Saquinavir_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Saquinavir perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Saquinavir_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MT2A metallothionein 2A 0.15723
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0886592
CD44 CD44 molecule (Indian blood group) 0.0879364
VIM vimentin 0.0715205
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0671239
PALM2AKAP2 PALM2 and AKAP2 fusion 0.057696
PRELID2 PRELI domain containing 2 0.0562902
RHOBTB3 Rho-related BTB domain containing 3 0.0541413
VCL vinculin 0.0526053
LDHA lactate dehydrogenase A 0.0500991
FNDC3B fibronectin type III domain containing 3B 0.0493555
FBXL7 F-box and leucine-rich repeat protein 7 0.0482107
HDAC9 histone deacetylase 9 0.0472682
GLIS3 GLIS family zinc finger 3 0.0460523
ERBIN erbb2 interacting protein 0.0458117
EFNA5 ephrin-A5 0.0453902
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0450702
NAV2 neuron navigator 2 0.0447939
DOCK5 dedicator of cytokinesis 5 0.0436841
EXT1 exostosin glycosyltransferase 1 0.043439
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.042784
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0426994
EGFR epidermal growth factor receptor 0.042394
DST dystonin 0.0419499
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0414634
STC1 stanniocalcin 1 0.0407588
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0406971
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0400246
NEK7 NIMA-related kinase 7 0.0393706
SMYD3 SET and MYND domain containing 3 0.0383186
CALR calreticulin 0.0372655
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0365785
ASPH aspartate beta-hydroxylase 0.03608
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0359338
RASA2 RAS p21 protein activator 2 0.0354728
ATXN1 ataxin 1 0.0347759
PTK2 protein tyrosine kinase 2 0.0346216
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0339039
MB21D2 Mab-21 domain containing 2 0.0335621
CDH13 cadherin 13 0.0335378
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.033186
RPS3 ribosomal protein S3 0.0329704
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.032683
RASAL2 RAS protein activator like 2 0.0320063
TPT1 tumor protein, translationally-controlled 1 0.0319005
RUNX1 runt-related transcription factor 1 0.0317716
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0315525
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.031355
FLNB filamin B, beta 0.0310813
NAP1L1 nucleosome assembly protein 1-like 1 0.0302764
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 0.0296989
BACE2 beta-site APP-cleaving enzyme 2 0.0294194
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0291684
PDLIM5 PDZ and LIM domain 5 0.0290112
EHBP1 EH domain binding protein 1 0.028753
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.028556
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0283434
ZFAND3 zinc finger, AN1-type domain 3 0.0280314
PBX3 pre-B-cell leukemia homeobox 3 0.0278695
IFI6 interferon, alpha-inducible protein 6 0.0278617
DNMBP dynamin binding protein 0.0278198
IRF2BP2 interferon regulatory factor 2 binding protein 2 0.0278168
SP100 SP100 nuclear antigen 0.0277231
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0274293
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0268899
SVIL supervillin 0.0267454
PSD3 pleckstrin and Sec7 domain containing 3 0.0265793
INTS6 integrator complex subunit 6 0.026519
ZEB1 zinc finger E-box binding homeobox 1 0.0264848
PARD3 par-3 family cell polarity regulator 0.0263357
HS3ST3A1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 0.026123
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0258184
LPP LIM domain containing preferred translocation partner in lipoma 0.0257496
RABGAP1L RAB GTPase activating protein 1-like 0.0257487
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0257248
NAV1 neuron navigator 1 0.0257134
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0255767
CSNK1A1 casein kinase 1, alpha 1 0.025262
KLF6 Kruppel-like factor 6 0.0250704
TRPC1 transient receptor potential cation channel, subfamily C, member 1 0.0242799
RRM2 ribonucleotide reductase M2 0.0242582
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0242566
SMAD3 SMAD family member 3 0.0241274
MIB1 mindbomb E3 ubiquitin protein ligase 1 0.0235732
TGFBR1 transforming growth factor, beta receptor 1 0.0235652
MBNL2 muscleblind-like splicing regulator 2 0.0234375
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0233548
MYO9A myosin IXA 0.0232225
SBF2 SET binding factor 2 0.023173
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0230869
CDK13 cyclin-dependent kinase 13 0.0229548
FER fer (fps/fes related) tyrosine kinase 0.0227498
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0226311
APP amyloid beta (A4) precursor protein 0.0226229
DCAF6 DDB1 and CUL4 associated factor 6 0.0226102
MYOF myoferlin 0.0222734
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0219725
DPYSL2 dihydropyrimidinase-like 2 0.0218514
JMJD1C jumonji domain containing 1C 0.021849
DUSP6 dual specificity phosphatase 6 0.0218002

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.313405
AKAP12 A kinase (PRKA) anchor protein 12 -0.265414
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.129559
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.10674
FN1 fibronectin 1 -0.100868
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0991354
ABI3BP ABI family, member 3 (NESH) binding protein -0.0845102
SUCNR1 succinate receptor 1 -0.0832344
MAP1B microtubule-associated protein 1B -0.0701911
POTEF POTE ankyrin domain family, member F -0.0695863
TMSB10 thymosin beta 10 -0.0688049
PDIA3 protein disulfide isomerase family A, member 3 -0.06227
S100A10 S100 calcium binding protein A10 -0.0600909
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0544031
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0534456
COL1A2 collagen, type I, alpha 2 -0.0533157
SLC38A1 solute carrier family 38, member 1 -0.0532876
COL5A1 collagen, type V, alpha 1 -0.0528192
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.051917
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.050275
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0492768
DLG1 discs, large homolog 1 (Drosophila) -0.0489077
DIRAS3 DIRAS family, GTP-binding RAS-like 3 -0.0488106
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0486924
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0476897
THBS2 thrombospondin 2 -0.04675
CSTB cystatin B (stefin B) -0.0452942
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0424474
COL8A1 collagen, type VIII, alpha 1 -0.0420065
KRT81 keratin 81, type II -0.0414268
GARS1 glycyl-tRNA synthetase 1 -0.0397412
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0396185
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0374765
LRRC17 leucine rich repeat containing 17 -0.0374069
IL7R interleukin 7 receptor -0.0372156
LMNA lamin A/C -0.0371941
GOLGA4 golgin A4 -0.0359415
COL1A1 collagen, type I, alpha 1 -0.0351576
SPDL1 spindle apparatus coiled-coil protein 1 -0.0342663
CD99 CD99 molecule -0.033796
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.033581
FOSL1 FOS-like antigen 1 -0.0328573
MRPS6 mitochondrial ribosomal protein S6 -0.0326357
CANX calnexin -0.0316515
MEIS2 Meis homeobox 2 -0.031282
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0311535
COL6A1 collagen, type VI, alpha 1 -0.0304413
LAMB1 laminin, beta 1 -0.0298564
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0293874
MSI2 musashi RNA-binding protein 2 -0.0292527
TPM4 tropomyosin 4 -0.0289731
DCLK2 doublecortin-like kinase 2 -0.027958
COL5A2 collagen, type V, alpha 2 -0.0278925
SORBS2 sorbin and SH3 domain containing 2 -0.0276843
LY6E lymphocyte antigen 6 complex, locus E -0.0273941
COL3A1 collagen, type III, alpha 1 -0.0273033
TAGLN2 transgelin 2 -0.0271827
ZMYND8 zinc finger, MYND-type containing 8 -0.0269105
TUBB tubulin, beta class I -0.026821
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0265821
GOLGB1 golgin B1 -0.0265634
CCND1 cyclin D1 -0.0264456
RPL35A ribosomal protein L35a -0.0259748
LOC112694756 uncharaterized LOC112694756 -0.0253234
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0249126
HLA-B major histocompatibility complex, class I, B -0.0248009
ANKRD11 ankyrin repeat domain 11 -0.0244361
HSPB1 heat shock 27kDa protein 1 -0.0244102
OASL 2'-5'-oligoadenylate synthetase-like -0.0242707
FLT1 fms-related tyrosine kinase 1 -0.0240611
IGFBP6 insulin-like growth factor binding protein 6 -0.0238508
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0234739
LOX lysyl oxidase -0.0233423
RRBP1 ribosome binding protein 1 -0.0229043
HLA-C major histocompatibility complex, class I, C -0.0228735
SAMD9 sterile alpha motif domain containing 9 -0.0226031
CDC42EP3 CDC42 effector protein (Rho GTPase binding) 3 -0.0225019
LOXL2 lysyl oxidase-like 2 -0.022133
BHLHE40 basic helix-loop-helix family, member e40 -0.0220894
KIF5B kinesin family member 5B -0.0220775
PTMA prothymosin, alpha -0.0219203
PRSS23 protease, serine, 23 -0.0216999
PLAT plasminogen activator, tissue -0.0213015
TUBB4B tubulin, beta 4B class IVb -0.0212619
WARS1 tryptophanyl-tRNA synthetase 1 -0.0211567
MX2 MX dynamin-like GTPase 2 -0.0208019
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0206122
SH3KBP1 SH3-domain kinase binding protein 1 -0.0204089
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0200974
TPM1 tropomyosin 1 (alpha) -0.0200493
S100A9 S100 calcium binding protein A9 -0.0199455
TGFB1 transforming growth factor, beta 1 -0.0197206
TENT5A terminal nucleotidyltransferase 5A -0.0196166
GLG1 golgi glycoprotein 1 -0.0193242
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0190037
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0190036
CALU calumenin -0.0183611
ACTG1 actin gamma 1 -0.0180776
ADM adrenomedullin -0.0178187
PODXL podocalyxin-like -0.017334