Saquinavir_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Saquinavir perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Saquinavir_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HDAC9 histone deacetylase 9 0.0759697
TNRC6B trinucleotide repeat containing 6B 0.0733704
ANKRD33B ankyrin repeat domain 33B 0.0707737
JMJD1C jumonji domain containing 1C 0.0695754
SPAG9 sperm associated antigen 9 0.0692375
DST dystonin 0.0657452
RASAL2 RAS protein activator like 2 0.0603999
KMT2E lysine (K)-specific methyltransferase 2E 0.0603505
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0557512
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0530034
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0527589
FNDC3A fibronectin type III domain containing 3A 0.0524877
RPS6 ribosomal protein S6 0.0519936
PRTG protogenin 0.0512823
LHFPL6 LHFPL tetraspan subfamily member 6 0.0478158
RPS12 ribosomal protein S12 0.0475063
IRF2BP2 interferon regulatory factor 2 binding protein 2 0.046971
AKAP9 A kinase (PRKA) anchor protein 9 0.0468426
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0460991
SOX5 SRY (sex determining region Y)-box 5 0.04482
SAMD4A sterile alpha motif domain containing 4A 0.044363
MACF1 microtubule-actin crosslinking factor 1 0.0442548
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0433842
ATXN2 ataxin 2 0.0432425
FBXO11 F-box protein 11 0.0432041
TAS2R14 taste receptor, type 2, member 14 0.0430504
RPS8 ribosomal protein S8 0.0427064
USP25 ubiquitin specific peptidase 25 0.0424598
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.040722
GOLGB1 golgin B1 0.0399598
TTC3 tetratricopeptide repeat domain 3 0.03856
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0375741
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0368857
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 0.0365367
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0362822
GPBP1 GC-rich promoter binding protein 1 0.0361135
DDIT4 DNA-damage-inducible transcript 4 0.0350534
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0350279
MB21D2 Mab-21 domain containing 2 0.0344323
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0341294
AKAP12 A kinase (PRKA) anchor protein 12 0.0341032
EFNA5 ephrin-A5 0.0339511
WWC2 WW and C2 domain containing 2 0.0339403
MBD5 methyl-CpG binding domain protein 5 0.0339221
SRPK2 SRSF protein kinase 2 0.0332851
SOS1 son of sevenless homolog 1 (Drosophila) 0.0326231
B2M beta-2-microglobulin 0.0320806
RPS3 ribosomal protein S3 0.0320671
IFIH1 interferon induced with helicase C domain 1 0.0320201
CSNK1A1 casein kinase 1, alpha 1 0.0319408
PHIP pleckstrin homology domain interacting protein 0.0319075
KTN1 kinectin 1 (kinesin receptor) 0.0317533
CEP350 centrosomal protein 350kDa 0.0314983
NBEAL1 neurobeachin-like 1 0.0314032
ZBTB20 zinc finger and BTB domain containing 20 0.0313577
NR6A1 nuclear receptor subfamily 6, group A, member 1 0.0313079
VCL vinculin 0.0311202
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0310233
SORBS2 sorbin and SH3 domain containing 2 0.0309594
RPS16 ribosomal protein S16 0.0308942
CCDC88A coiled-coil domain containing 88A 0.0307677
RPL35A ribosomal protein L35a 0.0306303
KMT2C lysine (K)-specific methyltransferase 2C 0.0305011
RBM20 RNA binding motif protein 20 0.030379
COG5 component of oligomeric golgi complex 5 0.0301954
FGF13 fibroblast growth factor 13 0.0298843
CLIP2 CAP-GLY domain containing linker protein 2 0.0298705
YARS1 tyrosyl-tRNA synthetase 1 0.0298446
ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A 0.029231
LYST lysosomal trafficking regulator 0.0291817
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0291813
ISG15 ISG15 ubiquitin-like modifier 0.0291576
PGAP1 post-GPI attachment to proteins 1 0.0291506
RIGI RNA sensor RIG-I 0.0290984
CTBP2 C-terminal binding protein 2 0.0290316
ZEB2 zinc finger E-box binding homeobox 2 0.0289966
NRIP1 nuclear receptor interacting protein 1 0.028936
ITSN2 intersectin 2 0.0289177
MAML2 mastermind-like 2 (Drosophila) 0.028886
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0288712
GARRE1 granule associated Rac and RHOG effector 1 0.028508
INTS6 integrator complex subunit 6 0.0279056
TPT1 tumor protein, translationally-controlled 1 0.0278352
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0278059
ERBIN erbb2 interacting protein 0.0276476
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0275132
HIP1 huntingtin interacting protein 1 0.0274765
RPLP0 ribosomal protein, large, P0 0.0274615
MAP4K3 mitogen-activated protein kinase kinase kinase kinase 3 0.0268229
FMNL2 formin-like 2 0.0267722
SMYD3 SET and MYND domain containing 3 0.0266671
BRAF B-Raf proto-oncogene, serine/threonine kinase 0.0266255
PTEN phosphatase and tensin homolog 0.0263379
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0260749
GPHN gephyrin 0.0258862
ZSWIM6 zinc finger, SWIM-type containing 6 0.0255985
RSRC2 arginine/serine-rich coiled-coil 2 0.0255621
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.025473
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0254523
RPL23 ribosomal protein L23 0.0254111

decreased expression

Symbol Name Standardized Value
CADM2 cell adhesion molecule 2 -0.13744
COL11A1 collagen, type XI, alpha 1 -0.125563
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.122367
PCLO piccolo presynaptic cytomatrix protein -0.117027
GPC3 glypican 3 -0.109994
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.102539
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0914356
ITGAV integrin, alpha V -0.0886832
NRG1 neuregulin 1 -0.0884822
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.0872629
PCDH9 protocadherin 9 -0.086993
THBS1 thrombospondin 1 -0.0834686
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0812484
ADGRL3 adhesion G protein-coupled receptor L3 -0.0800108
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0759731
PTMA prothymosin, alpha -0.0728664
EMP1 epithelial membrane protein 1 -0.0647031
METAP2 methionyl aminopeptidase 2 -0.0638444
TMSB10 thymosin beta 10 -0.0610756
COL5A2 collagen, type V, alpha 2 -0.0599911
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0599816
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.059052
AHNAK AHNAK nucleoprotein -0.0580378
MKI67 marker of proliferation Ki-67 -0.0568768
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0563681
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0554212
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0538005
ADGRV1 adhesion G protein-coupled receptor V1 -0.0536273
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.053323
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0528964
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0519739
POTEF POTE ankyrin domain family, member F -0.0487925
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0479387
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0453329
LRRC4C leucine rich repeat containing 4C -0.0450809
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0443687
MAP4 microtubule-associated protein 4 -0.042528
ARHGAP15 Rho GTPase activating protein 15 -0.042068
SFRP4 secreted frizzled-related protein 4 -0.0405217
ATP5F1B ATP synthase F1 subunit beta -0.0401579
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0400196
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0399172
SLIT2 slit homolog 2 (Drosophila) -0.0390327
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0385126
CALR calreticulin -0.0381661
MDK midkine (neurite growth-promoting factor 2) -0.0381522
COLGALT2 collagen beta(1-O)galactosyltransferase 2 -0.0376081
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0375741
ACTN4 actinin, alpha 4 -0.0373209
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.036593
SLC30A8 solute carrier family 30 (zinc transporter), member 8 -0.0360617
SEMA3E sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E -0.0359983
TMSB4X thymosin beta 4, X-linked -0.0358943
CSMD3 CUB and Sushi multiple domains 3 -0.0353945
ACTG1 actin gamma 1 -0.0353112
COL1A2 collagen, type I, alpha 2 -0.0334353
SET SET nuclear proto-oncogene -0.0332294
HMCN1 hemicentin 1 -0.0329654
TPX2 TPX2, microtubule-associated -0.0327492
UBC ubiquitin C -0.0327339
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0323584
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.0320395
CCT5 chaperonin containing TCP1, subunit 5 (epsilon) -0.0311435
CCDC102B coiled-coil domain containing 102B -0.0308897
TUBB tubulin, beta class I -0.0301229
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0299276
NONO non-POU domain containing, octamer-binding -0.0299217
ILF3 interleukin enhancer binding factor 3, 90kDa -0.0297868
EEF2 eukaryotic translation elongation factor 2 -0.0293704
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 -0.0291794
MARCHF6 membrane associated ring-CH-type finger 6 -0.0291517
SLC44A5 solute carrier family 44, member 5 -0.0285434
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0284967
USP9X ubiquitin specific peptidase 9, X-linked -0.0284635
CKAP5 cytoskeleton associated protein 5 -0.0284278
THOC2 THO complex 2 -0.02839
IGF2R insulin-like growth factor 2 receptor -0.0283239
HMGB2 high mobility group box 2 -0.0283125
ZC3H15 zinc finger CCCH-type containing 15 -0.0280152
PFN1 profilin 1 -0.0278751
KHSRP KH-type splicing regulatory protein -0.0277686
TEX11 testis expressed 11 -0.0277029
CBX5 chromobox homolog 5 -0.0276658
PLEKHG4B pleckstrin homology domain containing, family G (with RhoGef domain) member 4B -0.02748
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa -0.0274762
MTCL1 microtubule crosslinking factor 1 -0.0273379
EPHA3 EPH receptor A3 -0.0270432
PDIA4 protein disulfide isomerase family A, member 4 -0.026979
PABPN1 poly(A) binding protein, nuclear 1 -0.0268336
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0265555
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0263738
CAVIN1 caveolae associated protein 1 -0.0262412
VIM vimentin -0.0259784
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) -0.0259711
ADGRG6 adhesion G protein-coupled receptor G6 -0.0258457
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 -0.0258096
ENO1 enolase 1, (alpha) -0.0256062
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein -0.0255643
CANX calnexin -0.0253496
STRN3 striatin, calmodulin binding protein 3 -0.0252678