Saquinavir_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Saquinavir perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Saquinavir_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PSD3 pleckstrin and Sec7 domain containing 3 0.147678
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0858236
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0823886
PRKN parkin RBR E3 ubiquitin protein ligase 0.0750394
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0723662
VIM vimentin 0.0721585
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0678668
KYNU kynureninase 0.0665939
RPLP0 ribosomal protein, large, P0 0.0649122
MT2A metallothionein 2A 0.0616866
MAML3 mastermind-like 3 (Drosophila) 0.0610419
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0598439
TPT1 tumor protein, translationally-controlled 1 0.0582654
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.058046
DOCK4 dedicator of cytokinesis 4 0.0575475
EFNA5 ephrin-A5 0.0562515
GRAMD1B GRAM domain containing 1B 0.0528212
PDE10A phosphodiesterase 10A 0.0527493
NEK7 NIMA-related kinase 7 0.0514877
RPS12 ribosomal protein S12 0.0505264
MCL1 myeloid cell leukemia 1 0.0482869
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0477001
RPS8 ribosomal protein S8 0.0476536
MFF mitochondrial fission factor 0.0447802
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.0424498
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0424218
PYGL phosphorylase, glycogen, liver 0.0419111
ASPH aspartate beta-hydroxylase 0.0410878
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0402907
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0399765
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0391559
RPS24 ribosomal protein S24 0.0384596
TGFBR1 transforming growth factor, beta receptor 1 0.0383748
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0383413
JMJD1C jumonji domain containing 1C 0.037835
BCAS3 breast carcinoma amplified sequence 3 0.0377285
DOCK5 dedicator of cytokinesis 5 0.0371897
MBD5 methyl-CpG binding domain protein 5 0.0371184
RPS3 ribosomal protein S3 0.0366777
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.0351933
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0348114
PM20D1 peptidase M20 domain containing 1 0.0346168
CD109 CD109 molecule 0.0343426
RAB3B RAB3B, member RAS oncogene family 0.0342113
ANTXR1 anthrax toxin receptor 1 0.0335818
CARD16 caspase recruitment domain family, member 16 0.0335134
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.033482
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 0.0334766
LDHA lactate dehydrogenase A 0.0329226
EXOC6B exocyst complex component 6B 0.0329138
ARB2A ARB2 cotranscriptional regulator A 0.0322312
ARL15 ADP-ribosylation factor-like 15 0.0317384
CXCL8 chemokine (C-X-C motif) ligand 8 0.0316234
DST dystonin 0.031595
EXT1 exostosin glycosyltransferase 1 0.031082
RACK1 receptor for activated C kinase 1 0.030374
PLCB4 phospholipase C, beta 4 0.0301777
OSMR oncostatin M receptor 0.0297363
STC1 stanniocalcin 1 0.029628
COL4A5 collagen, type IV, alpha 5 0.0294327
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0280043
RPL39 ribosomal protein L39 0.0279592
ATXN1 ataxin 1 0.0279225
MBNL1 muscleblind-like splicing regulator 1 0.0277082
TRIP12 thyroid hormone receptor interactor 12 0.0276824
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0274826
S100A6 S100 calcium binding protein A6 0.0271197
RAD51B RAD51 paralog B 0.026977
CCDC6 coiled-coil domain containing 6 0.0266298
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 0.0265202
UBC ubiquitin C 0.0262839
KIAA0825 KIAA0825 0.0260406
EXOC4 exocyst complex component 4 0.0258393
SMOC1 SPARC related modular calcium binding 1 0.0258038
SMAD2 SMAD family member 2 0.0254274
ZSWIM6 zinc finger, SWIM-type containing 6 0.0251943
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0250756
FBXL17 F-box and leucine-rich repeat protein 17 0.0246808
EIF1 eukaryotic translation initiation factor 1 0.0244588
SLC38A2 solute carrier family 38, member 2 0.0244539
ANXA1 annexin A1 0.0243524
SFPQ splicing factor proline/glutamine-rich 0.0242983
USP34 ubiquitin specific peptidase 34 0.0240486
HDAC4 histone deacetylase 4 0.0240281
TBC1D5 TBC1 domain family, member 5 0.0238804
NT5C2 5'-nucleotidase, cytosolic II 0.0238183
RPS16 ribosomal protein S16 0.0238094
NALF1 NALCN channel auxiliary factor 1 0.0237875
SOX9 SRY (sex determining region Y)-box 9 0.0236432
ENAH enabled homolog (Drosophila) 0.0233615
LPP LIM domain containing preferred translocation partner in lipoma 0.0232633
FNDC3A fibronectin type III domain containing 3A 0.023223
PERP PERP, TP53 apoptosis effector 0.0231233
ZEB1 zinc finger E-box binding homeobox 1 0.0228028
PTPRM protein tyrosine phosphatase, receptor type, M 0.0226462
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0225797
SDCCAG8 serologically defined colon cancer antigen 8 0.0225499
LSAMP limbic system-associated membrane protein 0.0223265
ELL2 elongation factor, RNA polymerase II, 2 0.0222804
PTBP3 polypyrimidine tract binding protein 3 0.0222731

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.349512
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.160485
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.139959
PTMA prothymosin, alpha -0.0805819
IGFBP3 insulin-like growth factor binding protein 3 -0.070201
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0700905
COL5A2 collagen, type V, alpha 2 -0.0632617
TMSB10 thymosin beta 10 -0.0581922
RPS6 ribosomal protein S6 -0.0577879
LIMCH1 LIM and calponin homology domains 1 -0.0562657
PDIA3 protein disulfide isomerase family A, member 3 -0.0552716
CANX calnexin -0.0552692
MYOF myoferlin -0.0483799
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0424578
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0391891
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0389709
GOLGA4 golgin A4 -0.037343
MATR3 matrin 3 -0.0330541
TENT5A terminal nucleotidyltransferase 5A -0.0329945
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0322271
SLC39A8 solute carrier family 39 (zinc transporter), member 8 -0.0311685
RPL34 ribosomal protein L34 -0.0290539
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.028582
RPL36 ribosomal protein L36 -0.0284851
NCOR2 nuclear receptor corepressor 2 -0.0283578
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0279172
CAMTA1 calmodulin binding transcription activator 1 -0.0276663
FTH1 ferritin, heavy polypeptide 1 -0.0269017
HLA-B major histocompatibility complex, class I, B -0.0264271
GARS1 glycyl-tRNA synthetase 1 -0.02617
RPLP2 ribosomal protein, large, P2 -0.0259
NBEAL1 neurobeachin-like 1 -0.0258243
TENM3 teneurin transmembrane protein 3 -0.0257227
NAMPT nicotinamide phosphoribosyltransferase -0.02511
RPS19 ribosomal protein S19 -0.0245193
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.023866
DGKD diacylglycerol kinase, delta 130kDa -0.0236136
RPL38 ribosomal protein L38 -0.0234328
STC2 stanniocalcin 2 -0.0233476
CTBP2 C-terminal binding protein 2 -0.0224369
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 -0.0222414
RPL23 ribosomal protein L23 -0.0221561
PDIA6 protein disulfide isomerase family A, member 6 -0.0219045
SBF2 SET binding factor 2 -0.0207101
RPLP1 ribosomal protein, large, P1 -0.0206422
PDIA4 protein disulfide isomerase family A, member 4 -0.0199072
RPL14 ribosomal protein L14 -0.0196091
RPL35 ribosomal protein L35 -0.0195032
NIPA1 non imprinted in Prader-Willi/Angelman syndrome 1 -0.0192791
HYOU1 hypoxia up-regulated 1 -0.0192276
GNAS GNAS complex locus -0.0188704
SOX4 SRY (sex determining region Y)-box 4 -0.0188699
P3H2 prolyl 3-hydroxylase 2 -0.0188042
ENO2 enolase 2 (gamma, neuronal) -0.0188003
PCBP3 poly(rC) binding protein 3 -0.0187391
NEDD1 neural precursor cell expressed, developmentally down-regulated 1 -0.01859
ANKRD11 ankyrin repeat domain 11 -0.0184541
EIF5B eukaryotic translation initiation factor 5B -0.0184507
RSL1D1 ribosomal L1 domain containing 1 -0.0184113
LMAN1 lectin, mannose-binding, 1 -0.0183952
LAMB1 laminin, beta 1 -0.0178191
UBAP2L ubiquitin associated protein 2-like -0.0174468
SEPTIN10 septin 10 -0.0173881
EEF1G eukaryotic translation elongation factor 1 gamma -0.0173853
ZC3H12C zinc finger CCCH-type containing 12C -0.0171103
COPA coatomer protein complex, subunit alpha -0.0170697
WARS1 tryptophanyl-tRNA synthetase 1 -0.0170589
AKR1C1 aldo-keto reductase family 1, member C1 -0.0170307
SMAP1 small ArfGAP 1 -0.0169597
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0169349
TPR translocated promoter region, nuclear basket protein -0.0169046
VEGFA vascular endothelial growth factor A -0.0167416
LAMA5 laminin, alpha 5 -0.016594
TBXT T-box transcription factor T -0.0163731
NRCAM neuronal cell adhesion molecule -0.0162355
IARS1 isoleucyl-tRNA synthetase 1 -0.0160851
TKT transketolase -0.0160584
ZC3H11A zinc finger CCCH-type containing 11A -0.0160069
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 -0.015999
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0159916
HLA-A major histocompatibility complex, class I, A -0.0159738
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0159301
PDE1C phosphodiesterase 1C, calmodulin-dependent 70kDa -0.0158747
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0156096
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0153944
CTSL cathepsin L -0.0153353
BLTP2 bridge-like lipid transfer protein family member 2 -0.0152323
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D -0.0150595
OGA O-GlcNAcase -0.0149416
YEATS2 YEATS domain containing 2 -0.0148178
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0146382
SREBF2 sterol regulatory element binding transcription factor 2 -0.0146053
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0145893
USP37 ubiquitin specific peptidase 37 -0.0145098
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked -0.0144515
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0144347
DNER delta/notch-like EGF repeat containing -0.0143597
MPZL1 myelin protein zero-like 1 -0.0142354
MYH9 myosin, heavy chain 9, non-muscle -0.0141981
CHD3 chromodomain helicase DNA binding protein 3 -0.0141838