Salicylic acid_RPMI-7951 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Salicylic acid perturbation in RPMI-7951 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Salicylic acid_RPMI-7951 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SMAD3 SMAD family member 3 0.0956696
VEGFA vascular endothelial growth factor A 0.0771666
MYH9 myosin, heavy chain 9, non-muscle 0.0712889
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0701299
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0663715
NRIP1 nuclear receptor interacting protein 1 0.0624163
DSCAM Down syndrome cell adhesion molecule 0.0592837
MSN moesin 0.0584899
PDLIM5 PDZ and LIM domain 5 0.0558291
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0524226
COL7A1 collagen, type VII, alpha 1 0.0520584
WWTR1 WW domain containing transcription regulator 1 0.0515388
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.048254
KMT2E lysine (K)-specific methyltransferase 2E 0.0472211
NAV2 neuron navigator 2 0.0469992
EXT1 exostosin glycosyltransferase 1 0.0465648
RUNX1 runt-related transcription factor 1 0.0452073
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0450037
COL5A3 collagen, type V, alpha 3 0.0443522
CLIC4 chloride intracellular channel 4 0.0441546
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.043195
GLS2 glutaminase 2 (liver, mitochondrial) 0.0426474
HDAC9 histone deacetylase 9 0.0404594
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0395457
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0391416
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.0388758
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0384916
FAT1 FAT atypical cadherin 1 0.0379741
SVIL supervillin 0.0375212
ZSWIM6 zinc finger, SWIM-type containing 6 0.0374727
ZNF644 zinc finger protein 644 0.036853
TGM2 transglutaminase 2 0.0358661
NPTN neuroplastin 0.0357275
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0353349
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0351222
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0341621
JARID2 jumonji, AT rich interactive domain 2 0.0335966
CORO1C coronin, actin binding protein, 1C 0.0333614
AFDN afadin, adherens junction formation factor 0.0331367
BHLHE40 basic helix-loop-helix family, member e40 0.0326334
HPCAL1 hippocalcin-like 1 0.0326142
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0326096
CD44 CD44 molecule (Indian blood group) 0.0323531
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0323349
SETD5 SET domain containing 5 0.0317816
SMC4 structural maintenance of chromosomes 4 0.03133
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0312798
MKI67 marker of proliferation Ki-67 0.0306726
NCOA3 nuclear receptor coactivator 3 0.0306018
MED13L mediator complex subunit 13-like 0.0305137
FNDC3B fibronectin type III domain containing 3B 0.0300931
RLIM ring finger protein, LIM domain interacting 0.0300359
USP9X ubiquitin specific peptidase 9, X-linked 0.0297435
CCNL1 cyclin L1 0.0293579
VCL vinculin 0.0292658
RBM39 RNA binding motif protein 39 0.0289897
ACTN1 actinin, alpha 1 0.0289155
TRIO trio Rho guanine nucleotide exchange factor 0.0281566
XPO1 exportin 1 0.0281468
CENPF centromere protein F, 350/400kDa 0.0279854
ELL2 elongation factor, RNA polymerase II, 2 0.0279686
ADAM17 ADAM metallopeptidase domain 17 0.0279479
APP amyloid beta (A4) precursor protein 0.0276137
ANXA2 annexin A2 0.0275546
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0275083
ACTN4 actinin, alpha 4 0.0271355
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.027098
TPX2 TPX2, microtubule-associated 0.026471
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0264291
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0260808
HSPA8 heat shock 70kDa protein 8 0.0260489
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0256326
FERMT2 fermitin family member 2 0.0255648
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0255455
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0253915
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0252646
TBC1D5 TBC1 domain family, member 5 0.0249189
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0248535
SEPTIN9 septin 9 0.0248492
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 0.02481
BRD2 bromodomain containing 2 0.0247614
UBE2H ubiquitin-conjugating enzyme E2H 0.0247333
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0246255
SDC4 syndecan 4 0.0242542
TENT2 terminal nucleotidyltransferase 2 0.0239777
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0235988
PLEC plectin 0.0235071
RAD23B RAD23 homolog B (S. cerevisiae) 0.02335
ITGAV integrin, alpha V 0.0233449
CPEB2 cytoplasmic polyadenylation element binding protein 2 0.0232873
LMO7 LIM domain 7 0.0232613
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0232472
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0231159
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0230973
FNIP1 folliculin interacting protein 1 0.0230822
BCAR3 breast cancer anti-estrogen resistance 3 0.0229836
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0229595
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0228539
TOP1 topoisomerase (DNA) I 0.0227885
MACF1 microtubule-actin crosslinking factor 1 0.0227797

decreased expression

Symbol Name Standardized Value
COL1A1 collagen, type I, alpha 1 -0.149178
VIM vimentin -0.146922
CDH13 cadherin 13 -0.122446
FN1 fibronectin 1 -0.118601
NDRG1 N-myc downstream regulated 1 -0.115999
PSD3 pleckstrin and Sec7 domain containing 3 -0.111559
STC1 stanniocalcin 1 -0.100433
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0999272
B2M beta-2-microglobulin -0.0949446
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0932076
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0927438
COL1A2 collagen, type I, alpha 2 -0.089555
TMSB10 thymosin beta 10 -0.0887866
MMP12 matrix metallopeptidase 12 -0.0868591
CEMIP cell migration inducing protein, hyaluronan binding -0.0859833
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0839405
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0806423
TFPI2 tissue factor pathway inhibitor 2 -0.0788028
FTL ferritin, light polypeptide -0.0766537
IL1B interleukin 1, beta -0.0757394
EML5 echinoderm microtubule associated protein like 5 -0.0737468
HLA-A major histocompatibility complex, class I, A -0.0665103
PDIA3 protein disulfide isomerase family A, member 3 -0.0609237
IFI6 interferon, alpha-inducible protein 6 -0.0581306
INHBA inhibin, beta A -0.0576061
TGFBI transforming growth factor, beta-induced, 68kDa -0.0574732
ZMYND8 zinc finger, MYND-type containing 8 -0.0552599
PDE4D phosphodiesterase 4D, cAMP-specific -0.054164
HLA-B major histocompatibility complex, class I, B -0.0539727
TPM4 tropomyosin 4 -0.050996
RAI14 retinoic acid induced 14 -0.0494361
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0489815
GLIS3 GLIS family zinc finger 3 -0.0486958
CA12 carbonic anhydrase XII -0.0454647
FRMD4A FERM domain containing 4A -0.0454605
MTSS1 metastasis suppressor 1 -0.0454087
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0450223
GRB10 growth factor receptor-bound protein 10 -0.0442788
TPT1 tumor protein, translationally-controlled 1 -0.0438561
NAMPT nicotinamide phosphoribosyltransferase -0.0432831
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0430272
APCDD1L adenomatosis polyposis coli down-regulated 1-like -0.0426013
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.041263
TPM1 tropomyosin 1 (alpha) -0.0406144
HM13 histocompatibility (minor) 13 -0.0405724
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0402211
COL6A2 collagen, type VI, alpha 2 -0.0396581
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0379525
OXR1 oxidation resistance 1 -0.0377456
GNAS GNAS complex locus -0.0376469
WNT5A wingless-type MMTV integration site family, member 5A -0.0376199
ZEB1 zinc finger E-box binding homeobox 1 -0.0371832
RPLP1 ribosomal protein, large, P1 -0.0353627
F3 coagulation factor III (thromboplastin, tissue factor) -0.0346008
IFI16 interferon, gamma-inducible protein 16 -0.0345685
BTG1 B-cell translocation gene 1, anti-proliferative -0.0337951
FTH1 ferritin, heavy polypeptide 1 -0.0337078
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0337045
IFITM3 interferon induced transmembrane protein 3 -0.0336344
ACTG1 actin gamma 1 -0.0334496
CLMP CXADR-like membrane protein -0.0332301
FBN1 fibrillin 1 -0.0332194
RND3 Rho family GTPase 3 -0.0321651
SLIT2 slit homolog 2 (Drosophila) -0.0318886
KCNMB3 potassium channel subfamily M regulatory beta subunit 3 -0.0316539
VCAN versican -0.0315965
RFX8 RFX family member 8, lacking RFX DNA binding domain -0.0315476
POU2F2 POU class 2 homeobox 2 -0.0312526
HLA-E major histocompatibility complex, class I, E -0.0307968
PTMA prothymosin, alpha -0.0305892
SYNDIG1 synapse differentiation inducing 1 -0.0300921
EGFR epidermal growth factor receptor -0.0295598
BICC1 BicC family RNA binding protein 1 -0.0292302
IER3 immediate early response 3 -0.0288653
ARL4C ADP-ribosylation factor-like 4C -0.0287953
FAM107B family with sequence similarity 107, member B -0.0287857
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0287276
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0286125
SOX5 SRY (sex determining region Y)-box 5 -0.0284714
XAF1 XIAP associated factor 1 -0.0282947
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 -0.0282483
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0278319
MARCKS myristoylated alanine-rich protein kinase C substrate -0.027816
NRP1 neuropilin 1 -0.0277145
DNAAF9 dynein axonemal assembly factor 9 -0.0276745
ZBTB20 zinc finger and BTB domain containing 20 -0.027665
SERPINH1 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) -0.0275336
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0274053
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0273858
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) -0.027082
TNS3 tensin 3 -0.0270582
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0264454
NREP neuronal regeneration related protein -0.0263398
TWIST2 twist family bHLH transcription factor 2 -0.0262797
CADM1 cell adhesion molecule 1 -0.0260091
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0256728
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0256221
CST3 cystatin C -0.0255598
CAVIN1 caveolae associated protein 1 -0.0253515
S100A10 S100 calcium binding protein A10 -0.0251524