Silodosin_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Silodosin perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Silodosin_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.258737
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.232748
FBN1 fibrillin 1 0.137894
COL1A2 collagen, type I, alpha 2 0.0838018
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0836298
PLAT plasminogen activator, tissue 0.0747333
COL3A1 collagen, type III, alpha 1 0.0642778
ATP13A3 ATPase type 13A3 0.0637582
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0610673
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0531788
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0511428
SUCNR1 succinate receptor 1 0.0505749
CD44 CD44 molecule (Indian blood group) 0.0483168
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0469692
GLS2 glutaminase 2 (liver, mitochondrial) 0.0464573
COL5A2 collagen, type V, alpha 2 0.045724
MEIS2 Meis homeobox 2 0.0454408
FNDC3B fibronectin type III domain containing 3B 0.0427793
SOD2 superoxide dismutase 2, mitochondrial 0.0423245
TNIP1 TNFAIP3 interacting protein 1 0.0398869
XPO1 exportin 1 0.0382055
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0381641
DPYSL3 dihydropyrimidinase-like 3 0.0381377
NAMPT nicotinamide phosphoribosyltransferase 0.0364896
GPC6 glypican 6 0.0355098
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0353706
PICALM phosphatidylinositol binding clathrin assembly protein 0.0328943
RNF145 ring finger protein 145 0.03272
RTN4 reticulon 4 0.0316929
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0316732
OPTN optineurin 0.0311106
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0304852
EHBP1 EH domain binding protein 1 0.029904
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0299021
NPR2 natriuretic peptide receptor 2 0.0298486
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0295324
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0294523
USP3 ubiquitin specific peptidase 3 0.0292765
MEF2A myocyte enhancer factor 2A 0.029187
MARCHF6 membrane associated ring-CH-type finger 6 0.0286909
NCKAP1 NCK-associated protein 1 0.0286065
MAP4 microtubule-associated protein 4 0.028604
LAMB1 laminin, beta 1 0.0285276
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0284062
B2M beta-2-microglobulin 0.0284001
ECPAS Ecm29 proteasome adaptor and scaffold 0.0280919
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0280282
GLIS3 GLIS family zinc finger 3 0.0279064
ZNF148 zinc finger protein 148 0.027695
ITM2B integral membrane protein 2B 0.0276901
ITPRID2 ITPR interacting domain containing 2 0.027021
NUP58 nucleoporin 58 0.0270177
ELL2 elongation factor, RNA polymerase II, 2 0.0266506
CYLD cylindromatosis (turban tumor syndrome) 0.0263915
DIRAS3 DIRAS family, GTP-binding RAS-like 3 0.0257401
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.025703
RNF24 ring finger protein 24 0.025647
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0253496
HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 0.0252983
WDR26 WD repeat domain 26 0.0246686
SP3 Sp3 transcription factor 0.0243958
TMEM41B transmembrane protein 41B 0.0241086
IQGAP1 IQ motif containing GTPase activating protein 1 0.0240215
ARHGAP21 Rho GTPase activating protein 21 0.023943
ADAM17 ADAM metallopeptidase domain 17 0.0238316
WWTR1 WW domain containing transcription regulator 1 0.0234325
TBC1D5 TBC1 domain family, member 5 0.023324
USP9X ubiquitin specific peptidase 9, X-linked 0.0228963
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.022832
MYH9 myosin, heavy chain 9, non-muscle 0.0227317
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0226769
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.022578
OGA O-GlcNAcase 0.0224954
PDIA6 protein disulfide isomerase family A, member 6 0.0224594
ZEB2 zinc finger E-box binding homeobox 2 0.0224397
KIFAP3 kinesin-associated protein 3 0.0224217
MICU3 mitochondrial calcium uptake family, member 3 0.0224029
ITGAV integrin, alpha V 0.0223988
CD47 CD47 molecule 0.0221315
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0220739
MAN2A1 mannosidase, alpha, class 2A, member 1 0.0220323
ESYT2 extended synaptotagmin-like protein 2 0.0219952
CCL2 chemokine (C-C motif) ligand 2 0.021723
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0215359
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0213184
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0212862
NBAS neuroblastoma amplified sequence 0.0210781
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0210575
SNX9 sorting nexin 9 0.0210268
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.0209817
TWSG1 twisted gastrulation BMP signaling modulator 1 0.0209272
VMP1 vacuole membrane protein 1 0.0209201
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0208696
SLC44A1 solute carrier family 44 (choline transporter), member 1 0.0208423
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 0.0206495
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0206492
TPR translocated promoter region, nuclear basket protein 0.0205187
BLTP1 bridge-like lipid transfer protein family member 1 0.0204679
RNASE1 ribonuclease, RNase A family, 1 (pancreatic) 0.0203298
CLU clusterin 0.0203189

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.190004
VIM vimentin -0.154846
COL5A1 collagen, type V, alpha 1 -0.148204
IGFBP3 insulin-like growth factor binding protein 3 -0.128402
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.113648
TRIO trio Rho guanine nucleotide exchange factor -0.112561
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.106932
NDRG1 N-myc downstream regulated 1 -0.0953771
SLC39A11 solute carrier family 39, member 11 -0.0917114
CSTB cystatin B (stefin B) -0.0898833
AHNAK AHNAK nucleoprotein -0.0852864
LMNA lamin A/C -0.0834887
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 -0.0790912
LOX lysyl oxidase -0.0774181
ABI3BP ABI family, member 3 (NESH) binding protein -0.0732602
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 -0.0724065
CDH13 cadherin 13 -0.0699077
EGFR epidermal growth factor receptor -0.0680131
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0643236
TMSB10 thymosin beta 10 -0.0642279
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0616134
FBXL7 F-box and leucine-rich repeat protein 7 -0.0602407
MARCKS myristoylated alanine-rich protein kinase C substrate -0.057948
PRELID2 PRELI domain containing 2 -0.0575094
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0523161
FN1 fibronectin 1 -0.0522774
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0521514
HDAC9 histone deacetylase 9 -0.0485866
RIGI RNA sensor RIG-I -0.0483878
RND3 Rho family GTPase 3 -0.0470225
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0445993
FSTL1 follistatin-like 1 -0.0436983
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 -0.0425741
THBS2 thrombospondin 2 -0.0407325
CENPF centromere protein F, 350/400kDa -0.0393519
TPT1 tumor protein, translationally-controlled 1 -0.0384468
ANXA2 annexin A2 -0.0383071
EFNA5 ephrin-A5 -0.0380592
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0368769
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0364537
VCL vinculin -0.0363115
FTL ferritin, light polypeptide -0.0358709
EIF1 eukaryotic translation initiation factor 1 -0.0358444
MT2A metallothionein 2A -0.0356365
FLNA filamin A, alpha -0.0354141
RUNX1 runt-related transcription factor 1 -0.0346816
IFITM3 interferon induced transmembrane protein 3 -0.0340552
MYOF myoferlin -0.0338508
KDM4B lysine (K)-specific demethylase 4B -0.0334493
NAV2 neuron navigator 2 -0.033384
MACF1 microtubule-actin crosslinking factor 1 -0.0333765
INTS6 integrator complex subunit 6 -0.0324038
CANX calnexin -0.0321491
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0318383
BACE2 beta-site APP-cleaving enzyme 2 -0.031836
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit -0.0303084
SDCCAG8 serologically defined colon cancer antigen 8 -0.0302784
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0300427
AEBP2 AE binding protein 2 -0.0297244
RPLP2 ribosomal protein, large, P2 -0.0292659
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0291472
PODXL podocalyxin-like -0.0287528
HS3ST3A1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 -0.0282313
DLG1 discs, large homolog 1 (Drosophila) -0.0279943
ADARB1 adenosine deaminase, RNA-specific, B1 -0.0278748
COL8A1 collagen, type VIII, alpha 1 -0.0277736
HLA-B major histocompatibility complex, class I, B -0.0277722
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0277664
AFF4 AF4/FMR2 family, member 4 -0.0274454
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0273187
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0272298
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0268652
RPL12 ribosomal protein L12 -0.0265275
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0264971
SQSTM1 sequestosome 1 -0.0263439
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough -0.0262857
MAP1B microtubule-associated protein 1B -0.0262107
SORBS2 sorbin and SH3 domain containing 2 -0.0262022
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0257976
RPL23 ribosomal protein L23 -0.02579
RPTOR regulatory associated protein of MTOR, complex 1 -0.0256468
WSB1 WD repeat and SOCS box containing 1 -0.0252325
SEC61G Sec61 gamma subunit -0.0249007
CALR calreticulin -0.0247065
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0246307
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0245469
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0243237
LARP1B La ribonucleoprotein domain family, member 1B -0.024174
ANXA1 annexin A1 -0.0234213
DPYSL2 dihydropyrimidinase-like 2 -0.0230897
SPIRE1 spire-type actin nucleation factor 1 -0.0230435
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) -0.0226282
RPL28 ribosomal protein L28 -0.0226254
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0225602
CAPN2 calpain 2, (m/II) large subunit -0.022432
BHLHE40 basic helix-loop-helix family, member e40 -0.0220567
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 -0.0219595
HLA-C major histocompatibility complex, class I, C -0.0219061
NSD2 nuclear receptor binding SET domain protein 2 -0.0218977
HM13 histocompatibility (minor) 13 -0.021882