Selinexor _SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Selinexor perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Selinexor _SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.1923
GLIS3 GLIS family zinc finger 3 0.117953
VCAN versican 0.100106
COL6A3 collagen, type VI, alpha 3 0.0943013
PCLO piccolo presynaptic cytomatrix protein 0.0910869
HMGA2 high mobility group AT-hook 2 0.0781252
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0607964
CDH13 cadherin 13 0.0583436
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0559389
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0525551
HDAC9 histone deacetylase 9 0.0519221
MYH9 myosin, heavy chain 9, non-muscle 0.0495269
IGFBP3 insulin-like growth factor binding protein 3 0.0461986
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.0453587
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.044329
MACF1 microtubule-actin crosslinking factor 1 0.0415034
TRIO trio Rho guanine nucleotide exchange factor 0.041173
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0402742
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0398631
COL5A1 collagen, type V, alpha 1 0.0388842
THBS2 thrombospondin 2 0.0387351
COL6A1 collagen, type VI, alpha 1 0.0373021
AHNAK AHNAK nucleoprotein 0.036046
CTSB cathepsin B 0.0333597
SFRP1 secreted frizzled-related protein 1 0.0313338
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.030721
SYNJ2 synaptojanin 2 0.029519
STC2 stanniocalcin 2 0.0294716
RND3 Rho family GTPase 3 0.028903
STC1 stanniocalcin 1 0.0279036
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0264259
ASPH aspartate beta-hydroxylase 0.0261413
CEP112 centrosomal protein 112kDa 0.0259512
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0258318
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0254491
NFE2L1 nuclear factor, erythroid 2-like 1 0.0253406
FRMPD4 FERM and PDZ domain containing 4 0.0252958
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0251998
CAVIN1 caveolae associated protein 1 0.0243063
CD44 CD44 molecule (Indian blood group) 0.0241136
EXT1 exostosin glycosyltransferase 1 0.024098
ZBTB38 zinc finger and BTB domain containing 38 0.0238881
SAMD3 sterile alpha motif domain containing 3 0.0234944
EXOC4 exocyst complex component 4 0.023389
HLA-E major histocompatibility complex, class I, E 0.0229504
FRMD4A FERM domain containing 4A 0.0221769
VEGFA vascular endothelial growth factor A 0.0221114
VMP1 vacuole membrane protein 1 0.0220427
AFAP1 actin filament associated protein 1 0.0216193
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0215533
SCGB1D1 secretoglobin, family 1D, member 1 0.0213894
ZC3H12B zinc finger CCCH-type containing 12B 0.0213161
FBXL7 F-box and leucine-rich repeat protein 7 0.0209132
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0208341
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0204891
WDR27 WD repeat domain 27 0.0202718
MLPH melanophilin 0.0201454
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.0199136
GREM1 gremlin 1, DAN family BMP antagonist 0.019447
SMAD3 SMAD family member 3 0.019308
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0192811
PAPPA pregnancy-associated plasma protein A, pappalysin 1 0.0190433
NRP1 neuropilin 1 0.018613
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0185879
THSD4 thrombospondin, type I, domain containing 4 0.018497
ARHGAP22 Rho GTPase activating protein 22 0.0184717
ARHGAP24 Rho GTPase activating protein 24 0.0184482
MSN moesin 0.0183474
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0182843
DNER delta/notch-like EGF repeat containing 0.0182464
SEPTIN9 septin 9 0.0180483
ADAM12 ADAM metallopeptidase domain 12 0.0176148
AFF3 AF4/FMR2 family, member 3 0.0175751
CANX calnexin 0.017561
HSPH1 heat shock 105kDa/110kDa protein 1 0.0175259
TMSB4X thymosin beta 4, X-linked 0.0169849
MMP12 matrix metallopeptidase 12 0.016817
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0167326
DST dystonin 0.0165621
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0165189
TIAM2 T-cell lymphoma invasion and metastasis 2 0.0164101
EGFR epidermal growth factor receptor 0.0163487
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A 0.0160557
COL4A1 collagen, type IV, alpha 1 0.0159531
RNF150 ring finger protein 150 0.0157393
PSG9 pregnancy specific beta-1-glycoprotein 9 0.015557
RAI14 retinoic acid induced 14 0.0155342
COL6A2 collagen, type VI, alpha 2 0.015346
MAML2 mastermind-like 2 (Drosophila) 0.0152841
NAV1 neuron navigator 1 0.0151583
FRMD6 FERM domain containing 6 0.0150483
PPP1R18 protein phosphatase 1, regulatory subunit 18 0.0150308
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.0145992
CNIH3 cornichon family AMPA receptor auxiliary protein 3 0.0145634
APP amyloid beta (A4) precursor protein 0.0144628
SLC13A3 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 0.0144614
SLFN5 schlafen family member 5 0.01446
STARD13 StAR-related lipid transfer (START) domain containing 13 0.0143351
SYNE1 spectrin repeat containing, nuclear envelope 1 0.0143246
ATM ATM serine/threonine kinase 0.0142512

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.224282
MARCKS myristoylated alanine-rich protein kinase C substrate -0.118752
UGCG UDP-glucose ceramide glucosyltransferase -0.117021
VIM vimentin -0.10934
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.108896
FTL ferritin, light polypeptide -0.0982632
CADM1 cell adhesion molecule 1 -0.09757
SOD2 superoxide dismutase 2, mitochondrial -0.0958663
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0957901
ADM adrenomedullin -0.0953694
ELL2 elongation factor, RNA polymerase II, 2 -0.0934285
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0919997
MT2A metallothionein 2A -0.0918649
IER3 immediate early response 3 -0.0843166
TMSB10 thymosin beta 10 -0.0835962
NAMPT nicotinamide phosphoribosyltransferase -0.082731
ZNF292 zinc finger protein 292 -0.0824727
UBC ubiquitin C -0.0747327
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0703703
RPS6 ribosomal protein S6 -0.0694356
PGK1 phosphoglycerate kinase 1 -0.0684139
NAP1L1 nucleosome assembly protein 1-like 1 -0.0683784
PTMA prothymosin, alpha -0.0679384
TPT1 tumor protein, translationally-controlled 1 -0.0667377
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0644189
NAV2 neuron navigator 2 -0.0640229
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0640206
SPAG9 sperm associated antigen 9 -0.063991
HLA-B major histocompatibility complex, class I, B -0.0627705
RPL23 ribosomal protein L23 -0.062549
RPS12 ribosomal protein S12 -0.0612833
GOLGA4 golgin A4 -0.0577726
TSC22D2 TSC22 domain family, member 2 -0.057125
ZFAND3 zinc finger, AN1-type domain 3 -0.0537289
ATP13A3 ATPase type 13A3 -0.0534348
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.052204
WTAP Wilms tumor 1 associated protein -0.0517751
NT5C2 5'-nucleotidase, cytosolic II -0.0517635
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0512411
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0508526
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0507239
PHIP pleckstrin homology domain interacting protein -0.049874
QKI QKI, KH domain containing, RNA binding -0.0489791
PCBP2 poly(rC) binding protein 2 -0.0483366
OGA O-GlcNAcase -0.0481364
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0478588
SETD5 SET domain containing 5 -0.0468073
RPS24 ribosomal protein S24 -0.0465123
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0462893
ANXA2 annexin A2 -0.0458461
RPS3 ribosomal protein S3 -0.0455199
RPS27A ribosomal protein S27a -0.044793
CENPF centromere protein F, 350/400kDa -0.0447647
RTN4 reticulon 4 -0.0443637
TXNIP thioredoxin interacting protein -0.0441588
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0440679
CCNL1 cyclin L1 -0.0440559
RB1CC1 RB1-inducible coiled-coil 1 -0.0436906
PNRC1 proline-rich nuclear receptor coactivator 1 -0.043674
KDM3A lysine (K)-specific demethylase 3A -0.0431144
VCL vinculin -0.0428411
PRRC2C proline-rich coiled-coil 2C -0.0423501
WSB1 WD repeat and SOCS box containing 1 -0.0418917
RPL35A ribosomal protein L35a -0.041845
PTBP3 polypyrimidine tract binding protein 3 -0.0417916
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0416355
EIF1 eukaryotic translation initiation factor 1 -0.0413687
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0409977
RACK1 receptor for activated C kinase 1 -0.0407296
FLNB filamin B, beta -0.0405474
FNDC3B fibronectin type III domain containing 3B -0.0394108
ENO1 enolase 1, (alpha) -0.0393393
RPS8 ribosomal protein S8 -0.0392032
RPLP2 ribosomal protein, large, P2 -0.0383805
PNISR PNN-interacting serine/arginine-rich protein -0.0375039
WDR45B WD repeat domain 45B -0.0372145
DLG1 discs, large homolog 1 (Drosophila) -0.0370323
MXI1 MAX interactor 1, dimerization protein -0.0367684
KPNB1 karyopherin (importin) beta 1 -0.0365912
HELZ helicase with zinc finger -0.036118
DEK DEK proto-oncogene -0.0357711
RPL9 ribosomal protein L9 -0.0357421
RPL12 ribosomal protein L12 -0.0357299
NPEPPS aminopeptidase puromycin sensitive -0.0355588
SBF2 SET binding factor 2 -0.0354671
RPS23 ribosomal protein S23 -0.0354476
KTN1 kinectin 1 (kinesin receptor) -0.0350746
B2M beta-2-microglobulin -0.0348188
KMT2E lysine (K)-specific methyltransferase 2E -0.0347665
RPL11 ribosomal protein L11 -0.0344875
RPL37A ribosomal protein L37a -0.0341798
RPS4X ribosomal protein S4, X-linked -0.0341495
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0335011
RPLP0 ribosomal protein, large, P0 -0.0330107
ANLN anillin, actin binding protein -0.0329934
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0329577
WAC WW domain containing adaptor with coiled-coil -0.03295
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0328159
BIRC3 baculoviral IAP repeat containing 3 -0.0327489
RBM39 RNA binding motif protein 39 -0.0326953