRNA processing factor 19
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
PRPF4B pre-mRNA processing factor 4B
PRPF6 pre-mRNA processing factor 6
PTBP1 polypyrimidine tract binding protein 1
PWP1 PWP1 homolog (S. cerevisiae)
RAB5A RAB5A, member RAS oncogene family
RACGAP1 Rac GTPase activating protein 1
RALY RALY heterogeneous nuclear ribonucleoprotein
RALYL RALY RNA binding protein-like
RDH14 retinol dehydrogenase 14 (all-trans/9-cis/11-cis)
REXO4 REX4, RNA exonuclease 4 homolog (S. cerevisiae)
RRP8 ribosomal RNA processing 8, methyltransferase, homolog (yeast)
RRP9 ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)
RRS1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
RSF1 remodeling and spacing factor 1
SAFB2 scaffold attachment factor B2
SCCPDH saccharopine dehydrogenase (putative)
SF3B6 splicing factor 3b, subunit 6, 14kDa
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5)
SNRNP40 small nuclear ribonucleoprotein 40kDa (U5)
SRSF6 serine/arginine-rich splicing factor 6
SRSF7 serine/arginine-rich splicing factor 7
SVIP small VCP/p97-interacting protein
TADA1 transcriptional adaptor 1
TIMM10B translocase of inner mitochondrial membrane 10 homolog B (yeast)
TIMM22 translocase of inner mitochondrial membrane 22 homolog (yeast)
TMEM123 transmembrane protein 123
TRA2A transformer 2 alpha homolog (Drosophila)
U2SURP U2 snRNP-associated SURP domain containing
UBAC2 UBA domain containing 2
WDR12 WD repeat domain 12
WDR43 WD repeat domain 43
YARS2 tyrosyl-tRNA synthetase 2, mitochondrial
ZC3H14 zinc finger CCCH-type containing 14
ZFR zinc finger RNA binding protein

Symbol Name
ABCB7 ATP-binding cassette, sub-family B (MDR/TAP), member 7
ABCD3 ATP-binding cassette, sub-family D (ALD), member 3
ABLIM1 actin binding LIM protein 1
ACTA2 actin, alpha 2, smooth muscle, aorta
AGAP3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
ANKRD30B ankyrin repeat domain 30B
ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
APPL2 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
ARFGAP2 ADP-ribosylation factor GTPase activating protein 2
ARID1B AT rich interactive domain 1B (SWI1-like)
ARL6IP4 ADP-ribosylation factor-like 6 interacting protein 4
ASF1A anti-silencing function 1A histone chaperone
ATF7IP activating transcription factor 7 interacting protein
ATP6V1A ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A
ATP6V1B2 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2
ATP6V1E1 ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1
BAG1 BCL2-associated athanogene
BDH2 3-hydroxybutyrate dehydrogenase, type 2
BROX BRO1 domain and CAAX motif containing
CAMSAP2 calmodulin regulated spectrin-associated protein family, member 2
CCDC93 coiled-coil domain containing 93
CDK5R2 cyclin-dependent kinase 5, regulatory subunit 2 (p39)
CFAP36 cilia and flagella associated protein 36
CHURC1 churchill domain containing 1
CIAPIN1 cytokine induced apoptosis inhibitor 1
CLCN6 chloride channel, voltage-sensitive 6
CNPY4 canopy FGF signaling regulator 4
COQ6 coenzyme Q6 monooxygenase
CORO7 coronin 7
CRELD2 cysteine-rich with EGF-like domains 2
CRIP2 cysteine-rich protein 2
DAP death-associated protein
DBR1 debranching RNA lariats 1
DOCK2 dedicator of cytokinesis 2
DPP7 dipeptidyl-peptidase 7
ELMOD2 ELMO/CED-12 domain containing 2
ENAH enabled homolog (Drosophila)
FOSL2 FOS-like antigen 2
GCFC2 GC-rich sequence DNA-binding factor 2
GMPPA GDP-mannose pyrophosphorylase A
GPN1 GPN-loop GTPase 1
GPSM1 G-protein signaling modulator 1
GPT2 glutamic pyruvate transaminase (alanine aminotransferase) 2
GTF2A2 general transcription factor IIA, 2, 12kDa
GUK1 guanylate kinase 1
HOXC10 homeobox C10
IFT122 intraflagellar transport 122
IMPA1 inositol(myo)-1(or 4)-monophosphatase 1
IRF3 interferon regulatory factor 3
ISOC2 isochorismatase domain containing 2
KIF13A kinesin family member 13A
KRT80 keratin 80, type II
LAGE3 L antigen family, member 3
LIG1 ligase I, DNA, ATP-dependent
MTAP methylthioadenosine phosphorylase
MVD mevalonate (diphospho) decarboxylase
MZT2B mitotic spindle organizing protein 2B
NIT1 nitrilase 1
NKPD1 NTPase, KAP family P-loop domain containing 1
OGFOD1 2-oxoglutarate and iron-dependent oxygenase domain containing 1
OSBP2 oxysterol binding protein 2
OSBPL2 oxysterol binding protein-like 2
PBK PDZ binding kinase
PDCL phosducin-like
PDZD8 PDZ domain containing 8
PIK3C3 phosphatidylinositol 3-kinase, catalytic subunit type 3
PPM1A protein phosphatase, Mg2+/Mn2+ dependent, 1A
PPP1R14B protein phosphatase 1, regulatory (inhibitor) subunit 14B
PROSER2 proline and serine rich 2
PTPRC protein tyrosine phosphatase, receptor type, C
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1
RABL6 RAB, member RAS oncogene family-like 6
RBM33 RNA binding motif protein 33
RBX1 ring-box 1, E3 ubiquitin protein ligase
RNA5SP422 RNA, 5S ribosomal pseudogene 422
RNF138 ring finger protein 138, E3 ubiquitin protein ligase
SERF2 small EDRK-rich factor 2
SH3BGRL SH3 domain binding glutamate-rich protein like
SLFN11 schlafen family member 11
SMG9 SMG9 nonsense mediated mRNA decay factor
SORBS3 sorbin and SH3 domain containing 3
SUPT4H1 suppressor of Ty 4 homolog 1 (S. cerevisiae)
SZRD1 SUZ RNA binding domain containing 1
TAB1 TGF-beta activated kinase 1/MAP3K7 binding protein 1
TBC1D9B TBC1 domain family, member 9B (with GRAM domain)
TP53RK TP53 regulating kinase
TPRN taperin
TRIM21 tripartite motif containing 21
TRIM3 tripartite motif containing 3
TRIM33 tripartite motif containing 33
TSEN34 TSEN34 tRNA splicing endonuclease subunit
TSNAX translin-associated factor X
UBE2R2 ubiquitin-conjugating enzyme E2R 2
VPS26B vacuolar protein sorting 26 homolog B (S. pombe)
ZBTB38 zinc finger and BTB domain containing 38
ZNF217 zinc finger protein 217
ZNF385A zinc finger protein 385A
ZNF687 zinc finger protein 687