Silodosin_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Silodosin perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Silodosin_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL1A2 collagen, type I, alpha 2 0.0898127
COL1A1 collagen, type I, alpha 1 0.0693049
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0657323
MT2A metallothionein 2A 0.0589521
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0547227
CAV1 caveolin 1, caveolae protein, 22kDa 0.0406353
FAT1 FAT atypical cadherin 1 0.0382546
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0369718
UBA6 ubiquitin-like modifier activating enzyme 6 0.035435
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.035025
ADAM10 ADAM metallopeptidase domain 10 0.0323773
PTBP3 polypyrimidine tract binding protein 3 0.0321285
NRG3 neuregulin 3 0.0312886
FXR1 fragile X mental retardation, autosomal homolog 1 0.0308053
CALD1 caldesmon 1 0.0305048
PICALM phosphatidylinositol binding clathrin assembly protein 0.0304495
CSDE1 cold shock domain containing E1, RNA-binding 0.0296996
NALF1 NALCN channel auxiliary factor 1 0.0295994
TPM3 tropomyosin 3 0.0291427
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.028947
UBAC2 UBA domain containing 2 0.0286505
MEF2A myocyte enhancer factor 2A 0.0284282
ANKRD17 ankyrin repeat domain 17 0.0282851
ALCAM activated leukocyte cell adhesion molecule 0.0272534
ETV6 ets variant 6 0.0271604
ABLIM3 actin binding LIM protein family, member 3 0.0265748
FBXL17 F-box and leucine-rich repeat protein 17 0.0265541
GMDS GDP-mannose 4,6-dehydratase 0.0263011
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa 0.0262717
KIF1B kinesin family member 1B 0.0260299
BICC1 BicC family RNA binding protein 1 0.0259284
MSI2 musashi RNA-binding protein 2 0.0254944
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0252823
MX2 MX dynamin-like GTPase 2 0.0252503
SMAD3 SMAD family member 3 0.0247715
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0245262
SETBP1 SET binding protein 1 0.0243184
FUBP1 far upstream element (FUSE) binding protein 1 0.0237022
S100A6 S100 calcium binding protein A6 0.0233127
ATP13A3 ATPase type 13A3 0.0232712
NIPBL Nipped-B homolog (Drosophila) 0.0232266
SH3KBP1 SH3-domain kinase binding protein 1 0.0231583
ITGA6 integrin, alpha 6 0.0231072
LDHA lactate dehydrogenase A 0.0230243
EIF4A2 eukaryotic translation initiation factor 4A2 0.0229375
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0227079
TUBB tubulin, beta class I 0.0226754
AGFG1 ArfGAP with FG repeats 1 0.0225977
ATG10 autophagy related 10 0.0225671
RARB retinoic acid receptor, beta 0.0225262
RAD50 RAD50 homolog (S. cerevisiae) 0.0225023
CD44 CD44 molecule (Indian blood group) 0.0224252
TBK1 TANK-binding kinase 1 0.022351
SNAP25 synaptosomal-associated protein, 25kDa 0.0223163
OASL 2'-5'-oligoadenylate synthetase-like 0.0222921
PLS3 plastin 3 0.0222091
INHBA inhibin, beta A 0.0221411
RBM25 RNA binding motif protein 25 0.022121
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.022108
PSMA6 proteasome (prosome, macropain) subunit, alpha type, 6 0.0220811
TXNRD1 thioredoxin reductase 1 0.022026
ANKRD13C ankyrin repeat domain 13C 0.0219649
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 0.0219547
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 0.0219355
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0219337
ECPAS Ecm29 proteasome adaptor and scaffold 0.0219021
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0217303
THBS1 thrombospondin 1 0.0216991
RPRD2 regulation of nuclear pre-mRNA domain containing 2 0.0213271
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0213119
CSF1 colony stimulating factor 1 (macrophage) 0.021297
VMP1 vacuole membrane protein 1 0.0212917
GSK3B glycogen synthase kinase 3 beta 0.0212841
PRRC2C proline-rich coiled-coil 2C 0.0212114
DPYSL3 dihydropyrimidinase-like 3 0.0211021
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0208432
SRPK2 SRSF protein kinase 2 0.0206456
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.020637
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) 0.0205421
MBTPS2 membrane-bound transcription factor peptidase, site 2 0.0204634
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 0.0203901
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.0203402
TCF12 transcription factor 12 0.020336
NF1 neurofibromin 1 0.0203156
PLSCR1 phospholipid scramblase 1 0.0202944
SLTM SAFB-like, transcription modulator 0.0201233
CCDC14 coiled-coil domain containing 14 0.0200787
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0200529
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0199197
PDZRN3 PDZ domain containing ring finger 3 0.0198464
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0197961
STK17B serine/threonine kinase 17b 0.0197717
HSPB1 heat shock 27kDa protein 1 0.0196003
ZRANB3 zinc finger, RAN-binding domain containing 3 0.0195437
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0195293
CSNK1G3 casein kinase 1, gamma 3 0.0194943
RABGAP1L RAB GTPase activating protein 1-like 0.0194423
GPAT3 glycerol-3-phosphate acyltransferase 3 0.0194328
SPAG9 sperm associated antigen 9 0.0193728
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0193708

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.174982
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.143354
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.142465
VIM vimentin -0.124019
IGFBP3 insulin-like growth factor binding protein 3 -0.122192
COL6A3 collagen, type VI, alpha 3 -0.110772
TGFBI transforming growth factor, beta-induced, 68kDa -0.10966
TIMP3 TIMP metallopeptidase inhibitor 3 -0.108249
TMSB10 thymosin beta 10 -0.107356
CANX calnexin -0.100889
LOX lysyl oxidase -0.0893698
HLA-B major histocompatibility complex, class I, B -0.0879929
NDRG1 N-myc downstream regulated 1 -0.0876901
NRXN3 neurexin 3 -0.0870147
CDH13 cadherin 13 -0.0832115
ERRFI1 ERBB receptor feedback inhibitor 1 -0.079653
AHNAK AHNAK nucleoprotein -0.0767754
FN1 fibronectin 1 -0.0766589
SDC4 syndecan 4 -0.062449
F3 coagulation factor III (thromboplastin, tissue factor) -0.0623245
FAM13A family with sequence similarity 13, member A -0.0603846
COL5A1 collagen, type V, alpha 1 -0.0563584
COL6A2 collagen, type VI, alpha 2 -0.0554845
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0552824
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0548188
STC1 stanniocalcin 1 -0.0545283
AKAP9 A kinase (PRKA) anchor protein 9 -0.0537683
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0528696
CALR calreticulin -0.0526528
HOOK2 hook microtubule-tethering protein 2 -0.049193
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0488807
SPDYA speedy/RINGO cell cycle regulator family member A -0.0485887
LOXL2 lysyl oxidase-like 2 -0.0483125
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0475851
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0474322
EFNA5 ephrin-A5 -0.0469567
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0465504
HM13 histocompatibility (minor) 13 -0.0460833
PRELID2 PRELI domain containing 2 -0.045135
LIMS1 LIM and senescent cell antigen-like domains 1 -0.044329
LMAN1 lectin, mannose-binding, 1 -0.0442701
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0440254
TTC3 tetratricopeptide repeat domain 3 -0.0436671
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0430756
COG6 component of oligomeric golgi complex 6 -0.0427746
MORF4L2 mortality factor 4 like 2 -0.0426096
KMT2C lysine (K)-specific methyltransferase 2C -0.0423649
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0420934
TPT1 tumor protein, translationally-controlled 1 -0.0420836
COL6A1 collagen, type VI, alpha 1 -0.0409974
SEC31A SEC31 homolog A (S. cerevisiae) -0.0397821
GOLGA4 golgin A4 -0.0391636
HDLBP high density lipoprotein binding protein -0.0386843
HLA-C major histocompatibility complex, class I, C -0.0385131
ANKRD11 ankyrin repeat domain 11 -0.0384287
HIP1 huntingtin interacting protein 1 -0.0375767
PRSS23 protease, serine, 23 -0.036936
GOLGB1 golgin B1 -0.036667
PDIA3 protein disulfide isomerase family A, member 3 -0.0362983
TM4SF1 transmembrane 4 L six family member 1 -0.0351624
MARCHF6 membrane associated ring-CH-type finger 6 -0.0349671
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0344669
FBXO11 F-box protein 11 -0.0343755
MYH9 myosin, heavy chain 9, non-muscle -0.0343152
PTGES2 prostaglandin E synthase 2 -0.0343032
CADM1 cell adhesion molecule 1 -0.0330659
BIRC6 baculoviral IAP repeat containing 6 -0.0328752
BACE2 beta-site APP-cleaving enzyme 2 -0.0327
RUNX1 runt-related transcription factor 1 -0.032422
ZNF395 zinc finger protein 395 -0.0323924
HMGA2 high mobility group AT-hook 2 -0.0321015
RAB1A RAB1A, member RAS oncogene family -0.0319532
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0313372
ITCH itchy E3 ubiquitin protein ligase -0.0309862
CALU calumenin -0.0309199
PSD3 pleckstrin and Sec7 domain containing 3 -0.0308776
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0305401
AFF4 AF4/FMR2 family, member 4 -0.0304825
SCFD1 sec1 family domain containing 1 -0.0301993
VEGFA vascular endothelial growth factor A -0.0301177
AKAP12 A kinase (PRKA) anchor protein 12 -0.029884
ELL2 elongation factor, RNA polymerase II, 2 -0.0298831
TRA2A transformer 2 alpha homolog (Drosophila) -0.0297715
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0293879
RPS8 ribosomal protein S8 -0.0293258
HLA-A major histocompatibility complex, class I, A -0.0292257
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0290631
PDIA5 protein disulfide isomerase family A, member 5 -0.0289439
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 -0.028101
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0278549
MCL1 myeloid cell leukemia 1 -0.0277337
RPL31 ribosomal protein L31 -0.0276644
CLTC clathrin, heavy chain (Hc) -0.0267095
PDLIM5 PDZ and LIM domain 5 -0.0266521
TBCA tubulin folding cofactor A -0.026483
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0264471
INTS6 integrator complex subunit 6 -0.0262522
COG5 component of oligomeric golgi complex 5 -0.0261502
CDK13 cyclin-dependent kinase 13 -0.0261414
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0258802