SW1573 Gene Set

Dataset GDSC Cell Line Gene Expression Profiles
Category transcriptomics
Type cell line
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Genes

251 genes with high or low expression in SW1573 relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 3.60177
DNMBP dynamin binding protein 3.46045
VPS16 vacuolar protein sorting 16 homolog (S. cerevisiae) 3.06369
NSMF NMDA receptor synaptonuclear signaling and neuronal migration factor 3.0129
TSPAN5 tetraspanin 5 3.00816
PURA purine-rich element binding protein A 3.00374
PPARD peroxisome proliferator-activated receptor delta 2.94271
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 2.89856
KIAA0754 KIAA0754 2.89455
PTPN1 protein tyrosine phosphatase, non-receptor type 1 2.84845
PHF10 PHD finger protein 10 2.83003
PDE2A phosphodiesterase 2A, cGMP-stimulated 2.82983
NRBP1 nuclear receptor binding protein 1 2.82024
GFPT2 glutamine-fructose-6-phosphate transaminase 2 2.74559
TULP3 tubby like protein 3 2.70306
CORIN corin, serine peptidase 2.63871
MID1 midline 1 2.57087
PHC2 polyhomeotic homolog 2 (Drosophila) 2.51117
FGF20 fibroblast growth factor 20 2.48851
RARB retinoic acid receptor, beta 2.47641
ADORA1 adenosine A1 receptor 2.4408
COL13A1 collagen, type XIII, alpha 1 2.42622
IPP intracisternal A particle-promoted polypeptide 2.42612
SYNJ2 synaptojanin 2 2.38123
TLL2 tolloid-like 2 2.36235
ASXL2 additional sex combs like transcriptional regulator 2 2.34466
THOP1 thimet oligopeptidase 1 2.33753
ADAM17 ADAM metallopeptidase domain 17 2.30156
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 2.25168
LIMA1 LIM domain and actin binding 1 2.2373
DUSP3 dual specificity phosphatase 3 2.20852
SLC1A5 solute carrier family 1 (neutral amino acid transporter), member 5 2.18343
EPHA4 EPH receptor A4 2.17024
BEAN1 brain expressed, associated with NEDD4, 1 2.14493
MAPK9 mitogen-activated protein kinase 9 2.1297
GNPDA1 glucosamine-6-phosphate deaminase 1 2.12653
CDC14B cell division cycle 14B 2.12533
SIK2 salt-inducible kinase 2 2.11622
TM9SF3 transmembrane 9 superfamily member 3 2.11175
DCLK1 doublecortin-like kinase 1 2.10583
BSDC1 BSD domain containing 1 2.10423
SFXN3 sideroflexin 3 2.08415
G3BP1 GTPase activating protein (SH3 domain) binding protein 1 2.08075
FAM63A family with sequence similarity 63, member A 2.05834
MACF1 microtubule-actin crosslinking factor 1 2.05038
CD160 CD160 molecule 2.04743
XPA xeroderma pigmentosum, complementation group A 2.04167
OR7E19P olfactory receptor, family 7, subfamily E, member 19 pseudogene 2.03662
TIAM1 T-cell lymphoma invasion and metastasis 1 2.02322
TRPV2 transient receptor potential cation channel, subfamily V, member 2 2.02184
SCML1 sex comb on midleg-like 1 (Drosophila) 2.01224
HS1BP3 HCLS1 binding protein 3 1.99229
MYBPH myosin binding protein H 1.97374
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 1.97266
DIMT1 DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae) 1.96778
GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) 1.95451
CDK17 cyclin-dependent kinase 17 1.95212
DSTYK dual serine/threonine and tyrosine protein kinase 1.89628
LOC257152 uncharacterized LOC257152 1.89224
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 1.88822
EIF2B4 eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa 1.88822
LRTM1 leucine-rich repeats and transmembrane domains 1 1.87958
PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit 1.86394
TSPAN14 tetraspanin 14 1.85832
FNDC4 fibronectin type III domain containing 4 1.84632
WISP1 WNT1 inducible signaling pathway protein 1 1.84334
KCMF1 potassium channel modulatory factor 1 1.83256
DAP death-associated protein 1.82883
AHI1 Abelson helper integration site 1 1.81438
UAP1L1 UDP-N-acetylglucosamine pyrophosphorylase 1 like 1 1.80306
HOXA5 homeobox A5 1.79447
UCN urocortin 1.77791
PELO pelota homolog (Drosophila) 1.77234
PRKCQ protein kinase C, theta 1.76962
IGFBP6 insulin-like growth factor binding protein 6 1.76582
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 1.75805
CRK v-crk avian sarcoma virus CT10 oncogene homolog 1.75373
LGI2 leucine-rich repeat LGI family, member 2 1.74413
VIP vasoactive intestinal peptide 1.74334
CST1 cystatin SN 1.71581
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 1.70668
ATP6V0A4 ATPase, H+ transporting, lysosomal V0 subunit a4 1.70633
SLC35D2 solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2 1.695
ADAM19 ADAM metallopeptidase domain 19 1.69273
CSNK1A1 casein kinase 1, alpha 1 1.68563
MMS19 MMS19 nucleotide excision repair homolog (S. cerevisiae) 1.68408
SPR sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase) 1.67862
FOXO3 forkhead box O3 1.67592
ADGRG2 adhesion G protein-coupled receptor G2 1.67167
PWP1 PWP1 homolog (S. cerevisiae) 1.67136
MAST4 microtubule associated serine/threonine kinase family member 4 1.6512
PNPO pyridoxamine 5'-phosphate oxidase 1.65028
ZNF432 zinc finger protein 432 1.64983
HOXB6 homeobox B6 1.6326
NTSR1 neurotensin receptor 1 (high affinity) 1.63137
MAGEB3 melanoma antigen family B3 1.6279
PRKAR2A protein kinase, cAMP-dependent, regulatory, type II, alpha 1.606
ITPKA inositol-trisphosphate 3-kinase A 1.60039
METTL9 methyltransferase like 9 1.59436
PRDM4 PR domain containing 4 1.59202
NEBL nebulette 1.59202
PTCD3 pentatricopeptide repeat domain 3 1.58863
GPN1 GPN-loop GTPase 1 1.58764
GDF2 growth differentiation factor 2 1.58578
RECQL RecQ helicase-like 1.58545
ASIC2 acid sensing (proton gated) ion channel 2 1.58297
SPTB spectrin, beta, erythrocytic 1.58119
PARP12 poly (ADP-ribose) polymerase family, member 12 1.57964
NT5M 5',3'-nucleotidase, mitochondrial 1.56023
MSH3 mutS homolog 3 1.55281
PIP5K1B phosphatidylinositol-4-phosphate 5-kinase, type I, beta 1.54893
FEZ2 fasciculation and elongation protein zeta 2 (zygin II) 1.54341
F12 coagulation factor XII (Hageman factor) 1.54018
HARS2 histidyl-tRNA synthetase 2, mitochondrial 1.52319
RPP25 ribonuclease P/MRP 25kDa subunit 1.51766
PTMS parathymosin 1.51722
GAD1 glutamate decarboxylase 1 (brain, 67kDa) 1.51497
PDLIM3 PDZ and LIM domain 3 1.50219
HOXA4 homeobox A4 1.49795
RASAL2 RAS protein activator like 2 1.48771
MMP14 matrix metallopeptidase 14 (membrane-inserted) 1.4821
TRIO trio Rho guanine nucleotide exchange factor 1.48171
ZBTB20 zinc finger and BTB domain containing 20 1.48107
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 1.46578
KRT35 keratin 35, type I 1.46176
TRIM23 tripartite motif containing 23 1.4572
INSRR insulin receptor-related receptor 1.44988
RTEL1 regulator of telomere elongation helicase 1 1.44957
CST4 cystatin S 1.44795
ELK3 ELK3, ETS-domain protein (SRF accessory protein 2) 1.4474
CNNM1 cyclin and CBS domain divalent metal cation transport mediator 1 1.44692
ATG12 autophagy related 12 1.44411
ZNF638 zinc finger protein 638 1.44395
CLK4 CDC-like kinase 4 1.43879
FBXO11 F-box protein 11 1.4379
IFT22 intraflagellar transport 22 1.43511
RPL26L1 ribosomal protein L26-like 1 1.4344
SNX9 sorting nexin 9 1.43403
SLCO1B1 solute carrier organic anion transporter family, member 1B1 1.42908
NAV3 neuron navigator 3 1.42825
ATM ATM serine/threonine kinase 1.42512
NR2F2 nuclear receptor subfamily 2, group F, member 2 1.42405
ASB4 ankyrin repeat and SOCS box containing 4 1.42333
ZNF175 zinc finger protein 175 1.42036

low expression

Symbol Name Standardized Value
NIPSNAP1 nipsnap homolog 1 (C. elegans) -3.53725
MYH14 myosin, heavy chain 14, non-muscle -3.3662
POSTN periostin, osteoblast specific factor -3.08285
ME2 malic enzyme 2, NAD(+)-dependent, mitochondrial -2.78341
MC4R melanocortin 4 receptor -2.50696
PUS7L pseudouridylate synthase 7 homolog (S. cerevisiae)-like -2.43913
FMOD fibromodulin -2.41372
PDZRN4 PDZ domain containing ring finger 4 -2.32389
YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta -2.32045
KCNJ14 potassium channel, inwardly rectifying subfamily J, member 14 -2.30476
FBXL12 F-box and leucine-rich repeat protein 12 -2.21929
DIAPH3 diaphanous-related formin 3 -2.20264
INPP4A inositol polyphosphate-4-phosphatase, type I, 107kDa -2.18522
MEX3C mex-3 RNA binding family member C -2.16899
TM6SF1 transmembrane 6 superfamily member 1 -2.16829
ZNF274 zinc finger protein 274 -2.15962
CD81 CD81 molecule -2.12711
NIPAL3 NIPA-like domain containing 3 -2.11295
SPTBN2 spectrin, beta, non-erythrocytic 2 -2.09266
MED24 mediator complex subunit 24 -2.06881
PTPN6 protein tyrosine phosphatase, non-receptor type 6 -1.9856
DHX16 DEAH (Asp-Glu-Ala-His) box polypeptide 16 -1.96946
CYP2J2 cytochrome P450, family 2, subfamily J, polypeptide 2 -1.96837
SMAD4 SMAD family member 4 -1.94334
CASC1 cancer susceptibility candidate 1 -1.91988
ZNF747 zinc finger protein 747 -1.89373
NPY4R neuropeptide Y receptor Y4 -1.87313
PDIA2 protein disulfide isomerase family A, member 2 -1.86986
UCP1 uncoupling protein 1 (mitochondrial, proton carrier) -1.86217
TUBA3C tubulin, alpha 3c -1.85557
ADGRV1 adhesion G protein-coupled receptor V1 -1.8555
MDFIC MyoD family inhibitor domain containing -1.85068
NF2 neurofibromin 2 (merlin) -1.84892
NDUFAB1 NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa -1.83841
ZFHX4 zinc finger homeobox 4 -1.82218
IVL involucrin -1.81377
SERPINA7 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7 -1.81298
SETD6 SET domain containing 6 -1.79828
CD4 CD4 molecule -1.78406
SH3TC1 SH3 domain and tetratricopeptide repeats 1 -1.77552
CARD14 caspase recruitment domain family, member 14 -1.77085
RANBP1 RAN binding protein 1 -1.7646
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 -1.75807
PCDHGC3 protocadherin gamma subfamily C, 3 -1.71845
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 -1.71282
AP1B1 adaptor-related protein complex 1, beta 1 subunit -1.70397
WDR78 WD repeat domain 78 -1.69339
IL1RAP interleukin 1 receptor accessory protein -1.69045
DNAH3 dynein, axonemal, heavy chain 3 -1.68905
IL2RG interleukin 2 receptor, gamma -1.68704
EYA3 EYA transcriptional coactivator and phosphatase 3 -1.68128
APBA1 amyloid beta (A4) precursor protein-binding, family A, member 1 -1.67957
KIF13B kinesin family member 13B -1.67877
HIST1H1E histone cluster 1, H1e -1.67726
GRPR gastrin-releasing peptide receptor -1.67708
AIFM1 apoptosis-inducing factor, mitochondrion-associated, 1 -1.66916
MTNR1A melatonin receptor 1A -1.66783
MFAP5 microfibrillar associated protein 5 -1.6587
GNRHR gonadotropin-releasing hormone receptor -1.65837
MEF2C myocyte enhancer factor 2C -1.65726
TBX1 T-box 1 -1.63463
CYLC2 cylicin, basic protein of sperm head cytoskeleton 2 -1.63286
MRS2 MRS2 magnesium transporter -1.63148
CYP19A1 cytochrome P450, family 19, subfamily A, polypeptide 1 -1.62981
PRND prion protein 2 (dublet) -1.62873
SPICE1 spindle and centriole associated protein 1 -1.61809
DHRS1 dehydrogenase/reductase (SDR family) member 1 -1.61282
NELL1 NEL-like 1 (chicken) -1.57615
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4 -1.56629
CHML choroideremia-like (Rab escort protein 2) -1.5662
RGSL1 regulator of G-protein signaling like 1 -1.56328
IFI44 interferon-induced protein 44 -1.54516
TDP2 tyrosyl-DNA phosphodiesterase 2 -1.53741
ANKHD1 ankyrin repeat and KH domain containing 1 -1.53677
IFNA2 interferon, alpha 2 -1.53557
GJB3 gap junction protein, beta 3, 31kDa -1.53295
CASP10 caspase 10, apoptosis-related cysteine peptidase -1.52753
GRB14 growth factor receptor-bound protein 14 -1.5273
CUBN cubilin (intrinsic factor-cobalamin receptor) -1.5233
TRPM2 transient receptor potential cation channel, subfamily M, member 2 -1.51783
HNF4A hepatocyte nuclear factor 4, alpha -1.51235
TM4SF20 transmembrane 4 L six family member 20 -1.51023
COPG2IT1 COPG2 imprinted transcript 1 (non-protein coding) -1.50972
NHP2L1 NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) -1.50838
DCSTAMP dendrocyte expressed seven transmembrane protein -1.50438
RAP2C RAP2C, member of RAS oncogene family -1.50089
PTPRR protein tyrosine phosphatase, receptor type, R -1.49924
E2F2 E2F transcription factor 2 -1.49879
IL24 interleukin 24 -1.4853
RAPSN receptor-associated protein of the synapse -1.47922
CALR calreticulin -1.47583
TFPT TCF3 (E2A) fusion partner (in childhood Leukemia) -1.47424
ZNF85 zinc finger protein 85 -1.47395
HPR haptoglobin-related protein -1.46637
TP73-AS1 TP73 antisense RNA 1 -1.4644
ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 -1.45987
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -1.44844
CLDN8 claudin 8 -1.44769
TNFRSF11A tumor necrosis factor receptor superfamily, member 11a, NFKB activator -1.44724
KLHL11 kelch-like family member 11 -1.44279
PRKCB protein kinase C, beta -1.43694
PRO2964 uncharacterized protein PRO2964 -1.43459
IL1RAPL2 interleukin 1 receptor accessory protein-like 2 -1.43414
PLA2G4A phospholipase A2, group IVA (cytosolic, calcium-dependent) -1.43184
ECH1 enoyl CoA hydratase 1, peroxisomal -1.42464
GSTA3 glutathione S-transferase alpha 3 -1.42179
CHIA chitinase, acidic -1.41688