Sildenafil_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Sildenafil perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Sildenafil_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase 0.104323
VGF VGF nerve growth factor inducible 0.084023
KMT2E lysine (K)-specific methyltransferase 2E 0.0837524
PDE4D phosphodiesterase 4D, cAMP-specific 0.0783904
FN1 fibronectin 1 0.0724522
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0706136
GOLGA4 golgin A4 0.0636427
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.063347
HELZ helicase with zinc finger 0.0632071
DST dystonin 0.0581942
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.057931
TRIO trio Rho guanine nucleotide exchange factor 0.0578432
PTK2 protein tyrosine kinase 2 0.0556472
NDRG1 N-myc downstream regulated 1 0.0550853
NBAS neuroblastoma amplified sequence 0.0498889
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0497283
SEC63 SEC63 homolog (S. cerevisiae) 0.0493187
PDE10A phosphodiesterase 10A 0.0457578
SETD5 SET domain containing 5 0.0441523
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.044147
CALR calreticulin 0.0435885
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.042507
NKTR natural killer cell triggering receptor 0.0424544
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0423283
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.041952
CDC73 cell division cycle 73 0.0416782
RTN4 reticulon 4 0.0410292
TFG TRK-fused gene 0.0406085
PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 0.0403035
COL5A2 collagen, type V, alpha 2 0.040245
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0398411
MYOF myoferlin 0.0397297
PNISR PNN-interacting serine/arginine-rich protein 0.0395766
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0389989
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0384018
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0376525
PRELID2 PRELI domain containing 2 0.037449
RNF24 ring finger protein 24 0.0359939
PHF21A PHD finger protein 21A 0.0352069
NAV2 neuron navigator 2 0.0351922
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0350362
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.034823
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0348158
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0347964
MYH9 myosin, heavy chain 9, non-muscle 0.0342504
KDM4C lysine (K)-specific demethylase 4C 0.0341695
FYN FYN proto-oncogene, Src family tyrosine kinase 0.0341232
ANXA5 annexin A5 0.0340129
TPR translocated promoter region, nuclear basket protein 0.033412
ADAM17 ADAM metallopeptidase domain 17 0.0332779
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0329776
AHCTF1 AT hook containing transcription factor 1 0.0323615
PSD3 pleckstrin and Sec7 domain containing 3 0.0318823
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0318783
PCBP3 poly(rC) binding protein 3 0.0317878
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0316992
CANX calnexin 0.0316959
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0316686
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0316162
NFIA nuclear factor I/A 0.0315486
AZIN1 antizyme inhibitor 1 0.0314557
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0314147
ZCCHC7 zinc finger, CCHC domain containing 7 0.0311418
AKAP9 A kinase (PRKA) anchor protein 9 0.0310232
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0309965
ESYT2 extended synaptotagmin-like protein 2 0.0309501
MBNL2 muscleblind-like splicing regulator 2 0.0306779
COPA coatomer protein complex, subunit alpha 0.0306539
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0306066
RYBP RING1 and YY1 binding protein 0.0303993
ITSN1 intersectin 1 (SH3 domain protein) 0.0301631
NGLY1 N-glycanase 1 0.0300474
TBC1D22A TBC1 domain family, member 22A 0.0299837
ATP11B ATPase, class VI, type 11B 0.0299618
ANKRD17 ankyrin repeat domain 17 0.0299051
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0298874
NAP1L1 nucleosome assembly protein 1-like 1 0.0295973
SPAG9 sperm associated antigen 9 0.0294978
APLP2 amyloid beta (A4) precursor-like protein 2 0.0294387
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0293863
SBF2 SET binding factor 2 0.0291905
XRN1 5'-3' exoribonuclease 1 0.0291231
NBEAL1 neurobeachin-like 1 0.0289048
FMN1 formin 1 0.0289017
CXCL8 chemokine (C-X-C motif) ligand 8 0.0287873
ATP11A ATPase, class VI, type 11A 0.0287476
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0285339
UBQLN1 ubiquilin 1 0.0285112
UHMK1 U2AF homology motif (UHM) kinase 1 0.028483
ATP13A3 ATPase type 13A3 0.0284159
MNAT1 MNAT CDK-activating kinase assembly factor 1 0.0283866
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.028212
SEC24A SEC24 family member A 0.0280888
CSNK2A2 casein kinase 2, alpha prime polypeptide 0.028036
CD109 CD109 molecule 0.0279007
COLEC11 collectin sub-family member 11 0.0278054
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0277806
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0277601
USP48 ubiquitin specific peptidase 48 0.027703
CFDP1 craniofacial development protein 1 0.0276552

decreased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 -0.237109
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.147984
LAMB3 laminin, beta 3 -0.145508
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.141085
ATOSA atos homolog A -0.126419
SAMD4A sterile alpha motif domain containing 4A -0.124438
BACE2 beta-site APP-cleaving enzyme 2 -0.12421
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.10624
CEMIP cell migration inducing protein, hyaluronan binding -0.0902132
MAML3 mastermind-like 3 (Drosophila) -0.0896915
TXNRD1 thioredoxin reductase 1 -0.0880693
SVIL supervillin -0.085897
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0823901
ABHD17C abhydrolase domain containing 17C -0.0820811
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.079784
RBM47 RNA binding motif protein 47 -0.0763792
MUC16 mucin 16, cell surface associated -0.0752124
PARD3 par-3 family cell polarity regulator -0.0751716
CAPN2 calpain 2, (m/II) large subunit -0.0739507
KATNBL1 katanin p80 subunit B-like 1 -0.0711312
IGF1R insulin-like growth factor 1 receptor -0.0670534
EZR ezrin -0.0632062
HMGA2 high mobility group AT-hook 2 -0.0622206
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0599677
SLC38A1 solute carrier family 38, member 1 -0.0586949
CSNK1A1 casein kinase 1, alpha 1 -0.0584687
AKAP12 A kinase (PRKA) anchor protein 12 -0.0571642
DOCK5 dedicator of cytokinesis 5 -0.0561004
NCOA2 nuclear receptor coactivator 2 -0.0552943
TJP1 tight junction protein 1 -0.0545912
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0543041
SLC12A6 solute carrier family 12 (potassium/chloride transporter), member 6 -0.0541452
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0517014
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0509494
PPP2R2C protein phosphatase 2, regulatory subunit B, gamma -0.0508376
DSCAM Down syndrome cell adhesion molecule -0.0507495
JMJD1C jumonji domain containing 1C -0.0501813
AHNAK AHNAK nucleoprotein -0.0498555
KCNH8 potassium channel, voltage gated eag related subfamily H, member 8 -0.0489632
ZNF638 zinc finger protein 638 -0.0481316
SOS1 son of sevenless homolog 1 (Drosophila) -0.0476578
CLIP1 CAP-GLY domain containing linker protein 1 -0.0473437
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0464841
MAN2A1 mannosidase, alpha, class 2A, member 1 -0.0461762
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0445412
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.0438832
STC1 stanniocalcin 1 -0.043671
FOXP1 forkhead box P1 -0.0435675
MACC1 metastasis associated in colon cancer 1 -0.043263
MTUS1 microtubule associated tumor suppressor 1 -0.0423638
TPT1 tumor protein, translationally-controlled 1 -0.0420132
BZW1 basic leucine zipper and W2 domains 1 -0.0414989
SAMD12 sterile alpha motif domain containing 12 -0.040209
GRB10 growth factor receptor-bound protein 10 -0.0398864
ANTXR2 anthrax toxin receptor 2 -0.0389869
CMIP c-Maf inducing protein -0.0386664
NT5C2 5'-nucleotidase, cytosolic II -0.0378661
TNRC18 trinucleotide repeat containing 18 -0.0377582
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0377113
TXNIP thioredoxin interacting protein -0.0374468
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0368255
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0367854
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.036657
LAMC2 laminin, gamma 2 -0.0366466
QSOX1 quiescin Q6 sulfhydryl oxidase 1 -0.03663
AHNAK2 AHNAK nucleoprotein 2 -0.0363767
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0363003
MAML2 mastermind-like 2 (Drosophila) -0.0362701
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0361716
ERBIN erbb2 interacting protein -0.0359548
KLF6 Kruppel-like factor 6 -0.0349469
ZNF207 zinc finger protein 207 -0.0346406
LGALS3 lectin, galactoside-binding, soluble, 3 -0.0346327
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0344087
KIF13B kinesin family member 13B -0.0338507
TUSC3 tumor suppressor candidate 3 -0.0338479
PTPRK protein tyrosine phosphatase, receptor type, K -0.0336354
LIMCH1 LIM and calponin homology domains 1 -0.0335327
ITGB4 integrin, beta 4 -0.0334812
DIAPH1 diaphanous-related formin 1 -0.0331852
CDK13 cyclin-dependent kinase 13 -0.0330644
AKAP13 A kinase (PRKA) anchor protein 13 -0.0330016
TBL1X transducin (beta)-like 1X-linked -0.032877
PRKCA protein kinase C, alpha -0.0327829
SIK3 SIK family kinase 3 -0.0325549
EGFR epidermal growth factor receptor -0.0322363
MBD5 methyl-CpG binding domain protein 5 -0.0320843
FOXO1 forkhead box O1 -0.0316502
CCNI cyclin I -0.0316392
MCL1 myeloid cell leukemia 1 -0.0315781
TMSB10 thymosin beta 10 -0.0315059
HPCAL1 hippocalcin-like 1 -0.0311531
ETV6 ets variant 6 -0.0311303
NCOR2 nuclear receptor corepressor 2 -0.030997
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0306433
MCU mitochondrial calcium uniporter -0.0305756
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 -0.0305349
MAFK v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K -0.0302825
BPTF bromodomain PHD finger transcription factor -0.0301284
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 -0.0301074