SW1417 Gene Set

Dataset CCLE Cell Line Gene Expression Profiles
Category transcriptomics
Type cell line
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Genes

354 genes with high or low expression in SW1417 relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
LY6G6C lymphocyte antigen 6 complex, locus G6C 3.40789
KRT74 keratin 74, type II 2.72229
TMEM198 transmembrane protein 198 2.66604
FASLG Fas ligand (TNF superfamily, member 6) 2.65493
BRS3 bombesin-like receptor 3 2.65492
PTGER2 prostaglandin E receptor 2 (subtype EP2), 53kDa 2.57605
EDAR ectodysplasin A receptor 2.5606
KRT20 keratin 20, type I 2.4996
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 2.48955
BCL2L1 BCL2-like 1 2.46997
GABRA3 gamma-aminobutyric acid (GABA) A receptor, alpha 3 2.40436
ZNRF3 zinc and ring finger 3 2.38795
DCUN1D3 DCN1, defective in cullin neddylation 1, domain containing 3 2.36093
MRGBP MRG/MORF4L binding protein 2.34963
KRTAP3-1 keratin associated protein 3-1 2.28161
DEPDC7 DEP domain containing 7 2.26484
SHH sonic hedgehog 2.26229
CPLX2 complexin 2 2.25373
CCL24 chemokine (C-C motif) ligand 24 2.25296
C15ORF62 chromosome 15 open reading frame 62 2.25279
CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like 2.21482
METTL7B methyltransferase like 7B 2.15588
LRRTM1 leucine rich repeat transmembrane neuronal 1 2.13763
GLIS3-AS1 GLIS3 antisense RNA 1 2.13763
LOC100505782 uncharacterized LOC100505782 2.13763
ASCL2 achaete-scute family bHLH transcription factor 2 2.13719
TREH trehalase (brush-border membrane glycoprotein) 2.13414
SYT7 synaptotagmin VII 2.11406
DKK4 dickkopf WNT signaling pathway inhibitor 4 2.1129
OGFR opioid growth factor receptor 2.10701
MUM1L1 melanoma associated antigen (mutated) 1-like 1 2.09732
HOXA7 homeobox A7 2.09193
TTI1 TELO2 interacting protein 1 2.08351
LY6G6D lymphocyte antigen 6 complex, locus G6D 2.05623
SP5 Sp5 transcription factor 2.05311
CYP4F8 cytochrome P450, family 4, subfamily F, polypeptide 8 2.04755
SH3TC2 SH3 domain and tetratricopeptide repeats 2 2.03082
KRT40 keratin 40, type I 2.00572
C19ORF48 chromosome 19 open reading frame 48 1.9905
GAD1 glutamate decarboxylase 1 (brain, 67kDa) 1.97355
UBE2C ubiquitin-conjugating enzyme E2C 1.9716
DDAH2 dimethylarginine dimethylaminohydrolase 2 1.96584
LSMEM1 leucine-rich single-pass membrane protein 1 1.96095
PTCH1 patched 1 1.92352
CD46 CD46 molecule, complement regulatory protein 1.92151
TMEM139 transmembrane protein 139 1.90441
CADPS Ca++-dependent secretion activator 1.90253
SUGCT succinyl-CoA:glutarate-CoA transferase 1.89758
VIP vasoactive intestinal peptide 1.89676
TMEM45B transmembrane protein 45B 1.89269
CYTH2 cytohesin 2 1.88223
MC3R melanocortin 3 receptor 1.87979
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 1.87711
CST3 cystatin C 1.87603
CHST4 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4 1.87454
APCDD1 adenomatosis polyposis coli down-regulated 1 1.87126
NAA20 N(alpha)-acetyltransferase 20, NatB catalytic subunit 1.86907
MSX2 msh homeobox 2 1.86797
CSTF1 cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa 1.86721
IFRD2 interferon-related developmental regulator 2 1.86356
LOC100652770 1.85737
NOTUM notum pectinacetylesterase homolog (Drosophila) 1.84978
NKD1 naked cuticle homolog 1 (Drosophila) 1.84952
NGFR nerve growth factor receptor 1.84743
RGSL1 regulator of G-protein signaling like 1 1.84081
DGCR5 DiGeorge syndrome critical region gene 5 (non-protein coding) 1.84004
CERS6 ceramide synthase 6 1.8341
RBP1 retinol binding protein 1, cellular 1.83214
MST1R macrophage stimulating 1 receptor 1.82142
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6 1.81723
KCNH8 potassium channel, voltage gated eag related subfamily H, member 8 1.81619
FAM134A family with sequence similarity 134, member A 1.80472
GPR155 G protein-coupled receptor 155 1.78399
TMEM47 transmembrane protein 47 1.77804
ARHGAP12 Rho GTPase activating protein 12 1.76946
HOXA-AS3 HOXA cluster antisense RNA 3 1.76754
KRT36 keratin 36, type I 1.76722
NKD2 naked cuticle homolog 2 (Drosophila) 1.76716
LYRM1 LYR motif containing 1 1.76683
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 1.76479
ADAMTS14 ADAM metallopeptidase with thrombospondin type 1 motif, 14 1.76326
SPTBN5 spectrin, beta, non-erythrocytic 5 1.7612
DUSP18 dual specificity phosphatase 18 1.76069
RTKN rhotekin 1.75492
KDM7A lysine (K)-specific demethylase 7A 1.75389
ABRA actin binding Rho activating protein 1.75291
NTRK2 neurotrophic tyrosine kinase, receptor, type 2 1.75148
RNF43 ring finger protein 43 1.74544
PPP1R14D protein phosphatase 1, regulatory (inhibitor) subunit 14D 1.74249
GGH gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) 1.74173
FAM122B family with sequence similarity 122B 1.7357
ACTR3C ARP3 actin-related protein 3 homolog C (yeast) 1.72566
RALY RALY heterogeneous nuclear ribonucleoprotein 1.72052
CTNNA2 catenin (cadherin-associated protein), alpha 2 1.71272
CST5 cystatin D 1.71162
EFNA4 ephrin-A4 1.71131
CLRN3 clarin 3 1.70936
HOXB2 homeobox B2 1.69475
SYS1 Sys1 golgi trafficking protein 1.6943
GYLTL1B glycosyltransferase-like 1B 1.68449
ZNF460 zinc finger protein 460 1.68304
NEBL nebulette 1.68288
NTSR1 neurotensin receptor 1 (high affinity) 1.68087
FPR3 formyl peptide receptor 3 1.67925
STMN3 stathmin-like 3 1.66161
SCN5A sodium channel, voltage gated, type V alpha subunit 1.65576
ANO1 anoctamin 1, calcium activated chloride channel 1.65491
FOXQ1 forkhead box Q1 1.65473
KLK7 kallikrein-related peptidase 7 1.65305
COL9A3 collagen, type IX, alpha 3 1.64784
AXIN2 axin 2 1.64663
GRPR gastrin-releasing peptide receptor 1.64662
GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) 1.64089
PTK7 protein tyrosine kinase 7 (inactive) 1.64002
VSNL1 visinin-like 1 1.63592
UTP14A UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast) 1.63378
REG3A regenerating islet-derived 3 alpha 1.63373
XRN2 5'-3' exoribonuclease 2 1.62132
CPXCR1 CPX chromosome region, candidate 1 1.62051
KHK ketohexokinase (fructokinase) 1.61502
GPSM2 G-protein signaling modulator 2 1.61204
FRMPD1 FERM and PDZ domain containing 1 1.60937
OXR1 oxidation resistance 1 1.60809
ACTN4 actinin, alpha 4 1.6079
ACTR5 ARP5 actin-related protein 5 homolog (yeast) 1.60708
KLK10 kallikrein-related peptidase 10 1.60597
ABHD11 abhydrolase domain containing 11 1.60004
SPNS2 spinster homolog 2 (Drosophila) 1.59129
GOLGA7B golgin A7 family, member B 1.58861
GSTP1 glutathione S-transferase pi 1 1.57657
TUSC2 tumor suppressor candidate 2 1.57585
LOC93432 1.57569
CRNKL1 crooked neck pre-mRNA splicing factor 1 1.57042
HSPBP1 HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 1.56466
CYP4F2 cytochrome P450, family 4, subfamily F, polypeptide 2 1.56132
TMEM255B transmembrane protein 255B 1.56004
TSC22D1 TSC22 domain family, member 1 1.55918
EHF ets homologous factor 1.55816
SLCO4A1 solute carrier organic anion transporter family, member 4A1 1.55696
HOXB-AS3 HOXB cluster antisense RNA 3 1.55475
PP7080 uncharacterized LOC25845 1.55415
ISM2 isthmin 2 1.5453
MYL12B myosin, light chain 12B, regulatory 1.5443
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 1.53931
IL19 interleukin 19 1.53883
LRRC75A leucine rich repeat containing 75A 1.5388
AQP4 aquaporin 4 1.53548
IL23A interleukin 23, alpha subunit p19 1.52834
ADO 2-aminoethanethiol (cysteamine) dioxygenase 1.517
ZNF628 zinc finger protein 628 1.5167
BMP4 bone morphogenetic protein 4 1.50427
DNTTIP1 deoxynucleotidyltransferase, terminal, interacting protein 1 1.50314
BCL2L15 BCL2-like 15 1.50153
CA3 carbonic anhydrase III 1.50118
ETV2 ets variant 2 1.50068
PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 1.50028
HOXB9 homeobox B9 1.49972
EHBP1 EH domain binding protein 1 1.49884
DIO3 deiodinase, iodothyronine, type III 1.49694
KRTAP4-12 keratin associated protein 4-12 1.49608
CBLN1 cerebellin 1 precursor 1.49318
FITM2 fat storage-inducing transmembrane protein 2 1.49119
PIWIL1 piwi-like RNA-mediated gene silencing 1 1.48855
WDR27 WD repeat domain 27 1.48702
SCG2 secretogranin II 1.48247
NT5DC4 5'-nucleotidase domain containing 4 1.48093
MOGAT3 monoacylglycerol O-acyltransferase 3 1.48066
CAB39L calcium binding protein 39-like 1.47995
NME6 NME/NM23 nucleoside diphosphate kinase 6 1.47733
PKD2L2 polycystic kidney disease 2-like 2 1.47696
IER5L immediate early response 5-like 1.47512
KRTAP1-1 keratin associated protein 1-1 1.47365
NAPG N-ethylmaleimide-sensitive factor attachment protein, gamma 1.47159
SLU7 SLU7 splicing factor homolog (S. cerevisiae) 1.46968
SLC35E4 solute carrier family 35, member E4 1.4676
MALT1 MALT1 paracaspase 1.46576
CLDN3 claudin 3 1.46444
CHD6 chromodomain helicase DNA binding protein 6 1.46434
PCMTD2 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 1.46417
SHF Src homology 2 domain containing F 1.46186
MROH1 maestro heat-like repeat family member 1 1.46146
OSBPL10 oxysterol binding protein-like 10 1.46068
BATF2 basic leucine zipper transcription factor, ATF-like 2 1.45558
TMCC1 transmembrane and coiled-coil domain family 1 1.45434
TTPA tocopherol (alpha) transfer protein 1.45291
KRT23 keratin 23, type I 1.44545
KLK6 kallikrein-related peptidase 6 1.44455
CDKN3 cyclin-dependent kinase inhibitor 3 1.43896
IGFL1 IGF-like family member 1 1.43544
PRAP1 proline-rich acidic protein 1 1.43157
OR2L1P olfactory receptor, family 2, subfamily L, member 1 pseudogene 1.43157
ZNF214 zinc finger protein 214 1.42854
LOC100505474 1.42806
HDAC8 histone deacetylase 8 1.42628
VGF VGF nerve growth factor inducible 1.42562
SIGLEC6 sialic acid binding Ig-like lectin 6 1.42489
PCBP2 poly(rC) binding protein 2 1.41634
ZSCAN12P1 zinc finger and SCAN domain containing 12 pseudogene 1 1.41258
EGR4 early growth response 4 1.41245
APEX2 APEX nuclease (apurinic/apyrimidinic endonuclease) 2 1.41169
CDCP1 CUB domain containing protein 1 1.4097
ZNF473 zinc finger protein 473 1.40965
PRPF6 pre-mRNA processing factor 6 1.40919
FZD10 frizzled class receptor 10 1.40873
PRR9 proline rich 9 1.40751
TLDC2 TBC/LysM-associated domain containing 2 1.40647
ZNF557 zinc finger protein 557 1.40573
TMPRSS4 transmembrane protease, serine 4 1.40188
PIWIL4 piwi-like RNA-mediated gene silencing 4 1.39902
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 1.39708
REPIN1 replication initiator 1 1.39558
RPP25 ribonuclease P/MRP 25kDa subunit 1.39507
RTFDC1 replication termination factor 2 domain containing 1 1.39457
SUPT4H1 suppressor of Ty 4 homolog 1 (S. cerevisiae) 1.39426
YAP1 Yes-associated protein 1 1.39411
DYNLRB1 dynein, light chain, roadblock-type 1 1.39385
UNC13A unc-13 homolog A (C. elegans) 1.39329
DISP2 dispatched homolog 2 (Drosophila) 1.39211
GZF1 GDNF-inducible zinc finger protein 1 1.39006
NXT1 nuclear transport factor 2-like export factor 1 1.38839
NDFIP1 Nedd4 family interacting protein 1 1.38356
IL10 interleukin 10 1.38347
CHPF chondroitin polymerizing factor 1.38272
CD3EAP CD3e molecule, epsilon associated protein 1.38213
HOXB3 homeobox B3 1.38141
TTC26 tetratricopeptide repeat domain 26 1.37506
DCBLD2 discoidin, CUB and LCCL domain containing 2 1.36835
TESC tescalcin 1.36678
ZDHHC9 zinc finger, DHHC-type containing 9 1.36127
PRSS33 protease, serine, 33 1.36083
FAM111B family with sequence similarity 111, member B 1.3572
C2ORF40 chromosome 2 open reading frame 40 1.35707
FGF20 fibroblast growth factor 20 1.35457
RPS21 ribosomal protein S21 1.354
ZNF326 zinc finger protein 326 1.35261
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 1.35235

low expression

Symbol Name Standardized Value
SAFB2 scaffold attachment factor B2 -3.77687
USP33 ubiquitin specific peptidase 33 -3.2961
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) -3.03283
ZNF721 zinc finger protein 721 -2.45031
HOXD12 homeobox D12 -2.40999
RIT1 Ras-like without CAAX 1 -2.37794
DCTN2 dynactin 2 (p50) -2.3358
TUBE1 tubulin, epsilon 1 -2.28859
RWDD1 RWD domain containing 1 -2.26856
SNX3 sorting nexin 3 -2.17573
TRNAU1AP tRNA selenocysteine 1 associated protein 1 -2.15271
ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide -2.06153
WDR86 WD repeat domain 86 -2.06048
SEC63 SEC63 homolog (S. cerevisiae) -2.0557
P2RX4 purinergic receptor P2X, ligand gated ion channel, 4 -2.02947
PPT1 palmitoyl-protein thioesterase 1 -2.02424
BDH2 3-hydroxybutyrate dehydrogenase, type 2 -1.97405
LRRK2 leucine-rich repeat kinase 2 -1.96925
POU1F1 POU class 1 homeobox 1 -1.95517
ASH2L ash2 (absent, small, or homeotic)-like (Drosophila) -1.95453
CLN8 ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) -1.95086
CAHM colon adenocarcinoma hypermethylated (non-protein coding) -1.94968
ELP3 elongator acetyltransferase complex subunit 3 -1.94448
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -1.9336
NCAN neurocan -1.93131
TENM1 teneurin transmembrane protein 1 -1.92492
RGS13 regulator of G-protein signaling 13 -1.91933
ZNF264 zinc finger protein 264 -1.88719
CEP57L1 centrosomal protein 57kDa-like 1 -1.87782
DDHD2 DDHD domain containing 2 -1.87235
TBX15 T-box 15 -1.87067
GOLGA7 golgin A7 -1.87052
COL3A1 collagen, type III, alpha 1 -1.86951
MAGEB6 melanoma antigen family B6 -1.84368
SYCP2L synaptonemal complex protein 2-like -1.84241
RNF112 ring finger protein 112 -1.83203
LINC00290 long intergenic non-protein coding RNA 290 -1.8283
TIPRL TOR signaling pathway regulator -1.80813
SLC14A1 solute carrier family 14 (urea transporter), member 1 (Kidd blood group) -1.77897
ERLIN2 ER lipid raft associated 2 -1.74828
ZNF559 zinc finger protein 559 -1.74082
CHD3 chromodomain helicase DNA binding protein 3 -1.73002
PDILT protein disulfide isomerase-like, testis expressed -1.72931
SGTB small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta -1.72737
CDH19 cadherin 19, type 2 -1.72336
DOK6 docking protein 6 -1.71053
ATOH7 atonal homolog 7 (Drosophila) -1.70703
DISP1 dispatched homolog 1 (Drosophila) -1.70544
TRBV7-3 T cell receptor beta variable 7-3 -1.70458
COL28A1 collagen, type XXVIII, alpha 1 -1.70167
PPM1K protein phosphatase, Mg2+/Mn2+ dependent, 1K -1.69816
LINC01565 long intergenic non-protein coding RNA 1565 -1.69693
GTF2E2 general transcription factor IIE, polypeptide 2, beta 34kDa -1.69568
ZNF419 zinc finger protein 419 -1.68712
SGCE sarcoglycan, epsilon -1.68601
AHCYL1 adenosylhomocysteinase-like 1 -1.68541
LOC100505498 uncharacterized LOC100505498 -1.68185
TCF24 transcription factor 24 -1.67753
TP53I13 tumor protein p53 inducible protein 13 -1.67119
DPEP3 dipeptidase 3 -1.66429
ZNF14 zinc finger protein 14 -1.66128
GPC5 glypican 5 -1.65488
TRAV13-2 T cell receptor alpha variable 13-2 -1.65468
CSN1S1 casein alpha s1 -1.64446
MAK16 MAK16 homolog (S. cerevisiae) -1.64416
RGS2 regulator of G-protein signaling 2 -1.64278
GRIK1 glutamate receptor, ionotropic, kainate 1 -1.63782
FAM19A4 family with sequence similarity 19 (chemokine (C-C motif)-like), member A4 -1.60757
OR7D2 olfactory receptor, family 7, subfamily D, member 2 -1.60004
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -1.599
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -1.59645
CPN2 carboxypeptidase N, polypeptide 2 -1.59031
ATP6V1E2 ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2 -1.57784
TSPYL4 TSPY-like 4 -1.57611
ATG10 autophagy related 10 -1.57603
WDR63 WD repeat domain 63 -1.57186
LOC100505878 uncharacterized LOC100505878 -1.57164
SACS-AS1 SACS antisense RNA 1 -1.57036
ABCA11P ATP-binding cassette, sub-family A (ABC1), member 11, pseudogene -1.57002
ZNF426 zinc finger protein 426 -1.56986
SLC17A8 solute carrier family 17 (vesicular glutamate transporter), member 8 -1.56924
ENTHD1 ENTH domain containing 1 -1.56658
CDH13 cadherin 13 -1.56148
FCN2 ficolin (collagen/fibrinogen domain containing lectin) 2 -1.55701
GSX2 GS homeobox 2 -1.55673
MGME1 mitochondrial genome maintenance exonuclease 1 -1.55327
MAP7D1 MAP7 domain containing 1 -1.55222
SLC2A4 solute carrier family 2 (facilitated glucose transporter), member 4 -1.55101
ZUFSP zinc finger with UFM1-specific peptidase domain -1.54843
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) -1.54327
TMCO3 transmembrane and coiled-coil domains 3 -1.54101
FOXP1 forkhead box P1 -1.53173
SLC30A4 solute carrier family 30 (zinc transporter), member 4 -1.52796
MRGPRX1 MAS-related GPR, member X1 -1.52163
SGSM2 small G protein signaling modulator 2 -1.52145
HDGFRP3 hepatoma-derived growth factor, related protein 3 -1.51626
ZNF395 zinc finger protein 395 -1.51575
TNFAIP8 tumor necrosis factor, alpha-induced protein 8 -1.51497
IRF2BPL interferon regulatory factor 2 binding protein-like -1.51388
PLCL1 phospholipase C-like 1 -1.51282
HSPA4L heat shock 70kDa protein 4-like -1.51101
NFIB nuclear factor I/B -1.50329
PRKACB protein kinase, cAMP-dependent, catalytic, beta -1.50292
C1ORF228 chromosome 1 open reading frame 228 -1.50223
IGFBP5 insulin-like growth factor binding protein 5 -1.49774
VAT1 vesicle amine transport 1 -1.48451
FGF7 fibroblast growth factor 7 -1.48073
RRN3P3 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 3 -1.47956
SRSF4 serine/arginine-rich splicing factor 4 -1.47667
CDO1 cysteine dioxygenase type 1 -1.47527
C5ORF15 chromosome 5 open reading frame 15 -1.47252
CHIC2 cysteine-rich hydrophobic domain 2 -1.46669
C16ORF62 chromosome 16 open reading frame 62 -1.46606
LSM1 LSM1, U6 small nuclear RNA associated -1.45967
FBXL13 F-box and leucine-rich repeat protein 13 -1.45823
FAM73A family with sequence similarity 73, member A -1.45802
TRAF3IP2-AS1 TRAF3IP2 antisense RNA 1 -1.45638
TTC25 tetratricopeptide repeat domain 25 -1.45465