SW872 Gene Set

Dataset GDSC Cell Line Gene Expression Profiles
Category transcriptomics
Type cell line
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Genes

213 genes with high or low expression in SW872 relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 3.48292
SLC27A6 solute carrier family 27 (fatty acid transporter), member 6 3.16523
MMD monocyte to macrophage differentiation-associated 3.08068
RHOBTB3 Rho-related BTB domain containing 3 2.80977
TRPA1 transient receptor potential cation channel, subfamily A, member 1 2.71542
PTPRA protein tyrosine phosphatase, receptor type, A 2.52454
MED7 mediator complex subunit 7 2.50217
SMAD5 SMAD family member 5 2.35588
LIFR leukemia inhibitory factor receptor alpha 2.32351
ENG endoglin 2.24762
CETP cholesteryl ester transfer protein, plasma 2.20719
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b 2.17047
DHX29 DEAH (Asp-Glu-Ala-His) box polypeptide 29 2.15123
KDM3B lysine (K)-specific demethylase 3B 2.1404
COLEC10 collectin sub-family member 10 (C-type lectin) 2.12966
IL6ST interleukin 6 signal transducer 2.11342
ANGPT1 angiopoietin 1 2.09254
KIF20A kinesin family member 20A 2.08243
BGN biglycan 2.06024
PDE5A phosphodiesterase 5A, cGMP-specific 2.01749
PIEZO2 piezo-type mechanosensitive ion channel component 2 2.01042
NPAS3 neuronal PAS domain protein 3 2.00929
SLC6A16 solute carrier family 6, member 16 1.99634
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 1.96767
ERAP2 endoplasmic reticulum aminopeptidase 2 1.96436
DZIP1 DAZ interacting zinc finger protein 1 1.94957
RCAN2 regulator of calcineurin 2 1.9392
NR2F1 nuclear receptor subfamily 2, group F, member 1 1.93775
GABRA2 gamma-aminobutyric acid (GABA) A receptor, alpha 2 1.92293
PLA2G5 phospholipase A2, group V 1.90767
NEO1 neogenin 1 1.8885
ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 1.85633
KLF9 Kruppel-like factor 9 1.83786
F2R coagulation factor II (thrombin) receptor 1.83444
MOCS2 molybdenum cofactor synthesis 2 1.82707
SNTB2 syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2) 1.81541
LAMB1 laminin, beta 1 1.8122
NR1H4 nuclear receptor subfamily 1, group H, member 4 1.80305
IRF1 interferon regulatory factor 1 1.80107
RARB retinoic acid receptor, beta 1.78477
ERCC8 excision repair cross-complementation group 8 1.78362
ZNF75D zinc finger protein 75D 1.77572
SREK1IP1 SREK1-interacting protein 1 1.77552
DCHS1 dachsous cadherin-related 1 1.77483
BRD8 bromodomain containing 8 1.76159
MXD4 MAX dimerization protein 4 1.75121
TMEM100 transmembrane protein 100 1.72927
PCNX pecanex homolog (Drosophila) 1.7145
ISOC1 isochorismatase domain containing 1 1.69128
TAF11 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa 1.686
ADGRE1 adhesion G protein-coupled receptor E1 1.68526
SEPT8 septin 8 1.68524
EHD3 EH-domain containing 3 1.68025
TBKBP1 TBK1 binding protein 1 1.67792
GLB1L galactosidase, beta 1-like 1.66519
ARF5 ADP-ribosylation factor 5 1.65779
VAMP5 vesicle-associated membrane protein 5 1.65755
PPIC peptidylprolyl isomerase C (cyclophilin C) 1.65288
HIP1 huntingtin interacting protein 1 1.64798
YTHDC2 YTH domain containing 2 1.64731
ILK integrin-linked kinase 1.64163
VASH1 vasohibin 1 1.63178
THRA thyroid hormone receptor, alpha 1.63025
GLCE glucuronic acid epimerase 1.6252
GANAB glucosidase, alpha; neutral AB 1.61225
IDO1 indoleamine 2,3-dioxygenase 1 1.60297
CD1D CD1d molecule 1.59592
ADD1 adducin 1 (alpha) 1.58221
CDC25C cell division cycle 25C 1.57749
CDC42SE2 CDC42 small effector 2 1.56879
TRIM23 tripartite motif containing 23 1.56667
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 1.56442
DNAJB5 DnaJ (Hsp40) homolog, subfamily B, member 5 1.56244
PDGFRB platelet-derived growth factor receptor, beta polypeptide 1.56212
A2M alpha-2-macroglobulin 1.55904
GMPR guanosine monophosphate reductase 1.55054
SNED1 sushi, nidogen and EGF-like domains 1 1.53423
TRIM5 tripartite motif containing 5 1.52837
SBSPON somatomedin B and thrombospondin, type 1 domain containing 1.5281
FOXF1 forkhead box F1 1.51952
TPP2 tripeptidyl peptidase II 1.51455
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 1.51121
OLFML2B olfactomedin-like 2B 1.50777
RARRES2 retinoic acid receptor responder (tazarotene induced) 2 1.50681
DENND5A DENN/MADD domain containing 5A 1.50509
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 1.5029
HAUS7 HAUS augmin-like complex, subunit 7 1.49694
ATXN7L1 ataxin 7-like 1 1.49649
FZD9 frizzled class receptor 9 1.49447
KIF3A kinesin family member 3A 1.49032
PPAP2A phosphatidic acid phosphatase type 2A 1.48872
GZMM granzyme M (lymphocyte met-ase 1) 1.4848
ZKSCAN3 zinc finger with KRAB and SCAN domains 3 1.47593
SNRPC small nuclear ribonucleoprotein polypeptide C 1.47369
CSRP1 cysteine and glycine-rich protein 1 1.45619
GLI3 GLI family zinc finger 3 1.45234
TYRP1 tyrosinase-related protein 1 1.44531
P3H4 prolyl 3-hydroxylase family member 4 (non-enzymatic) 1.44256
CETN3 centrin, EF-hand protein, 3 1.44104
CYB5B cytochrome b5 type B (outer mitochondrial membrane) 1.43513
ATG12 autophagy related 12 1.43333
LRRC17 leucine rich repeat containing 17 1.43265
EFNB1 ephrin-B1 1.43211
NKX3-1 NK3 homeobox 1 1.42592
LOC650293 seven transmembrane helix receptor 1.42389
RDX radixin 1.42203
DIXDC1 DIX domain containing 1 1.42194
CTSF cathepsin F 1.42136
RARRES3 retinoic acid receptor responder (tazarotene induced) 3 1.41841
TNS2 tensin 2 1.41792

low expression

Symbol Name Standardized Value
ASTE1 asteroid homolog 1 (Drosophila) -3.47998
WDR33 WD repeat domain 33 -3.47007
SLC6A9 solute carrier family 6 (neurotransmitter transporter, glycine), member 9 -3.23235
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -2.91168
ST8SIA3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 -2.84002
TRPC7 transient receptor potential cation channel, subfamily C, member 7 -2.73977
HIST1H2AI histone cluster 1, H2ai -2.62123
DNAJA3 DnaJ (Hsp40) homolog, subfamily A, member 3 -2.47815
JTB jumping translocation breakpoint -2.328
PLEKHG6 pleckstrin homology domain containing, family G (with RhoGef domain) member 6 -2.28439
GHITM growth hormone inducible transmembrane protein -2.26138
ERN2 endoplasmic reticulum to nucleus signaling 2 -2.22068
KLF1 Kruppel-like factor 1 (erythroid) -2.21143
NKX2-1 NK2 homeobox 1 -2.10928
BIK BCL2-interacting killer (apoptosis-inducing) -2.08059
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 -2.06624
PTPRJ protein tyrosine phosphatase, receptor type, J -2.05122
DPP6 dipeptidyl-peptidase 6 -2.04905
TPST2 tyrosylprotein sulfotransferase 2 -2.04486
UNC93A unc-93 homolog A (C. elegans) -2.04162
COG2 component of oligomeric golgi complex 2 -2.01995
MIP major intrinsic protein of lens fiber -2.01608
HIST1H2BG histone cluster 1, H2bg -1.97769
TMC5 transmembrane channel-like 5 -1.97748
LCP1 lymphocyte cytosolic protein 1 (L-plastin) -1.9771
SLCO1C1 solute carrier organic anion transporter family, member 1C1 -1.9497
UGT2B4 UDP glucuronosyltransferase 2 family, polypeptide B4 -1.8756
CLCA4 chloride channel accessory 4 -1.85262
ADCY2 adenylate cyclase 2 (brain) -1.85051
NOP10 NOP10 ribonucleoprotein -1.83034
SMNDC1 survival motor neuron domain containing 1 -1.82029
PCDHGA11 protocadherin gamma subfamily A, 11 -1.81001
VDAC2 voltage-dependent anion channel 2 -1.79044
HTR4 5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled -1.78349
CA1 carbonic anhydrase I -1.75531
TM4SF20 transmembrane 4 L six family member 20 -1.75458
ALDH3B2 aldehyde dehydrogenase 3 family, member B2 -1.74765
XKR8 XK, Kell blood group complex subunit-related family, member 8 -1.74732
NRL neural retina leucine zipper -1.73601
ADAM3A ADAM metallopeptidase domain 3A (pseudogene) -1.73402
CXCR2 chemokine (C-X-C motif) receptor 2 -1.73027
CEPT1 choline/ethanolamine phosphotransferase 1 -1.72766
RRP12 ribosomal RNA processing 12 homolog (S. cerevisiae) -1.69111
CD300C CD300c molecule -1.691
PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 -1.69066
ANGPT2 angiopoietin 2 -1.68934
SLURP1 secreted LY6/PLAUR domain containing 1 -1.68822
SUPV3L1 suppressor of var1, 3-like 1 (S. cerevisiae) -1.67543
PTEN phosphatase and tensin homolog -1.67169
PAPPA2 pappalysin 2 -1.66574
PRLH prolactin releasing hormone -1.66139
AMELX amelogenin, X-linked -1.65987
FGF5 fibroblast growth factor 5 -1.65384
KRT23 keratin 23, type I -1.65236
TAAR5 trace amine associated receptor 5 -1.6315
IKZF5 IKAROS family zinc finger 5 (Pegasus) -1.63132
UCK2 uridine-cytidine kinase 2 -1.62999
VAV2 vav 2 guanine nucleotide exchange factor -1.62792
PCGF1 polycomb group ring finger 1 -1.61748
POU6F2 POU class 6 homeobox 2 -1.61696
ECEL1 endothelin converting enzyme-like 1 -1.61492
MIA2 melanoma inhibitory activity 2 -1.60599
OSGEP O-sialoglycoprotein endopeptidase -1.60187
DDX21 DEAD (Asp-Glu-Ala-Asp) box helicase 21 -1.5939
GABRA4 gamma-aminobutyric acid (GABA) A receptor, alpha 4 -1.59125
PGAM2 phosphoglycerate mutase 2 (muscle) -1.58413
WAPAL wings apart-like homolog (Drosophila) -1.56408
GCM2 glial cells missing homolog 2 (Drosophila) -1.56337
FGF20 fibroblast growth factor 20 -1.56231
BRINP2 bone morphogenetic protein/retinoic acid inducible neural-specific 2 -1.55475
SCYL3 SCY1-like 3 (S. cerevisiae) -1.55303
ERP29 endoplasmic reticulum protein 29 -1.55248
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 -1.54937
TRAF3IP3 TRAF3 interacting protein 3 -1.54353
RAB40A RAB40A, member RAS oncogene family -1.53065
GTPBP2 GTP binding protein 2 -1.52625
TP53I3 tumor protein p53 inducible protein 3 -1.52591
TUBB1 tubulin, beta 1 class VI -1.51598
PDCD11 programmed cell death 11 -1.51066
TFB2M transcription factor B2, mitochondrial -1.50826
LRPPRC leucine-rich pentatricopeptide repeat containing -1.50705
FAM175B family with sequence similarity 175, member B -1.49552
LCK LCK proto-oncogene, Src family tyrosine kinase -1.49373
CYP2J2 cytochrome P450, family 2, subfamily J, polypeptide 2 -1.48879
CALML3 calmodulin-like 3 -1.48523
EIF3J eukaryotic translation initiation factor 3, subunit J -1.47881
CHRNA9 cholinergic receptor, nicotinic, alpha 9 (neuronal) -1.47589
NOLC1 nucleolar and coiled-body phosphoprotein 1 -1.47515
WNT10B wingless-type MMTV integration site family, member 10B -1.47492
XPOT exportin, tRNA -1.47327
SLC18A3 solute carrier family 18 (vesicular acetylcholine transporter), member 3 -1.47091
PAM16 presequence translocase-associated motor 16 homolog (S. cerevisiae) -1.47073
FKBP5 FK506 binding protein 5 -1.46682
IFNA17 interferon, alpha 17 -1.46521
CPM carboxypeptidase M -1.46139
RNASE6 ribonuclease, RNase A family, k6 -1.45992
NAG18 NAG18 mRNA -1.45942
RABGGTB Rab geranylgeranyltransferase, beta subunit -1.45749
ERC1 ELKS/RAB6-interacting/CAST family member 1 -1.44999
ATP8A1 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 -1.44586
YRDC yrdC N(6)-threonylcarbamoyltransferase domain containing -1.44516
TCP1 t-complex 1 -1.43168
PAX2 paired box 2 -1.43105