SW982 Gene Set

Dataset GDSC Cell Line Gene Expression Profiles
Category transcriptomics
Type cell line
Description disease: synovial sarcoma (Cell Line Ontology, CLO_0009206)
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Genes

192 genes with high or low expression in SW982 relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
PDLIM7 PDZ and LIM domain 7 (enigma) 2.77755
SOCS5 suppressor of cytokine signaling 5 2.55749
ADAM19 ADAM metallopeptidase domain 19 2.02015
ADGRF5 adhesion G protein-coupled receptor F5 1.99107
TLN1 talin 1 1.99026
TNFSF4 tumor necrosis factor (ligand) superfamily, member 4 1.97006
TBC1D17 TBC1 domain family, member 17 1.96822
AFAP1 actin filament associated protein 1 1.93018
CCL2 chemokine (C-C motif) ligand 2 1.92739
SFRP1 secreted frizzled-related protein 1 1.88901
SSH1 slingshot protein phosphatase 1 1.86978
CAPZB capping protein (actin filament) muscle Z-line, beta 1.86807
TRIM62 tripartite motif containing 62 1.86
OXTR oxytocin receptor 1.8247
ILK integrin-linked kinase 1.76272
GNAI2 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 1.75982
DTWD1 DTW domain containing 1 1.74233
MXRA8 matrix-remodelling associated 8 1.73979
ABI3BP ABI family, member 3 (NESH) binding protein 1.72297
SULF1 sulfatase 1 1.70784
ANPEP alanyl (membrane) aminopeptidase 1.70184
RARB retinoic acid receptor, beta 1.69856
AK5 adenylate kinase 5 1.6887
PLIN3 perilipin 3 1.68536
HAB1 B1 for mucin 1.65215
TAGLN transgelin 1.65078
SMAD3 SMAD family member 3 1.64538
MYH9 myosin, heavy chain 9, non-muscle 1.63588
TRAM2 translocation associated membrane protein 2 1.63184
BDKRB2 bradykinin receptor B2 1.62808
THBS1 thrombospondin 1 1.60905
ATP10D ATPase, class V, type 10D 1.58774
THBS2 thrombospondin 2 1.58765
TRHDE thyrotropin-releasing hormone degrading enzyme 1.58334
SMTN smoothelin 1.57961
RCAN2 regulator of calcineurin 2 1.55672
PIP5K1C phosphatidylinositol-4-phosphate 5-kinase, type I, gamma 1.54348
CNN2 calponin 2 1.54248
GLB1L galactosidase, beta 1-like 1.53683
EMILIN1 elastin microfibril interfacer 1 1.52555
EFEMP2 EGF containing fibulin-like extracellular matrix protein 2 1.51599
ENG endoglin 1.513
COLEC12 collectin sub-family member 12 1.51162
ARHGAP22 Rho GTPase activating protein 22 1.50742
ZYX zyxin 1.5052
COL13A1 collagen, type XIII, alpha 1 1.50448
MGAT1 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 1.49646
DNMBP dynamin binding protein 1.4947
FRMD4A FERM domain containing 4A 1.48518
PDGFRB platelet-derived growth factor receptor, beta polypeptide 1.4845
TGM2 transglutaminase 2 1.4757
PKD2 polycystic kidney disease 2 (autosomal dominant) 1.46933
FLT1 fms-related tyrosine kinase 1 1.45085
PAPPA pregnancy-associated plasma protein A, pappalysin 1 1.44631
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein 1.44388
PRKCDBP protein kinase C, delta binding protein 1.44048
RCN3 reticulocalbin 3, EF-hand calcium binding domain 1.43641
MYL9 myosin, light chain 9, regulatory 1.42858
MFAP2 microfibrillar-associated protein 2 1.42354
ESM1 endothelial cell-specific molecule 1 1.41823

low expression

Symbol Name Standardized Value
ACTR3B ARP3 actin-related protein 3 homolog B (yeast) -3.53725
EML4 echinoderm microtubule associated protein like 4 -3.53529
RAB9BP1 RAB9B, member RAS oncogene family pseudogene 1 -3.09198
IPCEF1 interaction protein for cytohesin exchange factors 1 -2.91002
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 -2.8855
ZNF480 zinc finger protein 480 -2.87416
SEC14L5 SEC14-like 5 (S. cerevisiae) -2.78553
AMBP alpha-1-microglobulin/bikunin precursor -2.69367
IL23A interleukin 23, alpha subunit p19 -2.46497
PARD6A par-6 family cell polarity regulator alpha -2.42759
IL36A interleukin 36, alpha -2.35139
RFX3 regulatory factor X, 3 (influences HLA class II expression) -2.33488
SCGB1A1 secretoglobin, family 1A, member 1 (uteroglobin) -2.32701
PTPRCAP protein tyrosine phosphatase, receptor type, C-associated protein -2.30897
ACSL6 acyl-CoA synthetase long-chain family member 6 -2.27682
LAMC3 laminin, gamma 3 -2.21182
EAF2 ELL associated factor 2 -2.15567
NSUN7 NOP2/Sun domain family, member 7 -2.12415
RPRM reprimo, TP53 dependent G2 arrest mediator candidate -2.03071
FRMD1 FERM domain containing 1 -2.03011
PLCB2 phospholipase C, beta 2 -2.00161
FSHB follicle stimulating hormone, beta polypeptide -1.9978
LHCGR luteinizing hormone/choriogonadotropin receptor -1.98781
ADAM20 ADAM metallopeptidase domain 20 -1.97419
SIGLEC5 sialic acid binding Ig-like lectin 5 -1.95901
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 -1.95376
HIST1H2BO histone cluster 1, H2bo -1.95305
CD3G CD3g molecule, gamma (CD3-TCR complex) -1.94668
ABCC9 ATP-binding cassette, sub-family C (CFTR/MRP), member 9 -1.89997
CDK18 cyclin-dependent kinase 18 -1.89313
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -1.88611
LRPPRC leucine-rich pentatricopeptide repeat containing -1.87303
FXYD3 FXYD domain containing ion transport regulator 3 -1.85803
ACTN2 actinin, alpha 2 -1.8498
SPAM1 sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding) -1.83834
IKZF5 IKAROS family zinc finger 5 (Pegasus) -1.83592
KIR3DL2 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2 -1.82245
FCGR1A Fc fragment of IgG, high affinity Ia, receptor (CD64) -1.81937
SPINK2 serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor) -1.79602
CCAR2 cell cycle and apoptosis regulator 2 -1.7931
PCSK5 proprotein convertase subtilisin/kexin type 5 -1.78845
MAGEF1 melanoma antigen family F1 -1.7879
ELP3 elongator acetyltransferase complex subunit 3 -1.78176
BAIAP2L2 BAI1-associated protein 2-like 2 -1.77663
ZSCAN32 zinc finger and SCAN domain containing 32 -1.77634
IGSF9B immunoglobulin superfamily, member 9B -1.77427
CCDC82 coiled-coil domain containing 82 -1.77301
PNMT phenylethanolamine N-methyltransferase -1.76932
ZIC3 Zic family member 3 -1.76754
HAP1 huntingtin-associated protein 1 -1.76489
DDX43 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 -1.76001
EFNA3 ephrin-A3 -1.74766
EXOC6B exocyst complex component 6B -1.73691
C8G complement component 8, gamma polypeptide -1.73348
GHSR growth hormone secretagogue receptor -1.72997
MLLT1 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 -1.72823
CCDC51 coiled-coil domain containing 51 -1.71479
FGF6 fibroblast growth factor 6 -1.71031
AVIL advillin -1.70638
GDPD3 glycerophosphodiester phosphodiesterase domain containing 3 -1.69856
IL2RA interleukin 2 receptor, alpha -1.69807
LHX5 LIM homeobox 5 -1.69799
ACSM3 acyl-CoA synthetase medium-chain family member 3 -1.69679
LRP2 low density lipoprotein receptor-related protein 2 -1.68991
SAMHD1 SAM domain and HD domain 1 -1.68962
MED31 mediator complex subunit 31 -1.67841
HIST1H2BB histone cluster 1, H2bb -1.67207
APOBEC1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 -1.66937
RPS6KA1 ribosomal protein S6 kinase, 90kDa, polypeptide 1 -1.66638
PTENP1 phosphatase and tensin homolog pseudogene 1 (functional) -1.66608
SMPDL3B sphingomyelin phosphodiesterase, acid-like 3B -1.65598
SEMA7A semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group) -1.63488
ADCY1 adenylate cyclase 1 (brain) -1.62698
SULT2A1 sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1 -1.62374
RGS9 regulator of G-protein signaling 9 -1.61985
DLGAP2 discs, large (Drosophila) homolog-associated protein 2 -1.60446
GCKR glucokinase (hexokinase 4) regulator -1.60362
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 -1.59557
SIT1 signaling threshold regulating transmembrane adaptor 1 -1.59309
CABP2 calcium binding protein 2 -1.59298
VGLL1 vestigial-like family member 1 -1.59165
IARS isoleucyl-tRNA synthetase -1.58958
BFSP2 beaded filament structural protein 2, phakinin -1.58443
CNTN1 contactin 1 -1.57947
KRT35 keratin 35, type I -1.57857
PITX3 paired-like homeodomain 3 -1.5721
NFIB nuclear factor I/B -1.56628
CYP2F1 cytochrome P450, family 2, subfamily F, polypeptide 1 -1.5656
B3GAT1 beta-1,3-glucuronyltransferase 1 -1.56326
SYT5 synaptotagmin V -1.55671
BSN bassoon presynaptic cytomatrix protein -1.55647
OVOL1 ovo-like zinc finger 1 -1.55246
BANK1 B-cell scaffold protein with ankyrin repeats 1 -1.5377
SOX10 SRY (sex determining region Y)-box 10 -1.53658
KCNK13 potassium channel, two pore domain subfamily K, member 13 -1.53467
DDC dopa decarboxylase (aromatic L-amino acid decarboxylase) -1.52679
KCNAB3 potassium channel, voltage gated subfamily A regulatory beta subunit 3 -1.52226
RXFP3 relaxin/insulin-like family peptide receptor 3 -1.52086
FGF18 fibroblast growth factor 18 -1.51402
APLNR apelin receptor -1.51376
IL20RA interleukin 20 receptor, alpha -1.51249
ARSA arylsulfatase A -1.51012
CCDC64 coiled-coil domain containing 64 -1.50377
NUS1P3 nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) pseudogene 3 -1.50176
TMEM92 transmembrane protein 92 -1.48804
CYB5R4 cytochrome b5 reductase 4 -1.48705
ZNF263 zinc finger protein 263 -1.48259
GPRC5C G protein-coupled receptor, class C, group 5, member C -1.48125
PLAGL2 pleiomorphic adenoma gene-like 2 -1.47698
USP11 ubiquitin specific peptidase 11 -1.47036
XK X-linked Kx blood group -1.46913
STAR steroidogenic acute regulatory protein -1.46872
RPL30 ribosomal protein L30 -1.46228
PHF7 PHD finger protein 7 -1.46162
CDH22 cadherin 22, type 2 -1.46082
OTOF otoferlin -1.45938
PPP1R3C protein phosphatase 1, regulatory subunit 3C -1.45765
CXCL5 chemokine (C-X-C motif) ligand 5 -1.45521
CAPG capping protein (actin filament), gelsolin-like -1.45397
HSPD1 heat shock 60kDa protein 1 (chaperonin) -1.44623
GYPA glycophorin A (MNS blood group) -1.44598
TMEM57 transmembrane protein 57 -1.44182
TLE6 transducin-like enhancer of split 6 -1.44116
EPPK1 epiplakin 1 -1.43875
GIMAP4 GTPase, IMAP family member 4 -1.43739
STXBP2 syntaxin binding protein 2 -1.43329
PSPN persephin -1.43138
HAVCR1 hepatitis A virus cellular receptor 1 -1.42816
HMX1 H6 family homeobox 1 -1.42511
AK2 adenylate kinase 2 -1.42233
PPFIA2 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 -1.41759
CALY calcyon neuron-specific vesicular protein -1.41685