Sildenafil_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Sildenafil perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Sildenafil_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DST dystonin 0.127532
TP63 tumor protein p63 0.11641
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.107052
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.104259
CD44 CD44 molecule (Indian blood group) 0.0951916
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0922185
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0888357
FMNL2 formin-like 2 0.0821474
DLG1 discs, large homolog 1 (Drosophila) 0.0802805
ZDHHC14 zinc finger, DHHC-type containing 14 0.0784396
PSD3 pleckstrin and Sec7 domain containing 3 0.0768078
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0744659
EFNA5 ephrin-A5 0.0710798
EHBP1 EH domain binding protein 1 0.06989
CADM2 cell adhesion molecule 2 0.0658617
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0614209
TSC22D1 TSC22 domain family, member 1 0.060952
TNS3 tensin 3 0.057936
DPYD dihydropyrimidine dehydrogenase 0.0577819
TRIO trio Rho guanine nucleotide exchange factor 0.0558023
EPHA4 EPH receptor A4 0.0528719
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0520878
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0513624
RUNX1 runt-related transcription factor 1 0.0506279
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0496215
CFAP299 cilia and flagella associated protein 299 0.0486529
RAD51B RAD51 paralog B 0.0480568
CMIP c-Maf inducing protein 0.046767
DNER delta/notch-like EGF repeat containing 0.0436322
EXOC4 exocyst complex component 4 0.0434163
MACF1 microtubule-actin crosslinking factor 1 0.0428882
APP amyloid beta (A4) precursor protein 0.0428306
PDE10A phosphodiesterase 10A 0.0424776
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0417889
HDAC9 histone deacetylase 9 0.0416326
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0412212
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0408037
LPP LIM domain containing preferred translocation partner in lipoma 0.0391003
PTK2 protein tyrosine kinase 2 0.0380482
RNF213 ring finger protein 213 0.0373652
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0370733
PTPRF protein tyrosine phosphatase, receptor type, F 0.0368784
BCAR3 breast cancer anti-estrogen resistance 3 0.035421
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0353635
DENND1A DENN/MADD domain containing 1A 0.0343382
MBNL2 muscleblind-like splicing regulator 2 0.0340754
ERRFI1 ERBB receptor feedback inhibitor 1 0.0330752
CSMD3 CUB and Sushi multiple domains 3 0.0329372
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0329302
TTC28 tetratricopeptide repeat domain 28 0.0318233
RIGI RNA sensor RIG-I 0.0311818
FNIP1 folliculin interacting protein 1 0.0309592
MTCL1 microtubule crosslinking factor 1 0.0308219
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0291433
PLK2 polo-like kinase 2 0.0283275
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0282417
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0280907
DOCK11 dedicator of cytokinesis 11 0.0279329
FAF1 Fas (TNFRSF6) associated factor 1 0.0273074
SP100 SP100 nuclear antigen 0.0266742
MYOF myoferlin 0.026498
YEATS2 YEATS domain containing 2 0.0262369
PRELID2 PRELI domain containing 2 0.0257317
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0256328
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0255672
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.025276
EGFR epidermal growth factor receptor 0.0250323
RASAL2 RAS protein activator like 2 0.024963
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0248021
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0246549
COL5A2 collagen, type V, alpha 2 0.0241655
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.023831
ENO2 enolase 2 (gamma, neuronal) 0.0233047
ZCCHC7 zinc finger, CCHC domain containing 7 0.0231967
PATJ PATJ crumbs cell polarity complex component 0.0230006
SMYD3 SET and MYND domain containing 3 0.0226711
ESYT2 extended synaptotagmin-like protein 2 0.022447
DOCK1 dedicator of cytokinesis 1 0.0222293
KDM4C lysine (K)-specific demethylase 4C 0.0221497
MBD5 methyl-CpG binding domain protein 5 0.0210764
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0209555
CLIP2 CAP-GLY domain containing linker protein 2 0.0207913
TTC3 tetratricopeptide repeat domain 3 0.0207268
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0205788
AEBP2 AE binding protein 2 0.0205512
CUX1 cut-like homeobox 1 0.0204545
WDR27 WD repeat domain 27 0.0204426
LYST lysosomal trafficking regulator 0.0202984
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) 0.0200408
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0199276
PDGFC platelet derived growth factor C 0.0197615
ANKIB1 ankyrin repeat and IBR domain containing 1 0.0196585
CDK6 cyclin-dependent kinase 6 0.01958
SRSF1 serine/arginine-rich splicing factor 1 0.0195651
NAV2 neuron navigator 2 0.0194016
SRSF11 serine/arginine-rich splicing factor 11 0.0193965
ADARB1 adenosine deaminase, RNA-specific, B1 0.0193414
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0192733
SDK1 sidekick cell adhesion molecule 1 0.0191753
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.019147

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.399436
VIM vimentin -0.244017
MT2A metallothionein 2A -0.176582
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.139629
TMSB10 thymosin beta 10 -0.123243
LOC112694756 uncharaterized LOC112694756 -0.081102
ACTG1 actin gamma 1 -0.0628368
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0577754
TXNRD1 thioredoxin reductase 1 -0.0561265
TMSB4X thymosin beta 4, X-linked -0.0552101
RPL35A ribosomal protein L35a -0.0537329
MT1E metallothionein 1E -0.0511558
EIF1 eukaryotic translation initiation factor 1 -0.0507975
TPT1 tumor protein, translationally-controlled 1 -0.0475239
TM4SF1 transmembrane 4 L six family member 1 -0.0472138
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0437755
RPL23 ribosomal protein L23 -0.0434497
FTL ferritin, light polypeptide -0.0412504
RPS8 ribosomal protein S8 -0.0397902
MT1X metallothionein 1X -0.0396721
TMEM41B transmembrane protein 41B -0.0395511
EGR1 early growth response 1 -0.038202
KLF6 Kruppel-like factor 6 -0.0375282
SPAG9 sperm associated antigen 9 -0.0361205
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0335254
RTN4 reticulon 4 -0.0329627
RPLP0 ribosomal protein, large, P0 -0.032545
RPLP1 ribosomal protein, large, P1 -0.0316863
S100A6 S100 calcium binding protein A6 -0.0304474
RPL26 ribosomal protein L26 -0.0282491
RPS4X ribosomal protein S4, X-linked -0.0280509
RACK1 receptor for activated C kinase 1 -0.0273728
SRGN serglycin -0.0268101
TNFRSF6B tumor necrosis factor receptor superfamily, member 6b, decoy -0.0265381
GARS1 glycyl-tRNA synthetase 1 -0.0264239
EMP1 epithelial membrane protein 1 -0.0260085
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain -0.0259836
EEF2 eukaryotic translation elongation factor 2 -0.0259192
RPS24 ribosomal protein S24 -0.0254629
UBC ubiquitin C -0.0254578
RPL5 ribosomal protein L5 -0.0254059
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0253952
RPL12 ribosomal protein L12 -0.0252554
WDR45B WD repeat domain 45B -0.0252237
SPRY4 sprouty homolog 4 (Drosophila) -0.0249631
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0249432
YBX1 Y box binding protein 1 -0.0245648
LDHA lactate dehydrogenase A -0.0239632
PTMA prothymosin, alpha -0.0228248
HMGA1 high mobility group AT-hook 1 -0.0225132
PTP4A2 protein tyrosine phosphatase type IVA, member 2 -0.0222366
RPL34 ribosomal protein L34 -0.0219069
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0217516
KMT2E lysine (K)-specific methyltransferase 2E -0.021587
GNAS GNAS complex locus -0.021454
ARF1 ADP-ribosylation factor 1 -0.0213644
S100A10 S100 calcium binding protein A10 -0.0213025
DNTTIP1 deoxynucleotidyltransferase, terminal, interacting protein 1 -0.0210704
TNPO1 transportin 1 -0.0210249
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0209594
GPAT3 glycerol-3-phosphate acyltransferase 3 -0.0209212
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.020869
RPS20 ribosomal protein S20 -0.0202154
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0201901
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0200104
POTEF POTE ankyrin domain family, member F -0.0199366
RPS2 ribosomal protein S2 -0.0198603
WSB1 WD repeat and SOCS box containing 1 -0.0197211
RPL28 ribosomal protein L28 -0.019684
PYGB phosphorylase, glycogen; brain -0.0196246
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0188416
OLA1 Obg-like ATPase 1 -0.0187887
ERCC1 excision repair cross-complementation group 1 -0.0186106
KDM3A lysine (K)-specific demethylase 3A -0.0185453
PAIP2 poly(A) binding protein interacting protein 2 -0.018539
PNRC1 proline-rich nuclear receptor coactivator 1 -0.018466
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0182016
ADAM17 ADAM metallopeptidase domain 17 -0.0181844
RPS27A ribosomal protein S27a -0.0181601
RPL8 ribosomal protein L8 -0.0180157
IFNGR2 interferon gamma receptor 2 (interferon gamma transducer 1) -0.0179391
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0178416
RPS6 ribosomal protein S6 -0.0177654
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0173848
RPS19 ribosomal protein S19 -0.0173841
ETNK1 ethanolamine kinase 1 -0.0171166
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme -0.0170939
RPL32 ribosomal protein L32 -0.0170575
NUP58 nucleoporin 58 -0.0170313
SMC4 structural maintenance of chromosomes 4 -0.0170262
JUN jun proto-oncogene -0.0168113
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0165339
MARCHF6 membrane associated ring-CH-type finger 6 -0.0164618
RPS28 ribosomal protein S28 -0.0164413
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0162837
YBX3 Y box binding protein 3 -0.0161734
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0160527
RPL35 ribosomal protein L35 -0.0159559
RPL9 ribosomal protein L9 -0.0159486
RPL18 ribosomal protein L18 -0.015916