Salicylic acid_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Salicylic acid perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Salicylic acid_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SAMD4A sterile alpha motif domain containing 4A 0.160514
FN1 fibronectin 1 0.13127
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.107345
PDLIM5 PDZ and LIM domain 5 0.0997761
DSPP dentin sialophosphoprotein 0.0968495
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0916514
FAM107B family with sequence similarity 107, member B 0.0886694
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0809826
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0787007
FBF1 Fas (TNFRSF6) binding factor 1 0.0756668
C3 complement component 3 0.0734441
TNS1 tensin 1 0.0734279
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0734031
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0640092
MACF1 microtubule-actin crosslinking factor 1 0.0633406
INTS6 integrator complex subunit 6 0.0628747
MBNL2 muscleblind-like splicing regulator 2 0.0603908
ERRFI1 ERBB receptor feedback inhibitor 1 0.0588671
TF transferrin 0.057811
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 0.0549993
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.054369
VEGFA vascular endothelial growth factor A 0.0532912
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0530209
SDC4 syndecan 4 0.0529971
SVIL supervillin 0.0498952
NKD1 naked cuticle homolog 1 (Drosophila) 0.0444515
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.0442956
PEG3 paternally expressed 3 0.0441031
EEF2 eukaryotic translation elongation factor 2 0.0423279
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0403708
EXT1 exostosin glycosyltransferase 1 0.0391137
MYO1E myosin IE 0.0388028
DSCAM Down syndrome cell adhesion molecule 0.0384315
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0368634
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0363742
FAT1 FAT atypical cadherin 1 0.036219
SMAD3 SMAD family member 3 0.0360894
TCIM transcriptional and immune response regulator 0.0358151
SEPTIN9 septin 9 0.035274
ATXN1 ataxin 1 0.0351777
GK glycerol kinase 0.0346423
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 0.0346185
TNS3 tensin 3 0.0345835
RAD51B RAD51 paralog B 0.0341962
LMCD1 LIM and cysteine-rich domains 1 0.033959
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0338705
TMEM181 transmembrane protein 181 0.0333583
CCNY cyclin Y 0.0333168
VMP1 vacuole membrane protein 1 0.033066
SYNE1 spectrin repeat containing, nuclear envelope 1 0.0330095
ATF3 activating transcription factor 3 0.0327914
SHB Src homology 2 domain containing adaptor protein B 0.0327292
AFF1 AF4/FMR2 family, member 1 0.0322833
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0318761
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0317932
A2M alpha-2-macroglobulin 0.0317917
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.031102
ADARB1 adenosine deaminase, RNA-specific, B1 0.0309449
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0301607
MCL1 myeloid cell leukemia 1 0.0295345
TBCK TBC1 domain containing kinase 0.02945
PLEC plectin 0.0294046
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0289704
ZNF638 zinc finger protein 638 0.028946
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0288322
SERTAD2 SERTA domain containing 2 0.0287717
CLIC4 chloride intracellular channel 4 0.0283431
GMDS GDP-mannose 4,6-dehydratase 0.0280924
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0279601
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0273887
APOB apolipoprotein B 0.0271662
PHF3 PHD finger protein 3 0.0270605
BRD4 bromodomain containing 4 0.0268827
FOXP1 forkhead box P1 0.0268452
EIF4B eukaryotic translation initiation factor 4B 0.0264412
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0263725
CRY1 cryptochrome circadian clock 1 0.0259473
IGF1R insulin-like growth factor 1 receptor 0.0253933
MYH9 myosin, heavy chain 9, non-muscle 0.0252715
PPARD peroxisome proliferator-activated receptor delta 0.0252036
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.0249586
LPP LIM domain containing preferred translocation partner in lipoma 0.0241623
COL7A1 collagen, type VII, alpha 1 0.0240475
HSPA8 heat shock 70kDa protein 8 0.0238496
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0238325
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0237532
UGDH UDP-glucose 6-dehydrogenase 0.0236669
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.023641
TUFT1 tuftelin 1 0.0232999
HDAC4 histone deacetylase 4 0.0228959
STK17A serine/threonine kinase 17a 0.0228938
SDC2 syndecan 2 0.0227809
APLP2 amyloid beta (A4) precursor-like protein 2 0.0226671
CANX calnexin 0.022516
DUSP6 dual specificity phosphatase 6 0.0224432
SORBS1 sorbin and SH3 domain containing 1 0.0223367
IQSEC1 IQ motif and Sec7 domain 1 0.0222031
ARHGAP26 Rho GTPase activating protein 26 0.0221904
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0219116
DNAH17 dynein, axonemal, heavy chain 17 0.0217793

decreased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 -0.160197
TPT1 tumor protein, translationally-controlled 1 -0.136751
IGF2 insulin-like growth factor 2 -0.0942188
MT2A metallothionein 2A -0.0923146
RPS6 ribosomal protein S6 -0.0881207
FNDC3B fibronectin type III domain containing 3B -0.085369
APOA2 apolipoprotein A-II -0.0805717
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -0.0783694
SLC38A2 solute carrier family 38, member 2 -0.0713498
TMSB10 thymosin beta 10 -0.0704693
RPS24 ribosomal protein S24 -0.0604993
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0604658
RPL37A ribosomal protein L37a -0.056517
RPL35A ribosomal protein L35a -0.0548118
TM4SF1 transmembrane 4 L six family member 1 -0.0500812
HMGA1 high mobility group AT-hook 1 -0.0495376
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0475811
ZMYND8 zinc finger, MYND-type containing 8 -0.0473511
RPLP0 ribosomal protein, large, P0 -0.0456942
RPS8 ribosomal protein S8 -0.0446835
RPL9 ribosomal protein L9 -0.0443647
PLIN2 perilipin 2 -0.0437052
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0436918
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0435762
RPLP1 ribosomal protein, large, P1 -0.0434346
RPLP2 ribosomal protein, large, P2 -0.0415317
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.040346
SESTD1 SEC14 and spectrin domains 1 -0.0396555
PERP PERP, TP53 apoptosis effector -0.0389896
OSMR oncostatin M receptor -0.038786
FRMD5 FERM domain containing 5 -0.0385435
ENO1 enolase 1, (alpha) -0.0377084
CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1 -0.0373801
EML4 echinoderm microtubule associated protein like 4 -0.0373241
RPL34 ribosomal protein L34 -0.0370811
RPS12 ribosomal protein S12 -0.036432
S100A9 S100 calcium binding protein A9 -0.036136
IFI6 interferon, alpha-inducible protein 6 -0.0352747
FTL ferritin, light polypeptide -0.0343859
RPS29 ribosomal protein S29 -0.0338816
RPS27A ribosomal protein S27a -0.0325799
RBM25 RNA binding motif protein 25 -0.03245
GDF15 growth differentiation factor 15 -0.0316523
RPS21 ribosomal protein S21 -0.0307364
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0303407
RTN4 reticulon 4 -0.0298119
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform -0.0297198
RPL36 ribosomal protein L36 -0.0296405
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0288655
IFITM1 interferon induced transmembrane protein 1 -0.028792
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0287789
RPS19 ribosomal protein S19 -0.0284681
TPM4 tropomyosin 4 -0.028384
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0280968
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0277952
PTMA prothymosin, alpha -0.0274379
RPL12 ribosomal protein L12 -0.0272563
GNAQ guanine nucleotide binding protein (G protein), q polypeptide -0.0272049
RPS14 ribosomal protein S14 -0.0264131
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0262343
GPAM glycerol-3-phosphate acyltransferase, mitochondrial -0.0262278
NPEPPS aminopeptidase puromycin sensitive -0.0257089
ELL2 elongation factor, RNA polymerase II, 2 -0.0252532
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0250105
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0247227
KDM3A lysine (K)-specific demethylase 3A -0.0246943
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0245509
SOX4 SRY (sex determining region Y)-box 4 -0.0245396
MRTFA myocardin related transcription factor A -0.0242333
RAB6A RAB6A, member RAS oncogene family -0.0241769
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0240644
RPL31 ribosomal protein L31 -0.0240004
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0239245
LYZ lysozyme -0.023872
FERMT1 fermitin family member 1 -0.0238694
RPL26 ribosomal protein L26 -0.0237489
TCERG1 transcription elongation regulator 1 -0.0237249
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0236477
CRLS1 cardiolipin synthase 1 -0.023539
ARHGAP5 Rho GTPase activating protein 5 -0.0233967
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0232568
APOC1 apolipoprotein C-I -0.0232213
ANKRD12 ankyrin repeat domain 12 -0.0230757
RPL36A ribosomal protein L36a -0.022815
EGR1 early growth response 1 -0.022679
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0224911
RPL23 ribosomal protein L23 -0.022412
WDR45B WD repeat domain 45B -0.0222065
NRIP1 nuclear receptor interacting protein 1 -0.0220557
RPS10 ribosomal protein S10 -0.0219901
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0219525
WSB1 WD repeat and SOCS box containing 1 -0.021713
PDIA3 protein disulfide isomerase family A, member 3 -0.0216152
S100A6 S100 calcium binding protein A6 -0.021085
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.021052
ARHGEF18 Rho/Rac guanine nucleotide exchange factor (GEF) 18 -0.0210243
RPL37 ribosomal protein L37 -0.0209568
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0208206
NUP58 nucleoporin 58 -0.0208128
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 -0.0208075