Sildenafil_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Sildenafil perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Sildenafil_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0734574
THSD4 thrombospondin, type I, domain containing 4 0.0704402
ZCCHC7 zinc finger, CCHC domain containing 7 0.0531802
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0506849
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0480114
TAS2R14 taste receptor, type 2, member 14 0.0447743
MCL1 myeloid cell leukemia 1 0.0428242
PTK2 protein tyrosine kinase 2 0.0420612
SMAD3 SMAD family member 3 0.0393525
FMNL2 formin-like 2 0.0389983
COPA coatomer protein complex, subunit alpha 0.0381213
CCNL1 cyclin L1 0.0380954
UBE2H ubiquitin-conjugating enzyme E2H 0.0380445
PDE10A phosphodiesterase 10A 0.0358514
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0344606
PHF21A PHD finger protein 21A 0.0324467
DENND1A DENN/MADD domain containing 1A 0.0323602
CAMKMT calmodulin-lysine N-methyltransferase 0.0315853
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0309021
TFG TRK-fused gene 0.0295603
FNDC3B fibronectin type III domain containing 3B 0.0289685
ATXN1 ataxin 1 0.0286656
AHNAK AHNAK nucleoprotein 0.0282101
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0278557
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0277997
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0275857
TRIO trio Rho guanine nucleotide exchange factor 0.0273948
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0273813
CAMTA1 calmodulin binding transcription activator 1 0.0273019
AFF3 AF4/FMR2 family, member 3 0.0272811
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0261467
PARD3 par-3 family cell polarity regulator 0.0258727
HMGA2 high mobility group AT-hook 2 0.0253715
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0243588
BRAF B-Raf proto-oncogene, serine/threonine kinase 0.0240141
PUM2 pumilio RNA-binding family member 2 0.0238902
MSI2 musashi RNA-binding protein 2 0.0235808
OSMR oncostatin M receptor 0.0235757
RAD51B RAD51 paralog B 0.0235479
DIDO1 death inducer-obliterator 1 0.0234633
SPRED2 sprouty-related, EVH1 domain containing 2 0.0233647
MCTP1 multiple C2 domains, transmembrane 1 0.0232786
EML4 echinoderm microtubule associated protein like 4 0.0227456
ATP13A3 ATPase type 13A3 0.0222186
RAB1A RAB1A, member RAS oncogene family 0.022208
NCOA7 nuclear receptor coactivator 7 0.0220738
EXOC4 exocyst complex component 4 0.0219394
NF1 neurofibromin 1 0.0215611
SMYD3 SET and MYND domain containing 3 0.0210572
DENND5B DENN/MADD domain containing 5B 0.0209973
VCL vinculin 0.0209104
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0208785
EHBP1 EH domain binding protein 1 0.0207735
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0206775
RNF213 ring finger protein 213 0.0206611
EEF2 eukaryotic translation elongation factor 2 0.0200326
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0196911
TMEM165 transmembrane protein 165 0.019573
SND1 staphylococcal nuclease and tudor domain containing 1 0.0195544
UBAP2L ubiquitin associated protein 2-like 0.0195212
AEBP2 AE binding protein 2 0.0193446
PDE4D phosphodiesterase 4D, cAMP-specific 0.0192671
ITSN1 intersectin 1 (SH3 domain protein) 0.0192466
EXT1 exostosin glycosyltransferase 1 0.0191875
ARB2A ARB2 cotranscriptional regulator A 0.0187389
RBM39 RNA binding motif protein 39 0.0186179
VMP1 vacuole membrane protein 1 0.0185713
DOCK5 dedicator of cytokinesis 5 0.0184743
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.018259
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.0180819
RLIM ring finger protein, LIM domain interacting 0.0178624
FAM168A family with sequence similarity 168, member A 0.0178007
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0177843
FOXJ3 forkhead box J3 0.0176934
KIAA1328 KIAA1328 0.0176844
ZMYM2 zinc finger, MYM-type 2 0.0176679
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0176108
SRSF1 serine/arginine-rich splicing factor 1 0.017582
PICALM phosphatidylinositol binding clathrin assembly protein 0.0175658
WDR43 WD repeat domain 43 0.0173307
ANKRD11 ankyrin repeat domain 11 0.0172501
RPTOR regulatory associated protein of MTOR, complex 1 0.0172131
EIF4B eukaryotic translation initiation factor 4B 0.0170309
CDK17 cyclin-dependent kinase 17 0.0170107
CMSS1 cms1 ribosomal small subunit homolog (yeast) 0.0169483
RAB7A RAB7A, member RAS oncogene family 0.0168632
YAP1 Yes-associated protein 1 0.0167366
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0166364
RREB1 ras responsive element binding protein 1 0.0166334
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0165142
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0164927
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0164918
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0163312
SPPL3 signal peptide peptidase like 3 0.0161867
PRELID2 PRELI domain containing 2 0.0158485
KIRREL1 kirre like nephrin family adhesion molecule 1 0.0157226
ATL2 atlastin GTPase 2 0.0155832
EPAS1 endothelial PAS domain protein 1 0.0155816
AGO2 argonaute RISC catalytic component 2 0.0155474
BIRC6 baculoviral IAP repeat containing 6 0.0155062

decreased expression

Symbol Name Standardized Value
TFPI2 tissue factor pathway inhibitor 2 -0.263194
AKAP12 A kinase (PRKA) anchor protein 12 -0.149018
KTN1 kinectin 1 (kinesin receptor) -0.123582
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.10848
PTMA prothymosin, alpha -0.103148
YBX3 Y box binding protein 3 -0.0913481
RPS8 ribosomal protein S8 -0.0747079
TPI1 triosephosphate isomerase 1 -0.0734429
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.069344
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0668817
RPS3 ribosomal protein S3 -0.0647397
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0643839
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0617458
VIM vimentin -0.0609017
RPL26 ribosomal protein L26 -0.0595008
RPL37 ribosomal protein L37 -0.058157
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0575327
TMSB10 thymosin beta 10 -0.0565207
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.055898
RPS2 ribosomal protein S2 -0.0535413
MKI67 marker of proliferation Ki-67 -0.0525471
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0519222
RPL37A ribosomal protein L37a -0.0483784
RPL12 ribosomal protein L12 -0.0480581
ACTG1 actin gamma 1 -0.0463474
MYL12B myosin, light chain 12B, regulatory -0.0457479
RPS29 ribosomal protein S29 -0.0443262
RPS21 ribosomal protein S21 -0.0442805
RPS12 ribosomal protein S12 -0.0439705
NIPBL Nipped-B homolog (Drosophila) -0.0433432
RPLP1 ribosomal protein, large, P1 -0.0429079
RPLP2 ribosomal protein, large, P2 -0.0424712
RPS15 ribosomal protein S15 -0.0422477
RPL38 ribosomal protein L38 -0.0416585
RPL19 ribosomal protein L19 -0.0411471
EIF5B eukaryotic translation initiation factor 5B -0.0396097
MT2A metallothionein 2A -0.0394364
SET SET nuclear proto-oncogene -0.0394195
EIF1 eukaryotic translation initiation factor 1 -0.0392072
RPS19 ribosomal protein S19 -0.0387019
TXNRD1 thioredoxin reductase 1 -0.0383816
PRRC2C proline-rich coiled-coil 2C -0.0381295
RPS27 ribosomal protein S27 -0.0379979
CENPF centromere protein F, 350/400kDa -0.0379284
RPL23 ribosomal protein L23 -0.0374678
RPS6 ribosomal protein S6 -0.0363941
SMC4 structural maintenance of chromosomes 4 -0.0363678
RPS27A ribosomal protein S27a -0.036162
RPL9 ribosomal protein L9 -0.0353802
RPL7A ribosomal protein L7a -0.0351242
TPT1 tumor protein, translationally-controlled 1 -0.0334977
RPL32 ribosomal protein L32 -0.0332278
RPL5 ribosomal protein L5 -0.0328336
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0327024
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0326672
SEPTIN7 septin 7 -0.0324874
TM4SF1 transmembrane 4 L six family member 1 -0.0322714
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0315071
STC1 stanniocalcin 1 -0.0314909
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0313631
ANKRD12 ankyrin repeat domain 12 -0.0313038
TPM3 tropomyosin 3 -0.0311149
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0309652
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0309137
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0305002
RPL11 ribosomal protein L11 -0.0304929
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0304635
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0304264
HLA-B major histocompatibility complex, class I, B -0.0302185
RPS17 ribosomal protein S17 -0.0301469
RPS10 ribosomal protein S10 -0.0300175
YBX1 Y box binding protein 1 -0.0298393
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.029756
NAP1L1 nucleosome assembly protein 1-like 1 -0.0297049
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0295756
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0294168
RACK1 receptor for activated C kinase 1 -0.0289711
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0288203
PFN1 profilin 1 -0.0286598
WNK1 WNK lysine deficient protein kinase 1 -0.0286246
HSPA8 heat shock 70kDa protein 8 -0.0285061
CBX3 chromobox homolog 3 -0.0278379
SCAF11 SR-related CTD-associated factor 11 -0.0275772
RPLP0 ribosomal protein, large, P0 -0.0275384
IGF2 insulin-like growth factor 2 -0.0275169
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0272622
LDHB lactate dehydrogenase B -0.027247
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0272339
RPL36 ribosomal protein L36 -0.027212
SERBP1 SERPINE1 mRNA binding protein 1 -0.0271139
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0270559
KRT18 keratin 18, type I -0.026808
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0265963
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0264106
CCT3 chaperonin containing TCP1, subunit 3 (gamma) -0.0262765
RB1CC1 RB1-inducible coiled-coil 1 -0.0262347
CAVIN1 caveolae associated protein 1 -0.0261423
RPL28 ribosomal protein L28 -0.0256425
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0248764
RPL30 ribosomal protein L30 -0.0247243