SW1463 Gene Set

Dataset CCLE Cell Line Gene CNV Profiles
Category genomics
Type cell line
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Genes

505 genes with high or low copy number in SW1463 relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
FMO5 flavin containing monooxygenase 5 3.2803
OCA2 oculocutaneous albinism II 3.2803
LEPROT leptin receptor overlapping transcript 3.2803
SMAD5 SMAD family member 5 3.2803
LOC642426 uncharacterized LOC642426 3.2803
OR4F13P olfactory receptor, family 4, subfamily F, member 13 pseudogene 2.90716
LINC00507 long intergenic non-protein coding RNA 507 2.90264
LEPR leptin receptor 2.79748
ASTN2 astrotactin 2 2.79596
CYP4F12 cytochrome P450, family 4, subfamily F, polypeptide 12 2.61423
ZNF883 zinc finger protein 883 2.44834
LINC01194 long intergenic non-protein coding RNA 1194 2.31166
KCNK2 potassium channel, two pore domain subfamily K, member 2 2.25323
DOCK2 dedicator of cytokinesis 2 2.21096
FAM196B family with sequence similarity 196, member B 2.2108
NBPF11 neuroblastoma breakpoint family, member 11 2.18366
RAF1 Raf-1 proto-oncogene, serine/threonine kinase 2.17521
QSOX2 quiescin Q6 sulfhydryl oxidase 2 2.13769
DKFZP434A062 uncharacterized LOC26102 2.13724
GPSM1 G-protein signaling modulator 1 2.13724
KLF5 Kruppel-like factor 5 (intestinal) 2.08641
FBXW8 F-box and WD repeat domain containing 8 2.08554
MAPK10 mitogen-activated protein kinase 10 2.08496
USP20 ubiquitin specific peptidase 20 2.07724
SPRYD3 SPRY domain containing 3 2.07383
THAP4 THAP domain containing 4 2.02812
ATG4B autophagy related 4B, cysteine peptidase 2.02564
DTYMK deoxythymidylate kinase (thymidylate kinase) 2.02564
MGC27382 uncharacterized MGC27382 2.0242
GRIP1 glutamate receptor interacting protein 1 2.00687
SYK spleen tyrosine kinase 1.99127
GPC6 glypican 6 1.9327
DLG2 discs, large homolog 2 (Drosophila) 1.92505
SPATA6 spermatogenesis associated 6 1.92505
TSNAX-DISC1 TSNAX-DISC1 readthrough (NMD candidate) 1.91842
DISC1 disrupted in schizophrenia 1 1.91836
ING5 inhibitor of growth family, member 5 1.89639
MARC2 mitochondrial amidoxime reducing component 2 1.84343
NUDT15 nudix (nucleoside diphosphate linked moiety X)-type motif 15 1.83819
SUCLA2 succinate-CoA ligase, ADP-forming, beta subunit 1.83818
ITM2B integral membrane protein 2B 1.83758
LINC00441 long intergenic non-protein coding RNA 441 1.83757
SLC4A4 solute carrier family 4 (sodium bicarbonate cotransporter), member 4 1.83343
SIAH3 siah E3 ubiquitin protein ligase family member 3 1.82103
ERICH6B glutamate-rich 6B 1.82081
SPERT spermatid associated 1.8208
LINC00563 long intergenic non-protein coding RNA 563 1.82043
LCP1 lymphocyte cytosolic protein 1 (L-plastin) 1.8201
KIAA0226L KIAA0226-like 1.82002
RNU6-66P RNA, U6 small nuclear 66, pseudogene 1.81999
CPB2 carboxypeptidase B2 (plasma) 1.81989
CPB2-AS1 CPB2 antisense RNA 1 1.81989
KCTD4 potassium channel tetramerization domain containing 4 1.81972
SNORA31 small nucleolar RNA, H/ACA box 31 1.81972
TPT1 tumor protein, translationally-controlled 1 1.81972
SLC25A30 solute carrier family 25, member 30 1.81945
LINC00330 long intergenic non-protein coding RNA 330 1.81938
COG3 component of oligomeric golgi complex 3 1.81927
TPT1-AS1 TPT1 antisense RNA 1 1.81915
ZC3H13 zinc finger CCCH-type containing 13 1.81361
GTF2F2 general transcription factor IIF, polypeptide 2, 30kDa 1.8099
HTR2A 5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled 1.80878
SUGT1P3 SUGT1 pseudogene 3 1.8087
WBP4 WW domain binding protein 4 1.80857
ESD esterase D 1.8052
TTC34 tetratricopeptide repeat domain 34 1.79922
LINC00366 long intergenic non-protein coding RNA 366 1.79697
MED4 mediator complex subunit 4 1.79123
MED4-AS1 MED4 antisense RNA 1 1.79123
EBPL emopamil binding protein-like 1.79095
KPNA3 karyopherin alpha 3 (importin alpha 4) 1.79023
RCBTB1 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 1.78876
ARL11 ADP-ribosylation factor-like 11 1.78865
MTRF1 mitochondrial translational release factor 1 1.7876
MIR5006 microRNA 5006 1.78759
OR7E37P olfactory receptor, family 7, subfamily E, member 37 pseudogene 1.78758
NAA16 N(alpha)-acetyltransferase 16, NatA auxiliary subunit 1.78758
RGCC regulator of cell cycle 1.78757
VWA8-AS1 VWA8 antisense RNA 1 (head to head) 1.78749
KBTBD7 kelch repeat and BTB (POZ) domain containing 7 1.78745
VWA8 von Willebrand factor A domain containing 8 1.78744
AKAP11 A kinase (PRKA) anchor protein 11 1.78725
TNFSF11 tumor necrosis factor (ligand) superfamily, member 11 1.78721
KBTBD6 kelch repeat and BTB (POZ) domain containing 6 1.78716
NHLRC3 NHL repeat containing 3 1.78567
LINC00462 long intergenic non-protein coding RNA 462 1.78309
RCBTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 1.78251
LHFP lipoma HMGIC fusion partner 1.77877
MIR4305 microRNA 4305 1.77775
COG6 component of oligomeric golgi complex 6 1.77705
FAM216B family with sequence similarity 216, member B 1.77411
LOC541473 FK506 binding protein 6, 36kDa pseudogene 1.77405
LACC1 laccase (multicopper oxidoreductase) domain containing 1 1.7739
CCDC122 coiled-coil domain containing 122 1.77385
CYSLTR2 cysteinyl leukotriene receptor 2 1.77222
LINC00284 long intergenic non-protein coding RNA 284 1.77153
SMIM2-IT1 SMIM2 intronic transcript 1 1.77149
GPALPP1 GPALPP motifs containing 1 1.77148
NUFIP1 nuclear fragile X mental retardation protein interacting protein 1 1.77147
TSC22D1-AS1 TSC22D1 antisense RNA 1 1.77147
SETDB2 SET domain, bifurcated 2 1.76817
CAB39L calcium binding protein 39-like 1.76758
MLNR motilin receptor 1.76743
CDADC1 cytidine and dCMP deaminase domain containing 1 1.7666
PHF11 PHD finger protein 11 1.76534
ELF1 E74-like factor 1 (ets domain transcription factor) 1.76164
MIR320D1 microRNA 320d-1 1.75963
MIR621 microRNA 621 1.75909
SLC25A15 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 1.759
MRPS31 mitochondrial ribosomal protein S31 1.759
FREM2 FRAS1 related extracellular matrix protein 2 1.75497
PROSER1 proline and serine rich 1 1.75376
STOML3 stomatin (EPB72)-like 3 1.75352
SERP2 stress-associated endoplasmic reticulum protein family member 2 1.75334
TSC22D1 TSC22 domain family, member 1 1.75314
RNU6-64P RNA, U6 small nuclear 64, pseudogene 1.7518
LINC00548 long intergenic non-protein coding RNA 548 1.74914
LINC00332 long intergenic non-protein coding RNA 332 1.74914
FNDC3A fibronectin type III domain containing 3A 1.74864
CTAGE10P CTAGE family, member 10, pseudogene 1.74649
MIR5007 microRNA 5007 1.74151
DGKH diacylglycerol kinase, eta 1.74067
ENOX1 ecto-NOX disulfide-thiol exchanger 1 1.73894
LPAR6 lysophosphatidic acid receptor 6 1.73801
CCDC70 coiled-coil domain containing 70 1.73414
LINC00282 long intergenic non-protein coding RNA 282 1.73409
DHRS12 dehydrogenase/reductase (SDR family) member 12 1.73396
WDFY2 WD repeat and FYVE domain containing 2 1.73389
MIR4703 microRNA 4703 1.73384
ST13P4 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 4 1.73181
MIR1297 microRNA 1297 1.72624
TPTE2P5 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 5 1.72461
LINC00558 long intergenic non-protein coding RNA 558 1.71822
SUGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 1.71718
LECT1 leukocyte cell derived chemotaxin 1 1.71718
OLFM4 olfactomedin 4 1.71705
SPRYD7 SPRY domain containing 7 1.71646
D2HGDH D-2-hydroxyglutarate dehydrogenase 1.71346
TRPC4 transient receptor potential cation channel, subfamily C, member 4 1.71171
POSTN periostin, osteoblast specific factor 1.71162
MIR3613 microRNA 3613 1.71147
KCNRG potassium channel regulator 1.71115
TRIM13 tripartite motif containing 13 1.71095
LINC00547 long intergenic non-protein coding RNA 547 1.7078
DLEU1 deleted in lymphocytic leukemia 1 (non-protein coding) 1.70477
LINC00571 long intergenic non-protein coding RNA 571 1.70452
UFM1 ubiquitin-fold modifier 1 1.70446
MIR16-1 microRNA 16-1 1.70363
MIR15A microRNA 15a 1.70357
MIR759 microRNA 759 1.70214
PCDH8 protocadherin 8 1.70197
DLEU7 deleted in lymphocytic leukemia, 7 1.69593
DLEU7-AS1 DLEU7 antisense RNA 1 1.69582
RNASEH2B-AS1 RNASEH2B antisense RNA 1 1.69559
VPS36 vacuolar protein sorting 36 homolog (S. cerevisiae) 1.69559
CKAP2 cytoskeleton associated protein 2 1.69537
THSD1 thrombospondin, type I, domain containing 1 1.69486
HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 1.67824
FOXO1 forkhead box O1 1.67797
FAM124A family with sequence similarity 124A 1.67631
LINC00598 long intergenic non-protein coding RNA 598 1.67346
ALG11 ALG11, alpha-1,2-mannosyltransferase 1.66709
UTP14C UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast) 1.66709
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 1.65782
SERPINE3 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 1.65654
MIR5693 microRNA 5693 1.65645
EPSTI1 epithelial stromal interaction 1 (breast) 1.65308
RNU6-71P RNA, U6 small nuclear 71, pseudogene 1.6425
ATP7B ATPase, Cu++ transporting, beta polypeptide 1.63475
MRPS31P5 mitochondrial ribosomal protein S31 pseudogene 5 1.63395
DLEU2 deleted in lymphocytic leukemia 2 (non-protein coding) 1.63078
RNASEH2B ribonuclease H2, subunit B 1.63032
INTS6 integrator complex subunit 6 1.62565
GUCY1B2 guanylate cyclase 1, soluble, beta 2 (pseudogene) 1.62216
RB1 retinoblastoma 1 1.61877
GAL3ST2 galactose-3-O-sulfotransferase 2 1.61315
NEK3 NIMA-related kinase 3 1.60026
NEK5 NIMA-related kinase 5 1.60019
USP25 ubiquitin specific peptidase 25 1.59732
PRR20D proline rich 20D 1.58615
PRR20A proline rich 20A 1.58615
PRR20E proline rich 20E 1.58615
PRR20B proline rich 20B 1.58615
PRR20C proline rich 20C 1.58615
MB21D2 Mab-21 domain containing 2 1.57925
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 1.57729
MICU2 mitochondrial calcium uptake 2 1.56878
ZDHHC20 zinc finger, DHHC-type containing 20 1.56878
SKA3 spindle and kinetochore associated complex subunit 3 1.56862
SAP18 Sin3A-associated protein, 18kDa 1.56862
MRPL57 mitochondrial ribosomal protein L57 1.56839
MIPEPP3 mitochondrial intermediate peptidase pseudogene 3 1.5657
LINC00424 long intergenic non-protein coding RNA 424 1.55582
RNU6-67P RNA, U6 small nuclear 67, pseudogene 1.55395
SACS sacsin molecular chaperone 1.55149
SGCG sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein) 1.55102
FGF9 fibroblast growth factor 9 1.55074
C1QTNF9 C1q and tumor necrosis factor related protein 9 1.54865
SPATA13-AS1 SPATA13 antisense RNA 1 1.54315
MIR2276 microRNA 2276 1.54297
SPATA13 spermatogenesis associated 13 1.54275
EXOSC8 exosome component 8 1.54132
ALG5 ALG5, dolichyl-phosphate beta-glucosyltransferase 1.54126
AMER2 APC membrane recruitment protein 2 1.54046
LATS2 large tumor suppressor kinase 2 1.53639
CSNK1A1L casein kinase 1, alpha 1-like 1.53495
SUPT20H suppressor of Ty 20 homolog (S. cerevisiae) 1.53452
LINC00327 long intergenic non-protein coding RNA 327 1.52904
BASP1P1 brain abundant, membrane attached signal protein 1 pseudogene 1 1.52898
XPO4 exportin 4 1.52775
TNFRSF19 tumor necrosis factor receptor superfamily, member 19 1.52523
ATP12A ATPase, H+/K+ transporting, nongastric, alpha polypeptide 1.52293
SHISA2 shisa family member 2 1.52197
RNF6 ring finger protein (C3H2C3 type) 6 1.52149
PABPC3 poly(A) binding protein, cytoplasmic 3 1.52059
LINC00550 long intergenic non-protein coding RNA 550 1.52048
CDK8 cyclin-dependent kinase 8 1.52015
C1QTNF9B C1q and tumor necrosis factor related protein 9B 1.51643
C1QTNF9B-AS1 C1QTNF9B antisense RNA 1 1.51643
RFXAP regulatory factor X-associated protein 1.51592
MIPEP mitochondrial intermediate peptidase 1.51559
ATXN8OS ATXN8 opposite strand (non-protein coding) 1.51437
TPTE2P1 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1 1.51412
N6AMT2 N-6 adenine-specific DNA methyltransferase 2 (putative) 1.50295
MIR4499 microRNA 4499 1.50207
PCDH17 protocadherin 17 1.5001
SLC46A3 solute carrier family 46, member 3 1.49902
MAB21L1 mab-21-like 1 (C. elegans) 1.49873
PCDH9-AS2 PCDH9 antisense RNA 2 1.49837
CCNA1 cyclin A1 1.49813
PCDH9-AS3 PCDH9 antisense RNA 3 1.49714
SERTM1 serine-rich and transmembrane domain containing 1 1.49677
PCDH20 protocadherin 20 1.496
SMAD9 SMAD family member 9 1.49259
CENPJ centromere protein J 1.48933
LINC00348 long intergenic non-protein coding RNA 348 1.48874
MTMR6 myotubularin related protein 6 1.48845
DIAPH3-AS1 DIAPH3 antisense RNA 1 1.48371
DIAPH3-AS2 DIAPH3 antisense RNA 2 1.48357
DIAPH3 diaphanous-related formin 3 1.48338
GTF3A general transcription factor IIIA 1.48316
MTIF3 mitochondrial translational initiation factor 3 1.48316
WASF3 WAS protein family, member 3 1.48179
GPR12 G protein-coupled receptor 12 1.48131
GSX1 GS homeobox 1 1.4807
LNX2 ligand of numb-protein X 2 1.48062
POLR1D polymerase (RNA) I polypeptide D, 16kDa 1.48043
NBEA neurobeachin 1.47904
TDRD3 tudor domain containing 3 1.47797
MIR3169 microRNA 3169 1.47774
LINC00457 long intergenic non-protein coding RNA 457 1.47706
POMP proteasome maturation protein 1.4752
SOHLH2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 1.47486
SPG20-AS1 SPG20 antisense RNA 1 1.47471
SPG20 spastic paraplegia 20 (Troyer syndrome) 1.47431
DCLK1 doublecortin-like kinase 1 1.47424
NUPL1 nucleoporin like 1 1.47061
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 1.47046
RNF17 ring finger protein 17 1.46818
GJB6 gap junction protein, beta 6, 30kDa 1.46686
TPTE2P6 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 6 1.46678
IL17D interleukin 17D 1.46628
IFT88 intraflagellar transport 88 1.46579
CDX2 caudal type homeobox 2 1.46484
RASL11A RAS-like, family 11, member A 1.46468
RPL21 ribosomal protein L21 1.46451
SNORD102 small nucleolar RNA, C/D box 102 1.46451
SNORA27 small nucleolar RNA, H/ACA box 27 1.46451
ZAR1L zygote arrest 1-like 1.46296
MTUS2-AS1 MTUS2 antisense RNA 1 1.46257
N4BP2L1 NEDD4 binding protein 2-like 1 1.45898
RFC3 replication factor C (activator 1) 3, 38kDa 1.45896
MINOS1P1 mitochondrial inner membrane organizing system 1 pseudogene 1 1.45859
N4BP2L2-IT2 N4BPL2 intronic transcript 2 1.45859
N4BP2L2 NEDD4 binding protein 2-like 2 1.45836
CRYL1 crystallin, lambda 1 1.45745
UBL3 ubiquitin-like 3 1.45471
PDX1 pancreatic and duodenal homeobox 1 1.45295
KLHL1 kelch-like family member 1 1.45256
PAN3-AS1 PAN3 antisense RNA 1 1.4525
URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase 1.45196
PAN3 PAN3 poly(A) specific ribonuclease subunit 1.45158
FLT1 fms-related tyrosine kinase 1 1.45137
GJA3 gap junction protein, alpha 3, 46kDa 1.44958
GJB2 gap junction protein, beta 2, 26kDa 1.44954
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 1.44897
MEDAG mesenteric estrogen-dependent adipogenesis 1.44289
USP12 ubiquitin specific peptidase 12 1.44271
BRCA2 breast cancer 2, early onset 1.44058
TEX26-AS1 TEX26 antisense RNA 1 1.44052
LINC00398 long intergenic non-protein coding RNA 398 1.44017
PDS5B PDS5 cohesin associated factor B 1.43656
LINC00544 long intergenic non-protein coding RNA 544 1.43388
LINC00297 long intergenic non-protein coding RNA 297 1.43306
KL klotho 1.43057
KATNAL1 katanin p60 subunit A-like 1 1.43032
RNU6-76P RNA, U6 small nuclear 76, pseudogene 1.43031
STARD13-AS STARD13 antisense RNA 1.42987
LINC00423 long intergenic non-protein coding RNA 423 1.4292
ATP5EP2 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit pseudogene 2 1.42609
HSPH1 heat shock 105kDa/110kDa protein 1 1.42582
LINC00421 long intergenic non-protein coding RNA 421 1.42561
ANKRD26P3 ankyrin repeat domain 26 pseudogene 3 1.42547
RNU6-78P RNA, U6 small nuclear 78, pseudogene 1.42083
RXFP2 relaxin/insulin-like family peptide receptor 2 1.42009
LINC00426 long intergenic non-protein coding RNA 426 1.4163
PSPC1 paraspeckle component 1 1.41429
HMGB1 high mobility group box 1 1.41377
USPL1 ubiquitin specific peptidase like 1 1.41303
CCDC169-SOHLH2 CCDC169-SOHLH2 readthrough 1.40979
CCDC169 coiled-coil domain containing 169 1.40979
MIR3665 microRNA 3665 1.40861
MTUS2 microtubule associated tumor suppressor candidate 2 1.40816
IRG1 immunoresponsive 1 homolog (mouse) 1.40794
BTF3P11 basic transcription factor 3 pseudogene 11 1.40786
SCEL sciellin 1.40196
MPHOSPH8 M-phase phosphoprotein 8 1.39796
MZT1 mitotic spindle organizing protein 1 1.39692
LINC00446 long intergenic non-protein coding RNA 446 1.39515
UCHL3 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) 1.39217
ZMYM2 zinc finger, MYM-type 2 1.39211
FLT3 fms-related tyrosine kinase 3 1.39193
ALOX5AP arachidonate 5-lipoxygenase-activating protein 1.39129
FBXL3 F-box and leucine-rich repeat protein 3 1.38863
CLN5 ceroid-lipofuscinosis, neuronal 5 1.3886
KCTD12 potassium channel tetramerization domain containing 12 1.38767
ZNF285 zinc finger protein 285 1.38702
LINC00347 long intergenic non-protein coding RNA 347 1.3865
LINC00381 long intergenic non-protein coding RNA 381 1.38645
LINC00331 long intergenic non-protein coding RNA 331 1.38641
SLAIN1 SLAIN motif family, member 1 1.38615
ATP8A2 ATPase, aminophospholipid transporter, class I, type 8A, member 2 1.38435
CTAGE11P CTAGE family, member 11, pseudogene 1.38382
BORA bora, aurora kinase A activator 1.38343
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease 1.38338
C18ORF25 chromosome 18 open reading frame 25 1.38136
DACH1 dachshund family transcription factor 1 1.38112
POU4F1 POU class 4 homeobox 1 1.38106
HAUS1 HAUS augmin-like complex, subunit 1 1.37914
MYCBP2-AS1 MYCBP2 antisense RNA 1 1.37886
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 1.37788
LMO7DN LMO7 downstream neighbor 1.37674
SLITRK1 SLIT and NTRK-like family, member 1 1.376
PIAS2 protein inhibitor of activated STAT, 2 1.37417
RNF219 ring finger protein 219 1.37275
RNU6-69P RNA, U6 small nuclear 69, pseudogene 1.37146
EDNRB endothelin receptor type B 1.37129
TCEB3CL2 transcription elongation factor B polypeptide 3C-like 2 1.36601
TCEB3C transcription elongation factor B polypeptide 3C (elongin A3) 1.36601
TCEB3CL transcription elongation factor B polypeptide 3C-like 1.36601
TCEB3B transcription elongation factor B polypeptide 3B (elongin A2) 1.36601
KATNAL2 katanin p60 subunit A-like 2 1.36585
OR7E156P olfactory receptor, family 7, subfamily E, member 156 pseudogene 1.36469
RNF165 ring finger protein 165 1.36226
NDFIP2-AS1 NDFIP2 antisense RNA 1 1.36214
TEX26 testis expressed 26 1.36173
RBM26-AS1 RBM26 antisense RNA 1 1.36135
TPTE2 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 1.36111
RBM26 RNA binding motif protein 26 1.35793
LMO7 LIM domain 7 1.35767
SLITRK6 SLIT and NTRK-like family, member 6 1.35429
LOXHD1 lipoxygenase homology domains 1 1.35414
STARD13 StAR-related lipid transfer (START) domain containing 13 1.35272
TBC1D4 TBC1 domain family, member 4 1.347
NDFIP2 Nedd4 family interacting protein 2 1.34379
RNU6-52P RNA, U6 small nuclear 52, pseudogene 1.34082
TUBA3C tubulin, alpha 3c 1.34079
PIBF1 progesterone immunomodulatory binding factor 1 1.34022
LINC00351 long intergenic non-protein coding RNA 351 1.33816
LINC00333 long intergenic non-protein coding RNA 333 1.33643
RNF219-AS1 RNF219 antisense RNA 1 1.33337
CFH complement factor H 1.33217
COMMD6 COMM domain containing 6 1.33212
B3GALTL beta 1,3-galactosyltransferase-like 1.328

low copy number

Symbol Name Standardized Value
CRHR1 corticotropin releasing hormone receptor 1 -3.20791
PARP4 poly (ADP-ribose) polymerase family, member 4 -2.11681
OR4S2 olfactory receptor, family 4, subfamily S, member 2 -2.06234
OR4C6 olfactory receptor, family 4, subfamily C, member 6 -2.06145
OR4P4 olfactory receptor, family 4, subfamily P, member 4 -2.05747
RAI1 retinoic acid induced 1 -2.03554
PPP6R2 protein phosphatase 6, regulatory subunit 2 -1.86837
FAM182A family with sequence similarity 182, member A -1.69995
MIR4767 microRNA 4767 -1.62322
JPH1 junctophilin 1 -1.60313
LOC145837 -1.51619
RPLP1 ribosomal protein, large, P1 -1.51619
KIF23 kinesin family member 23 -1.51602
SKOR1 SKI family transcriptional corepressor 1 -1.5012
CALML4 calmodulin-like 4 -1.50061
CLN6 ceroid-lipofuscinosis, neuronal 6, late infantile, variant -1.50061
C15ORF61 chromosome 15 open reading frame 61 -1.49935
IQCH-AS1 IQCH antisense RNA 1 -1.49935
SPESP1 sperm equatorial segment protein 1 -1.49735
ANP32A-IT1 ANP32A intronic transcript 1 -1.49726
MIR4312 microRNA 4312 -1.49726
RAB11A RAB11A, member RAS oncogene family -1.49612
FEM1B fem-1 homolog b (C. elegans) -1.49225
IGDCC3 immunoglobulin superfamily, DCC subclass, member 3 -1.49154
SNAPC5 small nuclear RNA activating complex, polypeptide 5, 19kDa -1.49005
SNORD18B small nucleolar RNA, C/D box 18B -1.48984
RPL4 ribosomal protein L4 -1.48984
SNORD18C small nucleolar RNA, C/D box 18C -1.48984
SNORD18A small nucleolar RNA, C/D box 18A -1.48984
SNORD16 small nucleolar RNA, C/D box 16 -1.48984
PARP16 poly (ADP-ribose) polymerase family, member 16 -1.48916
SCARNA14 small Cajal body-specific RNA 14 -1.48883
TIPIN TIMELESS interacting protein -1.48824
IGDCC4 immunoglobulin superfamily, DCC subclass, member 4 -1.48801
LCTL lactase-like -1.48765
MIR4511 microRNA 4511 -1.48433
DENND4A DENN/MADD domain containing 4A -1.48397
AAGAB alpha- and gamma-adaptin binding protein -1.47664
MAP2K5 mitogen-activated protein kinase kinase 5 -1.47562
EWSAT1 Ewing sarcoma associated transcript 1 -1.47381
IQCH IQ motif containing H -1.47294
GLCE glucuronic acid epimerase -1.47274
MIR4311 microRNA 4311 -1.47054
CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit -1.46843
CILP cartilage intermediate layer protein, nucleotide pyrophosphohydrolase -1.4684
DPP8 dipeptidyl-peptidase 8 -1.46381
DIS3L DIS3 like exosome 3'-5' exoribonuclease -1.46324
SMAD6 SMAD family member 6 -1.46053
SLC24A1 solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 -1.46041
NR2E3 nuclear receptor subfamily 2, group E, member 3 -1.45211
CORO2B coronin, actin binding protein, 2B -1.44924
PDCD7 programmed cell death 7 -1.44897
ANP32A acidic (leucine-rich) nuclear phosphoprotein 32 family, member A -1.44821
VWA9 von Willebrand factor A domain containing 9 -1.43818
PAQR5 progestin and adipoQ receptor family member V -1.43032
KBTBD13 kelch repeat and BTB (POZ) domain containing 13 -1.42912
UBAP1L ubiquitin associated protein 1-like -1.42912
SPG21 spastic paraplegia 21 (autosomal recessive, Mast syndrome) -1.42907
ANKDD1A ankyrin repeat and death domain containing 1A -1.42903
RASL12 RAS-like, family 12 -1.42898
SLC51B solute carrier family 51, beta subunit -1.42898
LARP6 La ribonucleoprotein domain family, member 6 -1.42351
THAP10 THAP domain containing 10 -1.42351
LINC00593 long intergenic non-protein coding RNA 593 -1.4232
ITGA11 integrin, alpha 11 -1.42069
PPIB peptidylprolyl isomerase B (cyclophilin B) -1.42032
ZWILCH zwilch kinetochore protein -1.42008
SNX22 sorting nexin 22 -1.41972
MEGF11 multiple EGF-like-domains 11 -1.41835
MAP2K1 mitogen-activated protein kinase kinase 1 -1.41773
HACD3 3-hydroxyacyl-CoA dehydratase 3 -1.41764
TLE3 transducin-like enhancer of split 3 -1.41662
MIR629 microRNA 629 -1.41662
ADPGK-AS1 ADPGK antisense RNA 1 -1.41403
PIAS1 protein inhibitor of activated STAT, 1 -1.40973
MTFMT mitochondrial methionyl-tRNA formyltransferase -1.40818
PLEKHO2 pleckstrin homology domain containing, family O member 2 -1.40751
PIF1 PIF1 5'-to-3' DNA helicase -1.40751
SENP8 SUMO/sentrin specific peptidase family member 8 -1.40469
CT62 cancer/testis antigen 62 -1.40184
GOLGA6B golgin A6 family, member B -1.39371
HIGD2B HIG1 hypoxia inducible domain family, member 2B -1.39371
MIR630 microRNA 630 -1.39371
BBS4 Bardet-Biedl syndrome 4 -1.39371
SMAD3 SMAD family member 3 -1.39016
FAM96A family with sequence similarity 96, member A -1.38842
SNX1 sorting nexin 1 -1.38804
MIR1272 microRNA 1272 -1.38783
RBPMS2 RNA binding protein with multiple splicing 2 -1.38783
NOX5 NADPH oxidase, EF-hand calcium binding domain 5 -1.38718
LRRC49 leucine rich repeat containing 49 -1.38598
HCN4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 -1.37922
NAALADL2-AS3 NAALADL2 antisense RNA 3 -1.3788
ADPGK ADP-dependent glucokinase -1.37459
KIAA0101 KIAA0101 -1.37349
TMEM202 transmembrane protein 202 -1.37279
GRAMD2 GRAM domain containing 2 -1.37236
HEXA-AS1 HEXA antisense RNA 1 -1.3721
HEXA hexosaminidase A (alpha polypeptide) -1.3721
OAZ2 ornithine decarboxylase antizyme 2 -1.36856
USP3 ubiquitin specific peptidase 3 -1.36541
C2CD4A C2 calcium-dependent domain containing 4A -1.36155
LOC100289673 phosphoglycerate mutase family member 5 pseudogene -1.35795
DAPK2 death-associated protein kinase 2 -1.35043
FBXL22 F-box and leucine-rich repeat protein 22 -1.34791
USP3-AS1 USP3 antisense RNA 1 -1.34739
REC114 REC114 meiotic recombination protein -1.34729
C2CD4B C2 calcium-dependent domain containing 4B -1.34697
CD276 CD276 molecule -1.34659
C15ORF59 chromosome 15 open reading frame 59 -1.34659
CCSER1 coiled-coil serine-rich protein 1 -1.34004
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -1.3391
LINC01023 long intergenic non-protein coding RNA 1023 -1.33861
TRIP4 thyroid hormone receptor interactor 4 -1.33781
CSNK1G1 casein kinase 1, gamma 1 -1.33739
CELF6 CUGBP, Elav-like family member 6 -1.33696
PKM pyruvate kinase, muscle -1.33674
TBC1D21 TBC1 domain family, member 21 -1.33655
LOC283731 uncharacterized LOC283731 -1.33453
ISLR2 immunoglobulin superfamily containing leucine-rich repeat 2 -1.33453
ISLR immunoglobulin superfamily containing leucine-rich repeat -1.33424
STRA6 stimulated by retinoic acid 6 -1.3342
APH1B APH1B gamma secretase subunit -1.33031
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) -1.32988
NPTN neuroplastin -1.32983
STOML1 stomatin (EPB72)-like 1 -1.3283
NEO1 neogenin 1 -1.32762
LACTB lactamase, beta -1.32727
GOLGA6A golgin A6 family, member A -1.32227
LOXL1-AS1 LOXL1 antisense RNA 1 -1.32141
LOXL1 lysyl oxidase-like 1 -1.32017