SW13 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00814
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Genes

197 proteins associated with the cell line SW13 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
AAAS achalasia, adrenocortical insufficiency, alacrimia
AATF apoptosis antagonizing transcription factor
BMS1 BMS1 ribosome biogenesis factor
BOP1 block of proliferation 1
C1D C1D nuclear receptor corepressor
CEBPZ CCAAT/enhancer binding protein (C/EBP), zeta
CELF2 CUGBP, Elav-like family member 2
DCAF13 DDB1 and CUL4 associated factor 13
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
DKC1 dyskeratosis congenita 1, dyskerin
DNTTIP2 deoxynucleotidyltransferase, terminal, interacting protein 2
EFTUD2 elongation factor Tu GTP binding domain containing 2
ELAVL1 ELAV like RNA binding protein 1
EMG1 EMG1 N1-specific pseudouridine methyltransferase
ERH enhancer of rudimentary homolog (Drosophila)
EXOSC1 exosome component 1
EXOSC2 exosome component 2
EXOSC5 exosome component 5
EXOSC6 exosome component 6
FBL fibrillarin
FTSJ3 FtsJ homolog 3 (E. coli)
FYTTD1 forty-two-three domain containing 1
GAR1 GAR1 ribonucleoprotein
HEATR1 HEAT repeat containing 1
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1
HNRNPL heterogeneous nuclear ribonucleoprotein L
HNRNPM heterogeneous nuclear ribonucleoprotein M
HNRNPR heterogeneous nuclear ribonucleoprotein R
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
ILF2 interleukin enhancer binding factor 2
ILF3 interleukin enhancer binding factor 3, 90kDa
IMP3 IMP3, U3 small nucleolar ribonucleoprotein
IMP4 IMP4, U3 small nucleolar ribonucleoprotein
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1
KRI1 KRI1 homolog (S. cerevisiae)
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast)
MAK16 MAK16 homolog (S. cerevisiae)
MATR3 matrin 3
MBD1 methyl-CpG binding domain protein 1
MESTP1 mesoderm specific transcript pseudogene 1
MOGS mannosyl-oligosaccharide glucosidase
MPHOSPH10 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
NAT10 N-acetyltransferase 10 (GCN5-related)
NEDE nephropathy, progressive, with deafness
NGDN neuroguidin, EIF4E binding protein
NHP2 NHP2 ribonucleoprotein
NIP7 NIP7, nucleolar pre-rRNA processing protein
NOC2L nucleolar complex associated 2 homolog (S. cerevisiae)
NOC3L nucleolar complex associated 3 homolog (S. cerevisiae)
NOC4L nucleolar complex associated 4 homolog (S. cerevisiae)
NOL10 nucleolar protein 10
NOL11 nucleolar protein 11
NOL6 nucleolar protein 6 (RNA-associated)
NOLC1 nucleolar and coiled-body phosphoprotein 1
NONO non-POU domain containing, octamer-binding
NOP10 NOP10 ribonucleoprotein
NOP56 NOP56 ribonucleoprotein
NOP58 NOP58 ribonucleoprotein
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NUP35 nucleoporin 35kDa
NUP98 nucleoporin 98kDa
PAK1IP1 PAK1 interacting protein 1
PDCD11 programmed cell death 11
PINX1 PIN2/TERF1 interacting, telomerase inhibitor 1
PNO1 partner of NOB1 homolog (S. cerevisiae)
PPHLN1 periphilin 1
PRR3 proline rich 3
PTBP1 polypyrimidine tract binding protein 1
RALY RALY heterogeneous nuclear ribonucleoprotein
RBM12B RNA binding motif protein 12B
RBM28 RNA binding motif protein 28
RBMX RNA binding motif protein, X-linked
RCL1 RNA terminal phosphate cyclase-like 1
RRP1 ribosomal RNA processing 1
RRP15 ribosomal RNA processing 15 homolog (S. cerevisiae)
RRP1B ribosomal RNA processing 1B
RRP7A ribosomal RNA processing 7 homolog A (S. cerevisiae)
RRP9 ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)
RSL1D1 ribosomal L1 domain containing 1
SEH1L SEH1-like (S. cerevisiae)
SFPQ splicing factor proline/glutamine-rich
SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
SRSF7 serine/arginine-rich splicing factor 7
SRSF9 serine/arginine-rich splicing factor 9
TBL3 transducin (beta)-like 3
THOC6 THO complex 6
TOP1 topoisomerase (DNA) I
TRA2B transformer 2 beta homolog (Drosophila)
UTP14A UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)
UTP15 UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)
UTP18 UTP18 small subunit (SSU) processome component homolog (yeast)
UTP3 UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)
WDR12 WD repeat domain 12
WDR3 WD repeat domain 3
WDR36 WD repeat domain 36
WDR43 WD repeat domain 43
ZNF280C zinc finger protein 280C

Symbol Name
AAK1 AP2 associated kinase 1
ACAA1 acetyl-CoA acyltransferase 1
ACTA2 actin, alpha 2, smooth muscle, aorta
ACTBL2 actin, beta-like 2
ACTL6B actin-like 6B
AIF1L allograft inflammatory factor 1-like
BAIAP2L1 BAI1-associated protein 2-like 1
BRD2 bromodomain containing 2
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1
CAPZB capping protein (actin filament) muscle Z-line, beta
CCAR1 cell division cycle and apoptosis regulator 1
CCDC93 coiled-coil domain containing 93
CDC42EP4 CDC42 effector protein (Rho GTPase binding) 4
CDS2 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
CLINT1 clathrin interactor 1
CPSF6 cleavage and polyadenylation specific factor 6, 68kDa
CTPS2 CTP synthase 2
DBNL drebrin-like
DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
DNM3 dynamin 3
DNPEP aspartyl aminopeptidase
DONSON downstream neighbor of SON
DPF2 D4, zinc and double PHD fingers family 2
DRG2 developmentally regulated GTP binding protein 2
DUS3L dihydrouridine synthase 3-like (S. cerevisiae)
DYNLL1P7 dynein, light chain, LC8-type 1 pseudogene 7
DYNLRB1 dynein, light chain, roadblock-type 1
ELOA elongin A
GCDH glutaryl-CoA dehydrogenase
GMIP GEM interacting protein
GMPPB GDP-mannose pyrophosphorylase B
GORASP2 golgi reassembly stacking protein 2, 55kDa
GSTM3 glutathione S-transferase mu 3 (brain)
HDGF hepatoma-derived growth factor
HELZ helicase with zinc finger
IFT88 intraflagellar transport 88
INTS1 integrator complex subunit 1
INTS12 integrator complex subunit 12
ITGB5 integrin, beta 5
KNTC1 kinetochore associated 1
KPNA1 karyopherin alpha 1 (importin alpha 5)
LRP10 low density lipoprotein receptor-related protein 10
MAZ MYC-associated zinc finger protein (purine-binding transcription factor)
MED19 mediator complex subunit 19
MED24 mediator complex subunit 24
MILR1 mast cell immunoglobulin-like receptor 1
MPI mannose phosphate isomerase
MRPS6 mitochondrial ribosomal protein S6
NAA10 N(alpha)-acetyltransferase 10, NatA catalytic subunit
NAE1 NEDD8 activating enzyme E1 subunit 1
NUDT9 nudix (nucleoside diphosphate linked moiety X)-type motif 9
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa
OSGEP O-sialoglycoprotein endopeptidase
PAPSS1 3'-phosphoadenosine 5'-phosphosulfate synthase 1
PDE12 phosphodiesterase 12
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
PKP4 plakophilin 4
PLCH1 phospholipase C, eta 1
PSMA6 proteasome (prosome, macropain) subunit, alpha type, 6
PSMB1 proteasome (prosome, macropain) subunit, beta type, 1
PSMB2 proteasome (prosome, macropain) subunit, beta type, 2
PTRHD1 peptidyl-tRNA hydrolase domain containing 1
PUF60 poly-U binding splicing factor 60KDa
RABGAP1 RAB GTPase activating protein 1
RAP2B RAP2B, member of RAS oncogene family
RBM12 RNA binding motif protein 12
SAP30BP SAP30 binding protein
SART3 squamous cell carcinoma antigen recognized by T cells 3
SCARA5 scavenger receptor class A, member 5
SCP2 sterol carrier protein 2
SDCBP syndecan binding protein (syntenin)
SEC16A SEC16 homolog A (S. cerevisiae)
SIRT1 sirtuin 1
SLC7A3 solute carrier family 7 (cationic amino acid transporter, y+ system), member 3
SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
SNCB synuclein, beta
SNX27 sorting nexin family member 27
SPATA20 spermatogenesis associated 20
SRA1 steroid receptor RNA activator 1
TEX2 testis expressed 2
TM9SF1 transmembrane 9 superfamily member 1
TMOD3 tropomodulin 3 (ubiquitous)
TOMM70 translocase of outer mitochondrial membrane 70
TPM3 tropomyosin 3
TRAPPC5 trafficking protein particle complex 5
TSSC4 tumor suppressing subtransferable candidate 4
TTC37 tetratricopeptide repeat domain 37
TUBB4A tubulin, beta 4A class IVa
UBE2H ubiquitin-conjugating enzyme E2H
UBE2Z ubiquitin-conjugating enzyme E2Z
USP48 ubiquitin specific peptidase 48
VPS4B vacuolar protein sorting 4 homolog B (S. cerevisiae)
VPS52 vacuolar protein sorting 52 homolog (S. cerevisiae)
ZC3H4 zinc finger CCCH-type containing 4
ZDHHC20 zinc finger, DHHC-type containing 20
ZFP36L1 ZFP36 ring finger protein-like 1
ZNF609 zinc finger protein 609