Saquinavir_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Saquinavir perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Saquinavir_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.154292
B2M beta-2-microglobulin 0.0859947
SLTM SAFB-like, transcription modulator 0.0778692
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0723407
KRT17 keratin 17, type I 0.0699256
ARHGAP21 Rho GTPase activating protein 21 0.0691442
LMO7 LIM domain 7 0.0668723
LAMB3 laminin, beta 3 0.0665432
EGFR epidermal growth factor receptor 0.0641945
TXNRD1 thioredoxin reductase 1 0.0640473
LAMA4 laminin, alpha 4 0.0603385
OGA O-GlcNAcase 0.0602021
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0557752
ARHGAP5 Rho GTPase activating protein 5 0.0556253
KYNU kynureninase 0.054539
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0512525
ASPH aspartate beta-hydroxylase 0.0505747
EZR ezrin 0.0488309
DOCK5 dedicator of cytokinesis 5 0.0481224
TXNIP thioredoxin interacting protein 0.0477681
ISG15 ISG15 ubiquitin-like modifier 0.0472828
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0439988
TPT1 tumor protein, translationally-controlled 1 0.0428855
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0421337
HMGA2 high mobility group AT-hook 2 0.0420211
CLTC clathrin, heavy chain (Hc) 0.0418362
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0415794
MIMS1 mitochondrial inner membrane scaffold 1 0.041372
FNDC3A fibronectin type III domain containing 3A 0.0412557
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0408051
FAM13A family with sequence similarity 13, member A 0.0407775
NRG1 neuregulin 1 0.0407377
ESYT2 extended synaptotagmin-like protein 2 0.040709
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0406438
RAD51B RAD51 paralog B 0.0398558
BRWD3 bromodomain and WD repeat domain containing 3 0.0397355
FRMD5 FERM domain containing 5 0.0394063
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0378756
TNRC6A trinucleotide repeat containing 6A 0.0374981
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0367481
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0367261
CCNI cyclin I 0.0365946
ENO1 enolase 1, (alpha) 0.0363774
MAML2 mastermind-like 2 (Drosophila) 0.0360189
AFF4 AF4/FMR2 family, member 4 0.0360077
FMNL2 formin-like 2 0.03569
TAS2R14 taste receptor, type 2, member 14 0.0352859
AKAP13 A kinase (PRKA) anchor protein 13 0.0352469
OSMR oncostatin M receptor 0.0352338
PAN3 PAN3 poly(A) specific ribonuclease subunit 0.0348293
MAML3 mastermind-like 3 (Drosophila) 0.0344953
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 0.0341147
HILPDA hypoxia inducible lipid droplet-associated 0.0336957
EIF3H eukaryotic translation initiation factor 3, subunit H 0.0329549
TPR translocated promoter region, nuclear basket protein 0.032525
RUNX1 runt-related transcription factor 1 0.032293
PCBP2 poly(rC) binding protein 2 0.0321799
PTBP3 polypyrimidine tract binding protein 3 0.032144
FAM13B family with sequence similarity 13, member B 0.032039
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0319934
ERRFI1 ERBB receptor feedback inhibitor 1 0.0317922
SPAG9 sperm associated antigen 9 0.0317272
BIRC6 baculoviral IAP repeat containing 6 0.0315805
MYO1E myosin IE 0.0314691
KMT2C lysine (K)-specific methyltransferase 2C 0.0313698
STK17A serine/threonine kinase 17a 0.0312634
PARD3 par-3 family cell polarity regulator 0.0307934
ANKRD17 ankyrin repeat domain 17 0.0303041
ZBTB38 zinc finger and BTB domain containing 38 0.0302267
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0301416
BZW1 basic leucine zipper and W2 domains 1 0.0300931
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0297196
PLAUR plasminogen activator, urokinase receptor 0.0295756
LPP LIM domain containing preferred translocation partner in lipoma 0.0293813
FBXO11 F-box protein 11 0.0293784
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0292141
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0292105
DTNA dystrobrevin, alpha 0.0289555
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0287936
WDR26 WD repeat domain 26 0.0281337
TRIO trio Rho guanine nucleotide exchange factor 0.0278531
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.02777
MYO9A myosin IXA 0.02755
RIMKLB ribosomal modification protein rimK-like family member B 0.0269627
CEP350 centrosomal protein 350kDa 0.026925
EPS8 epidermal growth factor receptor pathway substrate 8 0.026689
KDM5A lysine (K)-specific demethylase 5A 0.0266871
SNX9 sorting nexin 9 0.0264084
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0263182
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0262191
IGF1R insulin-like growth factor 1 receptor 0.0255253
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0254447
MBNL1 muscleblind-like splicing regulator 1 0.0253486
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0253369
TNIP1 TNFAIP3 interacting protein 1 0.0252977
WDR45B WD repeat domain 45B 0.0252154
CD58 CD58 molecule 0.0251985
RBM25 RNA binding motif protein 25 0.0251835
SSBP2 single-stranded DNA binding protein 2 0.0247704
ZNF292 zinc finger protein 292 0.0246412

decreased expression

Symbol Name Standardized Value
MUC16 mucin 16, cell surface associated -0.100609
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.073956
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0679339
CEMIP cell migration inducing protein, hyaluronan binding -0.0606714
IGFBP3 insulin-like growth factor binding protein 3 -0.0518833
PTMA prothymosin, alpha -0.0515276
SLC38A1 solute carrier family 38, member 1 -0.0502563
RPS6 ribosomal protein S6 -0.0483819
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0480118
BACE2 beta-site APP-cleaving enzyme 2 -0.0469292
ATOSA atos homolog A -0.0458305
RPS25 ribosomal protein S25 -0.0449456
RPLP0 ribosomal protein, large, P0 -0.0440758
STAT6 signal transducer and activator of transcription 6, interleukin-4 induced -0.0436696
RPS24 ribosomal protein S24 -0.0427615
RAB7A RAB7A, member RAS oncogene family -0.0426123
DLG1 discs, large homolog 1 (Drosophila) -0.0420258
CAPN2 calpain 2, (m/II) large subunit -0.0405501
S100A9 S100 calcium binding protein A9 -0.0394641
RPS17 ribosomal protein S17 -0.039021
ACTG1 actin gamma 1 -0.0379741
MBD5 methyl-CpG binding domain protein 5 -0.0378474
AKAP12 A kinase (PRKA) anchor protein 12 -0.0374614
RPS29 ribosomal protein S29 -0.0366148
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0353227
FNDC3B fibronectin type III domain containing 3B -0.0351542
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0345687
POTEF POTE ankyrin domain family, member F -0.0342783
RPL15 ribosomal protein L15 -0.0341283
RPS3 ribosomal protein S3 -0.0341161
IGF2 insulin-like growth factor 2 -0.0340609
WASL Wiskott-Aldrich syndrome-like -0.0338667
RREB1 ras responsive element binding protein 1 -0.0333956
RPL35A ribosomal protein L35a -0.0330375
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0326588
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0326149
RPS27A ribosomal protein S27a -0.0325663
CNKSR3 CNKSR family member 3 -0.0322502
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0309986
F3 coagulation factor III (thromboplastin, tissue factor) -0.0307551
RPL37 ribosomal protein L37 -0.0307354
VRK2 vaccinia related kinase 2 -0.0307077
EEF1G eukaryotic translation elongation factor 1 gamma -0.0306542
ERBIN erbb2 interacting protein -0.0305468
ADNP activity-dependent neuroprotector homeobox -0.0303302
MPRIP myosin phosphatase Rho interacting protein -0.0298737
PELI1 pellino E3 ubiquitin protein ligase 1 -0.0298271
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0296259
WNK1 WNK lysine deficient protein kinase 1 -0.0295444
TBC1D15 TBC1 domain family, member 15 -0.0295237
FTL ferritin, light polypeptide -0.0286581
PARD6B par-6 family cell polarity regulator beta -0.0285065
SEC24D SEC24 family member D -0.0283398
STEAP4 STEAP family member 4 -0.0282853
CD46 CD46 molecule, complement regulatory protein -0.0281643
SF3B1 splicing factor 3b, subunit 1, 155kDa -0.0277561
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.027593
SECISBP2L SECIS binding protein 2-like -0.0273255
GPATCH8 G patch domain containing 8 -0.0272994
GPATCH2L G patch domain containing 2-like -0.0272938
AHNAK AHNAK nucleoprotein -0.0270304
ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A -0.0267302
RBM47 RNA binding motif protein 47 -0.0266069
EGR1 early growth response 1 -0.0264035
RPL34 ribosomal protein L34 -0.0263139
MYOF myoferlin -0.0261622
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 -0.0260776
RPS21 ribosomal protein S21 -0.02588
RPS14 ribosomal protein S14 -0.0257382
SND1 staphylococcal nuclease and tudor domain containing 1 -0.0251408
KDELR2 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 -0.0247811
UBC ubiquitin C -0.0247796
THOC2 THO complex 2 -0.0245186
RAP1B RAP1B, member of RAS oncogene family -0.0244898
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.0244864
RPTOR regulatory associated protein of MTOR, complex 1 -0.0244135
TJP2 tight junction protein 2 -0.0243254
DIAPH1 diaphanous-related formin 1 -0.0241888
MYO9B myosin IXB -0.0241289
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0240643
SVIL supervillin -0.0240139
CATSPERB catsper channel auxiliary subunit beta -0.0240083
KDM5B lysine (K)-specific demethylase 5B -0.0239711
RPL28 ribosomal protein L28 -0.0237397
ZNF638 zinc finger protein 638 -0.0237175
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0235622
SEPTIN2 septin 2 -0.0235179
TUFT1 tuftelin 1 -0.0234033
RPS19 ribosomal protein S19 -0.0232198
AVL9 AVL9 homolog (S. cerevisiase) -0.0229861
MYH14 myosin, heavy chain 14, non-muscle -0.0228497
TPM4 tropomyosin 4 -0.022627
JMJD1C jumonji domain containing 1C -0.0225366
USP6NL USP6 N-terminal like -0.0224918
RHOA ras homolog family member A -0.0222493
KRT19 keratin 19, type I -0.0221214
VMP1 vacuole membrane protein 1 -0.0219844
SDCBP2 syndecan binding protein (syntenin) 2 -0.0218705
KAT6A K(lysine) acetyltransferase 6A -0.0216955
RESF1 retroelement silencing factor 1 -0.0215375