SW962 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description disease: carcinoma (vulva primary) (Cell Line Ontology, CLO_0009205)
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Genes

65 genes with high or low copy number in SW962 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
RAB3IP RAB3A interacting protein 2.49065
MIR3973 microRNA 3973 2.49065
BEST3 bestrophin 3 2.49065
MIR3913-2 microRNA 3913-2 2.44392
MIR3913-1 microRNA 3913-1 2.44392
MIR1279 microRNA 1279 2.44392
CCT2 chaperonin containing TCP1, subunit 2 (beta) 2.44392
LRRC10 leucine rich repeat containing 10 2.44392
CPSF6 cleavage and polyadenylation specific factor 6, 68kDa 2.44392
YEATS4 YEATS domain containing 4 2.41451
LYZ lysozyme 2.41451
FRS2 fibroblast growth factor receptor substrate 2 2.39327
SLC35E3 solute carrier family 35, member E3 2.39327
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 2.35236
SLC2A10 solute carrier family 2 (facilitated glucose transporter), member 10 2.35236
CPM carboxypeptidase M 2.35236
OCSTAMP osteoclast stimulatory transmembrane protein 2.35236
SLC13A3 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 2.35236
TP53RK TP53 regulating kinase 2.35236
LOC100130075 SUZ RNA binding domain containing 1 pseudogene 2.35236
MIR3616 microRNA 3616 2.35236
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) 2.3178
KCNB1 potassium channel, voltage gated Shab related subfamily B, member 1 2.3178
LINC00494 long intergenic non-protein coding RNA 494 2.3178
PREX1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 2.3178
CSE1L CSE1 chromosome segregation 1-like (yeast) 2.3178
NCOA3 nuclear receptor coactivator 3 2.30944
DDX27 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 2.30944
SNORD12C small nucleolar RNA, C/D box 12C 2.30944
SNORD12B small nucleolar RNA, C/D box 12B 2.30944
EYA2 EYA transcriptional coactivator and phosphatase 2 2.30944
ZMYND8 zinc finger, MYND-type containing 8 2.30944
ZFAS1 ZNFX1 antisense RNA 1 2.30944
LOC100131496 uncharacterized LOC100131496 2.30944
SNORD12 small nucleolar RNA, C/D box 12 2.30944
STAU1 staufen double-stranded RNA binding protein 1 2.30944
PTGIS prostaglandin I2 (prostacyclin) synthase 2.30944
ZNFX1 zinc finger, NFX1-type containing 1 2.30944
UBE2V1 ubiquitin-conjugating enzyme E2 variant 1 2.283
SLC9A8 solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 2.283
SPATA2 spermatogenesis associated 2 2.283
RNF114 ring finger protein 114 2.283
SNAI1 snail family zinc finger 1 2.283
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 2.283
SULF2 sulfatase 2 2.283
TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough 2.283
TMEM189 transmembrane protein 189 2.283
CEBPB CCAAT/enhancer binding protein (C/EBP), beta 2.26395
KCNG1 potassium channel, voltage gated modifier subfamily G, member 1 2.25904
DPM1 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit 2.25904
MIR645 microRNA 645 2.25904
PARD6B par-6 family cell polarity regulator beta 2.25904
MOCS3 molybdenum cofactor synthesis 3 2.25904
BCAS4 breast carcinoma amplified sequence 4 2.25904
ADNP activity-dependent neuroprotector homeobox 2.24845
MIR3194 microRNA 3194 2.24845
FAM65C family with sequence similarity 65, member C 2.24845
PTPN1 protein tyrosine phosphatase, non-receptor type 1 2.24139
ATP9A ATPase, class II, type 9A 2.24139
SALL4 spalt-like transcription factor 4 2.24139
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 2.2355
ZFP64 ZFP64 zinc finger protein 2.22783
PRR5L proline rich 5 like 2.09431
COMMD9 COMM domain containing 9 2.09431
LDLRAD3 low density lipoprotein receptor class A domain containing 3 2.09073