Sildenafil_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Sildenafil perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Sildenafil_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FNDC3B fibronectin type III domain containing 3B 0.176967
NAMPT nicotinamide phosphoribosyltransferase 0.16118
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.131868
TRIO trio Rho guanine nucleotide exchange factor 0.109509
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0856051
PTK2 protein tyrosine kinase 2 0.0850347
PRRC2C proline-rich coiled-coil 2C 0.075556
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0748705
CENPF centromere protein F, 350/400kDa 0.0738317
CD109 CD109 molecule 0.0689858
GOLGA4 golgin A4 0.0665147
DST dystonin 0.0628213
AHR aryl hydrocarbon receptor 0.0624212
SMAD3 SMAD family member 3 0.0615973
FAM13A family with sequence similarity 13, member A 0.0609537
MCTP2 multiple C2 domains, transmembrane 2 0.060307
VIM vimentin 0.0600235
FTH1 ferritin, heavy polypeptide 1 0.0593552
OGA O-GlcNAcase 0.0588669
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0564915
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0561592
EYA1 EYA transcriptional coactivator and phosphatase 1 0.0559467
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0538835
ELL2 elongation factor, RNA polymerase II, 2 0.0534248
ZNF292 zinc finger protein 292 0.0534205
NRIP1 nuclear receptor interacting protein 1 0.0528774
ASPH aspartate beta-hydroxylase 0.0520264
PRELID2 PRELI domain containing 2 0.0497308
MKI67 marker of proliferation Ki-67 0.0488842
RNF145 ring finger protein 145 0.0486834
SMYD3 SET and MYND domain containing 3 0.0484791
FNBP1 formin binding protein 1 0.0483445
HELZ helicase with zinc finger 0.0483054
RICTOR RPTOR independent companion of MTOR, complex 2 0.0475911
AFDN afadin, adherens junction formation factor 0.0465944
SUCO SUN domain containing ossification factor 0.0463887
RB1CC1 RB1-inducible coiled-coil 1 0.0448392
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0447603
KMT2E lysine (K)-specific methyltransferase 2E 0.0446316
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0444811
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0437862
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0434126
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.043095
DOCK5 dedicator of cytokinesis 5 0.0423238
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0422664
SPTBN1 spectrin, beta, non-erythrocytic 1 0.042116
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0407748
EPS8 epidermal growth factor receptor pathway substrate 8 0.0407158
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0405042
MATR3 matrin 3 0.039788
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0394793
MBNL1 muscleblind-like splicing regulator 1 0.0393366
ETV6 ets variant 6 0.0392569
TBC1D22A TBC1 domain family, member 22A 0.0384616
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0383736
VEGFC vascular endothelial growth factor C 0.0377812
YME1L1 YME1-like 1 ATPase 0.0376912
TXNRD1 thioredoxin reductase 1 0.0374518
ANKRD28 ankyrin repeat domain 28 0.0373307
RUNX1 runt-related transcription factor 1 0.0372421
EZR ezrin 0.0369518
JMJD1C jumonji domain containing 1C 0.0366211
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0363335
MACF1 microtubule-actin crosslinking factor 1 0.0359207
SLTM SAFB-like, transcription modulator 0.0357764
NAV2 neuron navigator 2 0.0355713
RPS6 ribosomal protein S6 0.0354531
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0352624
ITGA1 integrin, alpha 1 0.0352477
RTN4 reticulon 4 0.035146
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0349809
COG5 component of oligomeric golgi complex 5 0.0347268
TPM3 tropomyosin 3 0.0344089
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0339498
ESYT2 extended synaptotagmin-like protein 2 0.0333518
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0332173
TXNIP thioredoxin interacting protein 0.0331218
MYH9 myosin, heavy chain 9, non-muscle 0.0330545
CD44 CD44 molecule (Indian blood group) 0.0326615
TPR translocated promoter region, nuclear basket protein 0.0322639
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0322524
GPC6 glypican 6 0.0320453
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0319262
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0316534
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0314811
TFG TRK-fused gene 0.0311111
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0306094
DIAPH3 diaphanous-related formin 3 0.0305897
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0304784
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.030285
ANLN anillin, actin binding protein 0.0302375
SHB Src homology 2 domain containing adaptor protein B 0.029965
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.0296913
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0296178
RBM39 RNA binding motif protein 39 0.0294832
ZNF638 zinc finger protein 638 0.0294649
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0294167
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0289413
ANO6 anoctamin 6 0.0281821
IRAK3 interleukin-1 receptor-associated kinase 3 0.0280979

decreased expression

Symbol Name Standardized Value
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.257978
NRG1 neuregulin 1 -0.253503
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.203073
FN1 fibronectin 1 -0.11229
TMSB10 thymosin beta 10 -0.0726742
HLA-B major histocompatibility complex, class I, B -0.0707049
VCL vinculin -0.0642502
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0517862
INTS6 integrator complex subunit 6 -0.0510196
HMGA2 high mobility group AT-hook 2 -0.050664
TPT1 tumor protein, translationally-controlled 1 -0.0498644
PALLD palladin, cytoskeletal associated protein -0.0471018
AEBP2 AE binding protein 2 -0.045966
SOX4 SRY (sex determining region Y)-box 4 -0.0433866
FTL ferritin, light polypeptide -0.0426101
SQSTM1 sequestosome 1 -0.0409556
PDLIM5 PDZ and LIM domain 5 -0.0402951
B2M beta-2-microglobulin -0.0355127
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0342277
IFI27 interferon, alpha-inducible protein 27 -0.0326772
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0316051
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0301279
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0296661
EGR1 early growth response 1 -0.0296652
ACTG1 actin gamma 1 -0.0290894
NTN4 netrin 4 -0.0290303
RAI14 retinoic acid induced 14 -0.0279973
CANX calnexin -0.0279127
LOC102724023 ES1 protein homolog, mitochondrial -0.0278317
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0273696
HLA-A major histocompatibility complex, class I, A -0.0268121
TFPI2 tissue factor pathway inhibitor 2 -0.0267459
TMSB4X thymosin beta 4, X-linked -0.0263001
S100A6 S100 calcium binding protein A6 -0.0261891
WSB1 WD repeat and SOCS box containing 1 -0.0261115
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0257564
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0253917
RPL31 ribosomal protein L31 -0.025303
AHRR aryl-hydrocarbon receptor repressor -0.0250579
ZNF217 zinc finger protein 217 -0.0250233
BICD1 bicaudal D homolog 1 (Drosophila) -0.0248296
TGFB1 transforming growth factor, beta 1 -0.0248178
SLC38A2 solute carrier family 38, member 2 -0.0245985
GNAS GNAS complex locus -0.0243707
IGFBP3 insulin-like growth factor binding protein 3 -0.0238036
MMP13 matrix metallopeptidase 13 -0.0234785
LRRC23 leucine rich repeat containing 23 -0.0231418
SPDYA speedy/RINGO cell cycle regulator family member A -0.0222645
TENM4 teneurin transmembrane protein 4 -0.0217006
RAB7A RAB7A, member RAS oncogene family -0.0216666
UGDH UDP-glucose 6-dehydrogenase -0.0211093
IFI6 interferon, alpha-inducible protein 6 -0.0203108
CRK v-crk avian sarcoma virus CT10 oncogene homolog -0.0202448
DUSP6 dual specificity phosphatase 6 -0.0198317
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.019585
STC2 stanniocalcin 2 -0.0190773
CCDC138 coiled-coil domain containing 138 -0.0187931
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0186652
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0186018
GLCCI1 glucocorticoid induced 1 -0.0183668
SLC35F3 solute carrier family 35, member F3 -0.0176078
EIF1 eukaryotic translation initiation factor 1 -0.017493
DNAH5 dynein, axonemal, heavy chain 5 -0.0173858
CD63 CD63 molecule -0.0173452
BASP1 brain abundant, membrane attached signal protein 1 -0.0173074
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.0172755
CP ceruloplasmin (ferroxidase) -0.0168002
ACOXL acyl-CoA oxidase-like -0.0167247
PPARA peroxisome proliferator-activated receptor alpha -0.0167171
EPAS1 endothelial PAS domain protein 1 -0.0167117
IL6 interleukin 6 -0.0166187
EFCAB13 EF-hand calcium binding domain 13 -0.0164577
PTMA prothymosin, alpha -0.0163932
BMERB1 bMERB domain containing 1 -0.0162084
LARP1B La ribonucleoprotein domain family, member 1B -0.016132
LY6E lymphocyte antigen 6 complex, locus E -0.0160875
LAMB3 laminin, beta 3 -0.0160686
CADM2 cell adhesion molecule 2 -0.0160419
RAB10 RAB10, member RAS oncogene family -0.0160085
TSHZ2 teashirt zinc finger homeobox 2 -0.0159318
RBM47 RNA binding motif protein 47 -0.0158807
GUCY1A2 guanylate cyclase 1, soluble, alpha 2 -0.0158597
MT2A metallothionein 2A -0.0158394
ZNFX1 zinc finger, NFX1-type containing 1 -0.0153694
MORF4L2 mortality factor 4 like 2 -0.0153491
CTSD cathepsin D -0.0152883
RNF220 ring finger protein 220 -0.0152246
JUN jun proto-oncogene -0.0151829
FAM20C family with sequence similarity 20, member C -0.0150103
TMEM178B transmembrane protein 178B -0.0150077
POU2F2 POU class 2 homeobox 2 -0.0149686
WNK1 WNK lysine deficient protein kinase 1 -0.0148941
RPL35A ribosomal protein L35a -0.0148927
PTPRG protein tyrosine phosphatase, receptor type, G -0.0148328
OSBPL8 oxysterol binding protein-like 8 -0.0145843
RTN3 reticulon 3 -0.0144472
RSU1 Ras suppressor protein 1 -0.0143927
UBAP2 ubiquitin associated protein 2 -0.0143282
RPS28 ribosomal protein S28 -0.014286
RPL23 ribosomal protein L23 -0.014199