SW1783 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description disease: astrocytoma (Cell Line Ontology, CLO_0009191)
Similar Terms
Downloads & Tools

Genes

46 genes with high or low copy number in SW1783 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 4.51153
NOA1 nitric oxide associated 1 4.51153
SPINK2 serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor) 4.51153
IGFBP7 insulin-like growth factor binding protein 7 4.51153
PAICS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase 3.12177
PDCL2 phosducin-like 2 3.12177
AASDH aminoadipate-semialdehyde dehydrogenase 3.12177
NMU neuromedin U 3.12177
THEGL theg spermatid protein-like 3.12177
HOPX HOP homeobox 3.12177
ARL9 ADP-ribosylation factor-like 9 3.12177
PPAT phosphoribosyl pyrophosphate amidotransferase 3.12177
SRP72 signal recognition particle 72kDa 3.12177
CEP135 centrosomal protein 135kDa 2.93899
KDR kinase insert domain receptor 2.93899
CLOCK clock circadian regulator 2.93899
SRD5A3-AS1 SRD5A3 antisense RNA 1 2.93899
SRD5A3 steroid 5 alpha-reductase 3 2.93899
LOC644145 exocyst complex component 1 pseudogene 2.93899
EXOC1 exocyst complex component 1 2.93899
TMEM165 transmembrane protein 165 2.93899
KIAA1211 KIAA1211 2.76305
MAGI2-AS3 MAGI2 antisense RNA 3 2.59653
MAGI2-AS2 MAGI2 antisense RNA 2 2.59653
KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog 2.59653
MIR548M microRNA 548m 2.49065
CHIC2 cysteine-rich hydrophobic domain 2 2.44392
RPL21P44 ribosomal protein L21 pseudogene 44 2.44392
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 2.44392
GSX2 GS homeobox 2 2.44392
PDGFRA platelet-derived growth factor receptor, alpha polypeptide 2.41451
CD36 CD36 molecule (thrombospondin receptor) 2.41451
GNAT3 guanine nucleotide binding protein, alpha transducing 3 2.41451
ETV1 ets variant 1 2.26395
DGKB diacylglycerol kinase, beta 90kDa 2.24139
REST RE1-silencing transcription factor 2.15316
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 2.10038

low copy number

Symbol Name Standardized Value
AQP12B aquaporin 12B -5.12655
AQP12A aquaporin 12A -5.12655
DHDDS dehydrodolichyl diphosphate synthase -5.12655
LIN28A lin-28 homolog A (C. elegans) -5.12655
KIF1A kinesin family member 1A -5.12655
CAPN10 calpain 10 -5.12655
GPR35 G protein-coupled receptor 35 -5.12655
UGT2B28 UDP glucuronosyltransferase 2 family, polypeptide B28 -3.04299
EEF1DP3 eukaryotic translation elongation factor 1 delta pseudogene 3 -2.80776