SW948 Gene Set

Dataset GDSC Cell Line Gene Expression Profiles
Category transcriptomics
Type cell line
Similar Terms
Downloads & Tools

Genes

350 genes with high or low expression in SW948 relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
HDHD3 haloacid dehalogenase-like hydrolase domain containing 3 3.05573
ACTR1B ARP1 actin-related protein 1 homolog B, centractin beta (yeast) 2.94523
RPIA ribose 5-phosphate isomerase A 2.81384
HBA1 hemoglobin, alpha 1 2.52076
HBA2 hemoglobin, alpha 2 2.50991
GIGYF2 GRB10 interacting GYF protein 2 2.49078
SLC35D2 solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2 2.48419
AVL9 AVL9 homolog (S. cerevisiase) 2.31759
OTC ornithine carbamoyltransferase 2.31248
COX5B cytochrome c oxidase subunit Vb 2.30962
SLC26A6 solute carrier family 26 (anion exchanger), member 6 2.246
OLFM4 olfactomedin 4 2.24083
NEK3 NIMA-related kinase 3 2.22215
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 2.22056
SPR sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase) 2.20342
CYP2B6 cytochrome P450, family 2, subfamily B, polypeptide 6 2.18255
CUL4A cullin 4A 2.17332
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 2.16154
RAB20 RAB20, member RAS oncogene family 2.15843
IMPDH1 IMP (inosine 5'-monophosphate) dehydrogenase 1 2.1571
KCNQ1 potassium channel, voltage gated KQT-like subfamily Q, member 1 2.14515
LGALS4 lectin, galactoside-binding, soluble, 4 2.13691
HAAO 3-hydroxyanthranilate 3,4-dioxygenase 2.12583
BCL2L14 BCL2-like 14 (apoptosis facilitator) 2.11212
ATP7B ATPase, Cu++ transporting, beta polypeptide 2.0911
CRYL1 crystallin, lambda 1 2.06292
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 2.06063
FABP1 fatty acid binding protein 1, liver 2.05231
USH1C Usher syndrome 1C (autosomal recessive, severe) 2.05043
UCKL1 uridine-cytidine kinase 1-like 1 2.04923
RPAIN RPA interacting protein 2.04295
POF1B premature ovarian failure, 1B 2.02576
GPR35 G protein-coupled receptor 35 2.02053
HSDL2 hydroxysteroid dehydrogenase like 2 2.02014
BTNL3 butyrophilin-like 3 2.01771
ING1 inhibitor of growth family, member 1 2.01436
ABR active BCR-related 1.99251
CCDC93 coiled-coil domain containing 93 1.96784
CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 1.95812
BTBD2 BTB (POZ) domain containing 2 1.95697
UFM1 ubiquitin-fold modifier 1 1.95193
SEMG1 semenogelin I 1.9484
AKAP1 A kinase (PRKA) anchor protein 1 1.94635
MLEC malectin 1.93924
MICU2 mitochondrial calcium uptake 2 1.93447
SLC25A15 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 1.93268
IFT88 intraflagellar transport 88 1.91218
FANCC Fanconi anemia, complementation group C 1.91053
DTX2 deltex 2, E3 ubiquitin ligase 1.90877
VPS13A vacuolar protein sorting 13 homolog A (S. cerevisiae) 1.89994
SLC12A9 solute carrier family 12, member 9 1.89915
MLXIPL MLX interacting protein-like 1.89812
ABCA2 ATP-binding cassette, sub-family A (ABC1), member 2 1.87048
MYO15B myosin XVB 1.86194
CANT1 calcium activated nucleotidase 1 1.86169
AAMP angio-associated, migratory cell protein 1.85152
RHOB ras homolog family member B 1.85133
CYP2B7P cytochrome P450, family 2, subfamily B, polypeptide 7, pseudogene 1.84945
NR1I2 nuclear receptor subfamily 1, group I, member 2 1.8392
ARSE arylsulfatase E (chondrodysplasia punctata 1) 1.83905
ABHD11 abhydrolase domain containing 11 1.83485
CDX2 caudal type homeobox 2 1.83448
IHH indian hedgehog 1.81869
OSBPL2 oxysterol binding protein-like 2 1.80926
KDM5C lysine (K)-specific demethylase 5C 1.80119
ARHGAP32 Rho GTPase activating protein 32 1.79436
TMEM63A transmembrane protein 63A 1.78967
PLEKHG6 pleckstrin homology domain containing, family G (with RhoGef domain) member 6 1.7887
PCYT2 phosphate cytidylyltransferase 2, ethanolamine 1.78397
NSUN7 NOP2/Sun domain family, member 7 1.78086
TAF4 TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa 1.77657
MEP1A meprin A, alpha (PABA peptide hydrolase) 1.77321
ERN2 endoplasmic reticulum to nucleus signaling 2 1.76863
ASL argininosuccinate lyase 1.76505
CDC14B cell division cycle 14B 1.75574
PTGES2 prostaglandin E synthase 2 1.74791
RUNDC3B RUN domain containing 3B 1.74088
ANKH ANKH inorganic pyrophosphate transport regulator 1.71513
TRIM15 tripartite motif containing 15 1.71426
SH3YL1 SH3 and SYLF domain containing 1 1.71236
ESRRA estrogen-related receptor alpha 1.71039
PREP prolyl endopeptidase 1.70972
PDZD3 PDZ domain containing 3 1.70326
RNF43 ring finger protein 43 1.70292
CERS6 ceramide synthase 6 1.70258
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1 1.70188
JRKL JRK-like 1.7007
CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like 1.69641
APOBEC1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 1.6963
CDX1 caudal type homeobox 1 1.6903
POLR1D polymerase (RNA) I polypeptide D, 16kDa 1.69021
DLEU1 deleted in lymphocytic leukemia 1 (non-protein coding) 1.68989
FABP2 fatty acid binding protein 2, intestinal 1.68806
HES1 hes family bHLH transcription factor 1 1.68679
MIPEP mitochondrial intermediate peptidase 1.68612
ACADS acyl-CoA dehydrogenase, C-2 to C-3 short chain 1.68435
GUCY2C guanylate cyclase 2C 1.68181
CDK8 cyclin-dependent kinase 8 1.67967
TCTA T-cell leukemia translocation altered 1.67852
HYAL3 hyaluronoglucosaminidase 3 1.67848
GSTK1 glutathione S-transferase kappa 1 1.6769
HEPH hephaestin 1.67575
VIL1 villin 1 1.67382
SLC11A2 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 1.66509
CLUH clustered mitochondria (cluA/CLU1) homolog 1.65654
N4BP2L2 NEDD4 binding protein 2-like 2 1.65345
VIPR1 vasoactive intestinal peptide receptor 1 1.65292
GALNT12 polypeptide N-acetylgalactosaminyltransferase 12 1.65196
SUCLG1 succinate-CoA ligase, alpha subunit 1.65172
LRRC2 leucine rich repeat containing 2 1.65122
MPHOSPH8 M-phase phosphoprotein 8 1.65015
ACOT8 acyl-CoA thioesterase 8 1.64615
DOCK6 dedicator of cytokinesis 6 1.64245
FBXL8 F-box and leucine-rich repeat protein 8 1.63849
PLEKHJ1 pleckstrin homology domain containing, family J member 1 1.63044
MUC3B mucin 3B, cell surface associated 1.63026
UTP14C UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast) 1.62958
ACY1 aminoacylase 1 1.62645
LY6G6D lymphocyte antigen 6 complex, locus G6D 1.62564
GSK3A glycogen synthase kinase 3 alpha 1.62109
LAD1 ladinin 1 1.61704
EPS8L3 EPS8-like 3 1.61609
USP12 ubiquitin specific peptidase 12 1.61514
ATP10B ATPase, class V, type 10B 1.61124
GPA33 glycoprotein A33 (transmembrane) 1.60846
ZDHHC3 zinc finger, DHHC-type containing 3 1.60442
UNC93A unc-93 homolog A (C. elegans) 1.60315
SNX5 sorting nexin 5 1.60183
PILRB paired immunoglobin-like type 2 receptor beta 1.59963
STAP2 signal transducing adaptor family member 2 1.59368
CAPN5 calpain 5 1.58393
RALGPS1 Ral GEF with PH domain and SH3 binding motif 1 1.58234
AMACR alpha-methylacyl-CoA racemase 1.58161
KLF2 Kruppel-like factor 2 1.58053
NAT6 N-acetyltransferase 6 (GCN5-related) 1.57965
PIP5K1B phosphatidylinositol-4-phosphate 5-kinase, type I, beta 1.57374
SLC29A2 solute carrier family 29 (equilibrative nucleoside transporter), member 2 1.57003
TRIM31 tripartite motif containing 31 1.56895
SECISBP2 SECIS binding protein 2 1.56834
KLHL23 kelch-like family member 23 1.56775
XIST X inactive specific transcript (non-protein coding) 1.55963
HOOK2 hook microtubule-tethering protein 2 1.55592
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 1.55511
NCOR1 nuclear receptor corepressor 1 1.54939
ZFP36 ZFP36 ring finger protein 1.54853
UPF3A UPF3 regulator of nonsense transcripts homolog A (yeast) 1.53916
PLCH1 phospholipase C, eta 1 1.53446
TNK2 tyrosine kinase, non-receptor, 2 1.53443
TM4SF5 transmembrane 4 L six family member 5 1.53419
FOXJ1 forkhead box J1 1.53323
EPHA1 EPH receptor A1 1.5296
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) 1.52495
SRPK1 SRSF protein kinase 1 1.51912
LRP4 low density lipoprotein receptor-related protein 4 1.51797
PMPCA peptidase (mitochondrial processing) alpha 1.51542
STK24 serine/threonine kinase 24 1.5136
SH2D3A SH2 domain containing 3A 1.5104
STK25 serine/threonine kinase 25 1.50299
TSC22D1 TSC22 domain family, member 1 1.50122
MUC13 mucin 13, cell surface associated 1.49958
CDHR5 cadherin-related family member 5 1.4991
DPEP1 dipeptidase 1 (renal) 1.49544
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 1.49436
EPHB4 EPH receptor B4 1.49294
GTPBP6 GTP binding protein 6 (putative) 1.49276
MNT MAX network transcriptional repressor 1.48917
SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 1.48706
SIGIRR single immunoglobulin and toll-interleukin 1 receptor (TIR) domain 1.48626
LRRC16A leucine rich repeat containing 16A 1.48317
HNF1A HNF1 homeobox A 1.48247
SP3 Sp3 transcription factor 1.48242
ITGA6 integrin, alpha 6 1.47977
PRR13 proline rich 13 1.4776
MYO1A myosin IA 1.47547
NCOA6 nuclear receptor coactivator 6 1.47514
EPHB3 EPH receptor B3 1.47185
DNM2 dynamin 2 1.47095
CALML4 calmodulin-like 4 1.46997
GATA6 GATA binding protein 6 1.46911
NAA16 N(alpha)-acetyltransferase 16, NatA auxiliary subunit 1.46511
CBLC Cbl proto-oncogene C, E3 ubiquitin protein ligase 1.46343
SLC5A1 solute carrier family 5 (sodium/glucose cotransporter), member 1 1.46293
EPHB2 EPH receptor B2 1.46109
ACF Asymmetric crying facies (Cayler cardiofacial syndrome) 1.4605
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 1.45968
FBXO46 F-box protein 46 1.45932
CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 1.45711
STX5 syntaxin 5 1.4569
NCLN nicalin 1.45607
RRP9 ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast) 1.45338
IER2 immediate early response 2 1.45276
TMEM92 transmembrane protein 92 1.45078
EHHADH enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase 1.44936
GRTP1 growth hormone regulated TBC protein 1 1.44637
SEMA4G sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G 1.44462
HDHD1 haloacid dehalogenase-like hydrolase domain containing 1 1.44221
KCNV1 potassium channel, voltage gated modifier subfamily V, member 1 1.43927
MED14 mediator complex subunit 14 1.43549
TBC1D4 TBC1 domain family, member 4 1.43436
SLC3A1 solute carrier family 3 (amino acid transporter heavy chain), member 1 1.43412
MTMR6 myotubularin related protein 6 1.43281
SPINK4 serine peptidase inhibitor, Kazal type 4 1.43244
ACAA1 acetyl-CoA acyltransferase 1 1.42304
CLDN3 claudin 3 1.42133
ARHGEF10L Rho guanine nucleotide exchange factor (GEF) 10-like 1.41843
SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 1.41653

low expression

Symbol Name Standardized Value
ZNF419 zinc finger protein 419 -3.23279
IFNA8 interferon, alpha 8 -2.92459
FAM63B family with sequence similarity 63, member B -2.79754
DCLRE1C DNA cross-link repair 1C -2.67293
NME7 NME/NM23 family member 7 -2.63118
ADAM2 ADAM metallopeptidase domain 2 -2.6105
PLS3 plastin 3 -2.60096
SIGLEC15 sialic acid binding Ig-like lectin 15 -2.49414
HHAT hedgehog acyltransferase -2.33852
TRPM1 transient receptor potential cation channel, subfamily M, member 1 -2.2927
FZD10 frizzled class receptor 10 -2.26182
GBAS glioblastoma amplified sequence -2.24451
OLIG2 oligodendrocyte lineage transcription factor 2 -2.17834
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -2.16901
SLAMF7 SLAM family member 7 -2.08551
KIAA1467 KIAA1467 -2.07784
PLCL1 phospholipase C-like 1 -2.07651
RFPL1 ret finger protein-like 1 -2.06381
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -2.06049
ATG14 autophagy related 14 -2.02028
RIT1 Ras-like without CAAX 1 -2.00735
UROD uroporphyrinogen decarboxylase -2.00507
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -1.9866
FMO3 flavin containing monooxygenase 3 -1.94453
ADAM10 ADAM metallopeptidase domain 10 -1.9433
PGK2 phosphoglycerate kinase 2 -1.9397
RHD Rh blood group, D antigen -1.92883
PLG plasminogen -1.92672
KLRG1 killer cell lectin-like receptor subfamily G, member 1 -1.92442
HACD3 3-hydroxyacyl-CoA dehydratase 3 -1.90033
KYNU kynureninase -1.89392
NNAT neuronatin -1.88618
PRDM5 PR domain containing 5 -1.88522
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) -1.86165
EXTL1 exostosin-like glycosyltransferase 1 -1.85212
KCND1 potassium channel, voltage gated Shal related subfamily D, member 1 -1.84085
PSMD10 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 -1.83508
TCEA2 transcription elongation factor A (SII), 2 -1.8349
RAB31 RAB31, member RAS oncogene family -1.81661
GALNT10 polypeptide N-acetylgalactosaminyltransferase 10 -1.81502
F8 coagulation factor VIII, procoagulant component -1.81213
EGFL6 EGF-like-domain, multiple 6 -1.80429
TAF1B TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa -1.80358
BCAS2 breast carcinoma amplified sequence 2 -1.80111
HSD17B6 hydroxysteroid (17-beta) dehydrogenase 6 -1.79905
MIP major intrinsic protein of lens fiber -1.79227
PEG3 paternally expressed 3 -1.78969
UBE2L6 ubiquitin-conjugating enzyme E2L 6 -1.78673
PSMC6 proteasome (prosome, macropain) 26S subunit, ATPase, 6 -1.78613
SENP7 SUMO1/sentrin specific peptidase 7 -1.78306
HSPB3 heat shock 27kDa protein 3 -1.77661
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 -1.76861
TTLL1 tubulin tyrosine ligase-like family member 1 -1.76042
VAMP7 vesicle-associated membrane protein 7 -1.75214
GNAT3 guanine nucleotide binding protein, alpha transducing 3 -1.74938
SOS2 son of sevenless homolog 2 (Drosophila) -1.74428
COL13A1 collagen, type XIII, alpha 1 -1.74252
CEP170 centrosomal protein 170kDa -1.72932
HAND1 heart and neural crest derivatives expressed 1 -1.72874
PURG purine-rich element binding protein G -1.72703
DTX3 deltex 3, E3 ubiquitin ligase -1.72518
FTO fat mass and obesity associated -1.71754
CRYBA4 crystallin, beta A4 -1.70986
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -1.70814
THAP9 THAP domain containing 9 -1.70551
SSBP2 single-stranded DNA binding protein 2 -1.69123
MC1R melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor) -1.691
IFI6 interferon, alpha-inducible protein 6 -1.67691
ENY2 enhancer of yellow 2 homolog (Drosophila) -1.6708
ATP6V1G2 ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2 -1.66906
MCTP1 multiple C2 domains, transmembrane 1 -1.6652
SUPT4H1 suppressor of Ty 4 homolog 1 (S. cerevisiae) -1.65295
RDX radixin -1.64428
SKP1 S-phase kinase-associated protein 1 -1.64373
IGLC1 immunoglobulin lambda constant 1 (Mcg marker) -1.6408
LRRC17 leucine rich repeat containing 17 -1.64013
FERMT2 fermitin family member 2 -1.63437
VAX2 ventral anterior homeobox 2 -1.62948
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) -1.62308
PQLC2 PQ loop repeat containing 2 -1.62085
CDC50A cell division cycle 50 P4-ATPase accessory subunit A -1.6179
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -1.61563
COPS4 COP9 signalosome subunit 4 -1.61013
P3H1 prolyl 3-hydroxylase 1 -1.60706
GABARAPL2 GABA(A) receptor-associated protein-like 2 -1.60131
REC8 REC8 meiotic recombination protein -1.59682
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 -1.59668
CCL2 chemokine (C-C motif) ligand 2 -1.59383
MS4A12 membrane-spanning 4-domains, subfamily A, member 12 -1.58688
FAM76A family with sequence similarity 76, member A -1.58076
IGLV6-57 immunoglobulin lambda variable 6-57 -1.57416
CREM cAMP responsive element modulator -1.57385
THBS4 thrombospondin 4 -1.57337
NUDT6 nudix (nucleoside diphosphate linked moiety X)-type motif 6 -1.57238
GPNMB glycoprotein (transmembrane) nmb -1.57099
SS18 synovial sarcoma translocation, chromosome 18 -1.56219
PNMA1 paraneoplastic Ma antigen 1 -1.55796
SIRPA signal-regulatory protein alpha -1.55497
ROR2 receptor tyrosine kinase-like orphan receptor 2 -1.55293
FETUB fetuin B -1.55105
AP1G1 adaptor-related protein complex 1, gamma 1 subunit -1.54775
PAPOLB poly(A) polymerase beta (testis specific) -1.54736
ECD ecdysoneless homolog (Drosophila) -1.54702
VBP1 von Hippel-Lindau binding protein 1 -1.54623
HCFC1R1 host cell factor C1 regulator 1 (XPO1 dependent) -1.54131
CHST10 carbohydrate sulfotransferase 10 -1.53856
EXOSC9 exosome component 9 -1.53136
EID1 EP300 interacting inhibitor of differentiation 1 -1.52638
MAP9 microtubule-associated protein 9 -1.51867
FXR1 fragile X mental retardation, autosomal homolog 1 -1.51856
PEX5L peroxisomal biogenesis factor 5-like -1.5169
FKRP fukutin related protein -1.51074
FCHO1 FCH domain only 1 -1.50961
CLEC7A C-type lectin domain family 7, member A -1.50572
SOCS1 suppressor of cytokine signaling 1 -1.50187
SCNM1 sodium channel modifier 1 -1.49938
KIAA1462 KIAA1462 -1.49732
MBTPS1 membrane-bound transcription factor peptidase, site 1 -1.49476
RASGRP3 RAS guanyl releasing protein 3 (calcium and DAG-regulated) -1.48736
GAMT guanidinoacetate N-methyltransferase -1.48599
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 -1.48472
GOLT1B golgi transport 1B -1.48085
FAM49B family with sequence similarity 49, member B -1.47982
PCDHGC3 protocadherin gamma subfamily C, 3 -1.47771
LAIR2 leukocyte-associated immunoglobulin-like receptor 2 -1.47673
ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 -1.47494
PTPRD protein tyrosine phosphatase, receptor type, D -1.47369
MED6 mediator complex subunit 6 -1.46391
RIOK2 RIO kinase 2 -1.46361
USP14 ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) -1.46259
MPI mannose phosphate isomerase -1.46144
KIFC3 kinesin family member C3 -1.45469
HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 -1.45039
GNB5 guanine nucleotide binding protein (G protein), beta 5 -1.44905
VNN1 vanin 1 -1.44529
ABHD8 abhydrolase domain containing 8 -1.44348
ROBO3 roundabout, axon guidance receptor, homolog 3 (Drosophila) -1.43887
AVPR2 arginine vasopressin receptor 2 -1.43352
PCSK1N proprotein convertase subtilisin/kexin type 1 inhibitor -1.43267
AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4 -1.4302
PSMB2 proteasome (prosome, macropain) subunit, beta type, 2 -1.42924
MAML3 mastermind-like 3 (Drosophila) -1.42596
APOL1 apolipoprotein L, 1 -1.42346
CDK14 cyclin-dependent kinase 14 -1.41875