Sildenafil_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Sildenafil perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Sildenafil_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
APOB apolipoprotein B 0.182663
C3 complement component 3 0.139814
FNDC3B fibronectin type III domain containing 3B 0.131229
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.100575
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0654109
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0650022
FBF1 Fas (TNFRSF6) binding factor 1 0.0649813
AFDN afadin, adherens junction formation factor 0.0634775
ELL2 elongation factor, RNA polymerase II, 2 0.059999
JMJD1C jumonji domain containing 1C 0.0582562
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0555222
SESTD1 SEC14 and spectrin domains 1 0.0543883
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0534213
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0524725
A2M alpha-2-macroglobulin 0.0515751
RBM39 RNA binding motif protein 39 0.0513832
TF transferrin 0.0501286
TXNRD1 thioredoxin reductase 1 0.0495047
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0487764
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0461387
ZFAND3 zinc finger, AN1-type domain 3 0.0461369
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0454705
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0452539
SOD2 superoxide dismutase 2, mitochondrial 0.0452538
GOLGA4 golgin A4 0.0436589
INSIG2 insulin induced gene 2 0.0433825
EEF2 eukaryotic translation elongation factor 2 0.042436
AHSG alpha-2-HS-glycoprotein 0.0422883
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.041363
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0404791
MYO1B myosin IB 0.0399323
NRIP1 nuclear receptor interacting protein 1 0.0394648
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0387329
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) 0.0379506
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0373884
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.0373758
TOP1 topoisomerase (DNA) I 0.0361407
PUM2 pumilio RNA-binding family member 2 0.0359128
DTNA dystrobrevin, alpha 0.0358142
EML4 echinoderm microtubule associated protein like 4 0.0357798
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0354333
AHR aryl hydrocarbon receptor 0.0348935
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0344521
MYH9 myosin, heavy chain 9, non-muscle 0.0327384
KMT2C lysine (K)-specific methyltransferase 2C 0.0327329
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0325801
BIRC6 baculoviral IAP repeat containing 6 0.0325021
SOS1 son of sevenless homolog 1 (Drosophila) 0.0324696
MRTFA myocardin related transcription factor A 0.0324645
RPL3 ribosomal protein L3 0.0324461
PCBP2 poly(rC) binding protein 2 0.0323577
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0323562
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0320832
RTN4 reticulon 4 0.0317111
CRY1 cryptochrome circadian clock 1 0.0306951
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0305637
CCNY cyclin Y 0.0301682
PTK2 protein tyrosine kinase 2 0.0298376
GRK3 G protein-coupled receptor kinase 3 0.0297218
PICALM phosphatidylinositol binding clathrin assembly protein 0.0296522
PTBP3 polypyrimidine tract binding protein 3 0.0296069
ZNF292 zinc finger protein 292 0.0296022
ARHGAP9 Rho GTPase activating protein 9 0.0295361
RICTOR RPTOR independent companion of MTOR, complex 2 0.0295099
BCLAF1 BCL2-associated transcription factor 1 0.0293361
RAB6A RAB6A, member RAS oncogene family 0.029222
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0291107
YAP1 Yes-associated protein 1 0.0290495
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0287738
MED13L mediator complex subunit 13-like 0.0286146
DSTN destrin (actin depolymerizing factor) 0.028596
VEGFA vascular endothelial growth factor A 0.028572
ANKRD10 ankyrin repeat domain 10 0.0284113
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 0.0283411
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0283157
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0282711
HSPH1 heat shock 105kDa/110kDa protein 1 0.0280894
USP3 ubiquitin specific peptidase 3 0.0272886
LRRC1 leucine rich repeat containing 1 0.0271476
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0271397
MEMO1 mediator of cell motility 1 0.0271252
PABPC1 poly(A) binding protein, cytoplasmic 1 0.027118
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0269252
SNX9 sorting nexin 9 0.0268818
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.026783
NUP58 nucleoporin 58 0.0267031
EIF4B eukaryotic translation initiation factor 4B 0.02654
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0263631
WDR45B WD repeat domain 45B 0.0263085
SCAF8 SR-related CTD-associated factor 8 0.0262905
CUL3 cullin 3 0.0261083
QKI QKI, KH domain containing, RNA binding 0.0259779
FCHSD2 FCH and double SH3 domains 2 0.0258845
GPAM glycerol-3-phosphate acyltransferase, mitochondrial 0.0258532
CCNL1 cyclin L1 0.0257856
KIF1B kinesin family member 1B 0.0252922
NAMPT nicotinamide phosphoribosyltransferase 0.025208
USP47 ubiquitin specific peptidase 47 0.0251957
GPBP1 GC-rich promoter binding protein 1 0.0251883
ABI1 abl-interactor 1 0.0251778

decreased expression

Symbol Name Standardized Value
MT2A metallothionein 2A -0.226501
AKAP12 A kinase (PRKA) anchor protein 12 -0.196592
EHBP1 EH domain binding protein 1 -0.149632
GPC6 glypican 6 -0.140952
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.115502
TPT1 tumor protein, translationally-controlled 1 -0.11392
IGF2 insulin-like growth factor 2 -0.101807
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.10018
SLC38A2 solute carrier family 38, member 2 -0.0989839
NPAS2 neuronal PAS domain protein 2 -0.0918479
TIMP1 TIMP metallopeptidase inhibitor 1 -0.081248
MAML2 mastermind-like 2 (Drosophila) -0.0791965
RPLP1 ribosomal protein, large, P1 -0.0781253
SAMD4A sterile alpha motif domain containing 4A -0.0779004
ATXN1 ataxin 1 -0.0730946
FRMD5 FERM domain containing 5 -0.0715183
ASPH aspartate beta-hydroxylase -0.0708791
ZBTB20 zinc finger and BTB domain containing 20 -0.0700104
RNF213 ring finger protein 213 -0.0681213
FN1 fibronectin 1 -0.0676799
IGFBP1 insulin-like growth factor binding protein 1 -0.0668797
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0635924
PDLIM5 PDZ and LIM domain 5 -0.056474
FAM107B family with sequence similarity 107, member B -0.0505948
GMDS GDP-mannose 4,6-dehydratase -0.0490016
TMSB10 thymosin beta 10 -0.0486849
RPL26 ribosomal protein L26 -0.0484067
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0474347
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0471054
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0457695
DST dystonin -0.0453692
RIGI RNA sensor RIG-I -0.0442003
RPL37A ribosomal protein L37a -0.0434239
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 -0.0432507
RPS19 ribosomal protein S19 -0.0430338
PDGFB platelet-derived growth factor beta polypeptide -0.0430337
INTS6 integrator complex subunit 6 -0.0428069
RPS24 ribosomal protein S24 -0.042584
VCL vinculin -0.0425015
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0417887
PTCHD4 patched domain containing 4 -0.0416516
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0415766
ATP10A ATPase, class V, type 10A -0.0414375
RPL11 ribosomal protein L11 -0.0405641
LOC112694756 uncharaterized LOC112694756 -0.0405541
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0403025
EXT1 exostosin glycosyltransferase 1 -0.0396206
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0388651
RPS27A ribosomal protein S27a -0.0385023
FTL ferritin, light polypeptide -0.0381214
RPLP2 ribosomal protein, large, P2 -0.0379106
PEG3 paternally expressed 3 -0.0374555
GK glycerol kinase -0.0367833
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0359075
H1-0 H1.0 linker histone -0.0356142
RPL23 ribosomal protein L23 -0.0341673
RPS21 ribosomal protein S21 -0.0341138
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 -0.0340906
RPL32 ribosomal protein L32 -0.032962
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0321602
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0320435
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0318879
DSPP dentin sialophosphoprotein -0.0311763
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0311662
ACTG1 actin gamma 1 -0.0311138
KIAA1217 KIAA1217 -0.031046
PLXDC2 plexin domain containing 2 -0.0296848
DHRS2 dehydrogenase/reductase (SDR family) member 2 -0.029097
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0288118
TBC1D22A TBC1 domain family, member 22A -0.0284412
DOCK4 dedicator of cytokinesis 4 -0.0283569
RAD51B RAD51 paralog B -0.0280639
RPS12 ribosomal protein S12 -0.0277905
RPL38 ribosomal protein L38 -0.0277126
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0276758
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0275778
DNAH17 dynein, axonemal, heavy chain 17 -0.0275331
ZMYND8 zinc finger, MYND-type containing 8 -0.0273921
HPCAL1 hippocalcin-like 1 -0.0271115
RPL12 ribosomal protein L12 -0.026848
MYO1E myosin IE -0.0264432
HDAC4 histone deacetylase 4 -0.0264
AHNAK AHNAK nucleoprotein -0.0261547
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0261421
APOC1 apolipoprotein C-I -0.0258841
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.025788
MT1X metallothionein 1X -0.0257622
EGR1 early growth response 1 -0.0257532
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 -0.025722
TNFSF14 tumor necrosis factor (ligand) superfamily, member 14 -0.0255905
RPS6 ribosomal protein S6 -0.0255754
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 -0.025531
PTPRK protein tyrosine phosphatase, receptor type, K -0.025477
RPL37 ribosomal protein L37 -0.0254541
MALRD1 MAM and LDL receptor class A domain containing 1 -0.0253622
AGO2 argonaute RISC catalytic component 2 -0.0251697
SOX4 SRY (sex determining region Y)-box 4 -0.024919
TXNIP thioredoxin interacting protein -0.0247634
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0245132
IER3 immediate early response 3 -0.0244019