Saquinavir_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Saquinavir perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Saquinavir_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.165419
ZNF292 zinc finger protein 292 0.0784531
ZEB1 zinc finger E-box binding homeobox 1 0.0765682
ECT2 epithelial cell transforming 2 0.0694461
TPT1 tumor protein, translationally-controlled 1 0.0685108
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0652833
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.064394
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0641538
MT2A metallothionein 2A 0.0576062
SMC4 structural maintenance of chromosomes 4 0.0564431
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0553252
CDC73 cell division cycle 73 0.0552947
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0541852
RNF145 ring finger protein 145 0.0531739
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.051219
KDM3A lysine (K)-specific demethylase 3A 0.0498488
NAV2 neuron navigator 2 0.049795
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0485194
QKI QKI, KH domain containing, RNA binding 0.0481567
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0473728
ANLN anillin, actin binding protein 0.0471748
MARCHF6 membrane associated ring-CH-type finger 6 0.0465352
RFC3 replication factor C (activator 1) 3, 38kDa 0.0455017
NIPBL Nipped-B homolog (Drosophila) 0.0447309
ZFAND3 zinc finger, AN1-type domain 3 0.0439305
DUSP6 dual specificity phosphatase 6 0.0438224
IRF2BP2 interferon regulatory factor 2 binding protein 2 0.0429667
RLF rearranged L-myc fusion 0.0425212
LCORL ligand dependent nuclear receptor corepressor-like 0.0422891
RBM25 RNA binding motif protein 25 0.0419001
NAP1L1 nucleosome assembly protein 1-like 1 0.0417336
DIAPH3 diaphanous-related formin 3 0.0414982
SPRY2 sprouty homolog 2 (Drosophila) 0.0408169
ADAM10 ADAM metallopeptidase domain 10 0.0403052
EML4 echinoderm microtubule associated protein like 4 0.0400863
RRM2 ribonucleotide reductase M2 0.0383246
PDE4D phosphodiesterase 4D, cAMP-specific 0.0380002
ELF2 E74-like factor 2 (ets domain transcription factor) 0.037466
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0369075
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0368543
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0367811
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 0.0363601
JMJD1C jumonji domain containing 1C 0.0363471
SCLT1 sodium channel and clathrin linker 1 0.0354514
SSBP2 single-stranded DNA binding protein 2 0.0354311
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 0.0350923
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0342541
EZR ezrin 0.0341878
PUM1 pumilio RNA-binding family member 1 0.03303
STK4 serine/threonine kinase 4 0.0325623
TRPM7 transient receptor potential cation channel, subfamily M, member 7 0.0323704
MORF4L2 mortality factor 4 like 2 0.0320899
ERBIN erbb2 interacting protein 0.0320511
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0316252
S100A6 S100 calcium binding protein A6 0.0315823
H3-3B H3.3 histone B 0.0315748
RAD21 RAD21 homolog (S. pombe) 0.031432
RTN4 reticulon 4 0.0313191
RPS3 ribosomal protein S3 0.0311143
CKAP2 cytoskeleton associated protein 2 0.030714
PDIA6 protein disulfide isomerase family A, member 6 0.0303708
TM4SF1 transmembrane 4 L six family member 1 0.0303443
NCOR1 nuclear receptor corepressor 1 0.0303382
TMSB4X thymosin beta 4, X-linked 0.0300509
AHCYL2 adenosylhomocysteinase-like 2 0.029673
SPRY1 sprouty homolog 1, antagonist of FGF signaling (Drosophila) 0.0296538
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 0.02946
CCNI cyclin I 0.0293121
CRY1 cryptochrome circadian clock 1 0.0286905
GAS2L3 growth arrest-specific 2 like 3 0.0285556
ANXA1 annexin A1 0.0285333
PARD3 par-3 family cell polarity regulator 0.0285331
G2E3 G2/M-phase specific E3 ubiquitin protein ligase 0.0283655
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0282664
TPX2 TPX2, microtubule-associated 0.028153
ZFP36L1 ZFP36 ring finger protein-like 1 0.0281244
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0281038
MAP2K1 mitogen-activated protein kinase kinase 1 0.0276666
RSRC2 arginine/serine-rich coiled-coil 2 0.0274289
NUP58 nucleoporin 58 0.0273069
AKAP12 A kinase (PRKA) anchor protein 12 0.027098
CNOT6L CCR4-NOT transcription complex, subunit 6-like 0.0270224
WAC WW domain containing adaptor with coiled-coil 0.0267972
CENPF centromere protein F, 350/400kDa 0.0267333
KIF18B kinesin family member 18B 0.0265255
ADD1 adducin 1 (alpha) 0.0263163
USP3 ubiquitin specific peptidase 3 0.0262636
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0260312
CTBP2 C-terminal binding protein 2 0.0259524
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0259445
PHIP pleckstrin homology domain interacting protein 0.0257523
MYL12B myosin, light chain 12B, regulatory 0.0257233
PNISR PNN-interacting serine/arginine-rich protein 0.0255852
TTK TTK protein kinase 0.025391
ATOSA atos homolog A 0.0253637
RPS24 ribosomal protein S24 0.0252335
ZCCHC8 zinc finger, CCHC domain containing 8 0.0251956
NUDT3 nudix (nucleoside diphosphate linked moiety X)-type motif 3 0.0251035
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0249684
RHEB Ras homolog enriched in brain 0.02493

decreased expression

Symbol Name Standardized Value
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.104177
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0905949
RPL35A ribosomal protein L35a -0.0797819
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0791346
PKM pyruvate kinase, muscle -0.0775652
RPS6 ribosomal protein S6 -0.0770856
FHIT fragile histidine triad -0.0725099
EGFR epidermal growth factor receptor -0.0719477
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0713619
RPL31 ribosomal protein L31 -0.0701369
TJP1 tight junction protein 1 -0.0681795
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0613883
AHNAK AHNAK nucleoprotein -0.0592503
KLF3 Kruppel-like factor 3 (basic) -0.0591657
EEF1G eukaryotic translation elongation factor 1 gamma -0.0580761
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0572043
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0567228
SRRM2 serine/arginine repetitive matrix 2 -0.0546901
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0539998
EEF2 eukaryotic translation elongation factor 2 -0.0532982
POTEF POTE ankyrin domain family, member F -0.0520085
PDIA3 protein disulfide isomerase family A, member 3 -0.051636
GLI2 GLI family zinc finger 2 -0.0513724
EFNA5 ephrin-A5 -0.0505812
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0492281
ZMYND8 zinc finger, MYND-type containing 8 -0.0491187
PYGB phosphorylase, glycogen; brain -0.0478697
RPL3 ribosomal protein L3 -0.0473273
GOLGA4 golgin A4 -0.0471752
RPL37A ribosomal protein L37a -0.0438998
NBEA neurobeachin -0.0432689
TXNRD1 thioredoxin reductase 1 -0.0428031
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.0413569
SMC3 structural maintenance of chromosomes 3 -0.0403438
ENO1 enolase 1, (alpha) -0.0398482
TBC1D22A TBC1 domain family, member 22A -0.0394433
NACA nascent polypeptide-associated complex alpha subunit -0.0387217
ONECUT2 one cut homeobox 2 -0.03825
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0374878
FLNB filamin B, beta -0.0368262
SQSTM1 sequestosome 1 -0.0366959
YEATS2 YEATS domain containing 2 -0.0359286
NPAS2 neuronal PAS domain protein 2 -0.0359013
BABAM2 BRISC and BRCA1 A complex member 2 -0.0353788
MAP3K14 mitogen-activated protein kinase kinase kinase 14 -0.0353605
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0351181
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase -0.0351032
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0345861
TTC28 tetratricopeptide repeat domain 28 -0.0345653
PICALM phosphatidylinositol binding clathrin assembly protein -0.0343618
ENOX1 ecto-NOX disulfide-thiol exchanger 1 -0.0343211
RPL36 ribosomal protein L36 -0.0342638
RPLP2 ribosomal protein, large, P2 -0.0339855
RPS27 ribosomal protein S27 -0.0336797
SLC38A2 solute carrier family 38, member 2 -0.0336021
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0335357
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0322332
UNC13A unc-13 homolog A (C. elegans) -0.0320241
EBNA1BP2 EBNA1 binding protein 2 -0.0311505
CAMKMT calmodulin-lysine N-methyltransferase -0.0308818
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0302578
WARS1 tryptophanyl-tRNA synthetase 1 -0.029914
HM13 histocompatibility (minor) 13 -0.0297956
RPL9 ribosomal protein L9 -0.0296271
CLIC4 chloride intracellular channel 4 -0.0295908
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0295653
PPP1R9A protein phosphatase 1, regulatory subunit 9A -0.0295529
CD47 CD47 molecule -0.0290227
GPHN gephyrin -0.0288572
BMP2K BMP2 inducible kinase -0.0288155
CLIP1 CAP-GLY domain containing linker protein 1 -0.0286449
EMP3 epithelial membrane protein 3 -0.0285387
ARL4C ADP-ribosylation factor-like 4C -0.0282857
EIF4B eukaryotic translation initiation factor 4B -0.0280673
PLCE1 phospholipase C, epsilon 1 -0.0273963
ZBTB20 zinc finger and BTB domain containing 20 -0.0270974
RPS23 ribosomal protein S23 -0.0270324
TMEM165 transmembrane protein 165 -0.0270238
CLIP2 CAP-GLY domain containing linker protein 2 -0.0269872
PDE10A phosphodiesterase 10A -0.0267989
PTPRG protein tyrosine phosphatase, receptor type, G -0.0267179
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0265461
HSPA8 heat shock 70kDa protein 8 -0.0264787
TM9SF4 transmembrane 9 superfamily protein member 4 -0.0261996
USP25 ubiquitin specific peptidase 25 -0.0260485
TULP4 tubby like protein 4 -0.0252728
RPL21 ribosomal protein L21 -0.0251233
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.0250166
CUL5 cullin 5 -0.0246997
AGO2 argonaute RISC catalytic component 2 -0.0244374
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0244364
DARS1 aspartyl-tRNA synthetase 1 -0.024326
TMSB10 thymosin beta 10 -0.0241305
RFX7 regulatory factor X, 7 -0.0240838
ITGAV integrin, alpha V -0.0237137
ATN1 atrophin 1 -0.0234836
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 -0.0234534
RPS19 ribosomal protein S19 -0.0233289
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0230969
QSER1 glutamine and serine rich 1 -0.0229873